RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 DBN1Q16643 649 aa8.78□□□□□ -1
LINC00616-202ENST00000505874 WDR44Q5JSH3 913 aa8.78□□□□□ -1
LINC00616-202ENST00000505874 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
LINC00616-202ENST00000505874 NFATC2IPQ8NCF5 419 aa8.78□□□□□ -1
LINC00616-202ENST00000505874 ZNF837Q96EG3 531 aaPredicted RBP8.78□□□□□ -1
LINC00616-202ENST00000505874 GPAMQ9HCL2 828 aa8.78□□□□□ -1
LINC00616-202ENST00000505874 SERTAD1Q9UHV2 236 aa8.78□□□□□ -1
LINC00616-202ENST00000505874 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
LINC00616-202ENST00000505874 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
LINC00616-202ENST00000505874 GPR25O00155 361 aa8.77□□□□□ -1.01
LINC00616-202ENST00000505874 C4orf17Q53FE4 359 aa8.77□□□□□ -1.01
LINC00616-202ENST00000505874 NOD1Q9Y239 953 aa8.77□□□□□ -1.01
LINC00616-202ENST00000505874 F11P03951 625 aa8.76□□□□□ -1.01
LINC00616-202ENST00000505874 GTF2IP78347 998 aa8.76□□□□□ -1.01
LINC00616-202ENST00000505874 PSME1Q06323 249 aa8.76□□□□□ -1.01
LINC00616-202ENST00000505874 GTPBP3Q969Y2 492 aaKnown RBP8.76□□□□□ -1.01
LINC00616-202ENST00000505874 UCN2Q96RP3 112 aa8.76□□□□□ -1.01
LINC00616-202ENST00000505874 PCDHGA11Q9Y5H2 935 aa8.76□□□□□ -1.01
LINC00616-202ENST00000505874 TMEM229AB2RXF0 380 aa8.75□□□□□ -1.01
LINC00616-202ENST00000505874 GAS6Q14393 721 aa8.75□□□□□ -1.01
LINC00616-202ENST00000505874 TBC1D9Q6ZT07 1266 aa8.75□□□□□ -1.01
LINC00616-202ENST00000505874 PPARGC1BQ86YN6 1023 aaKnown RBP8.75□□□□□ -1.01
LINC00616-202ENST00000505874 FNBP4Q8N3X1 1017 aaPredicted RBP8.75□□□□□ -1.01
LINC00616-202ENST00000505874 H7C1W4 665 aa8.74□□□□□ -1.01
LINC00616-202ENST00000505874 SMTNP53814 917 aa8.74□□□□□ -1.01
LINC00616-202ENST00000505874 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
LINC00616-202ENST00000505874 RHBDD1Q8TEB9 315 aa8.74□□□□□ -1.01
LINC00616-202ENST00000505874 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
LINC00616-202ENST00000505874 NUCKS1Q9H1E3 243 aaKnown RBP8.74□□□□□ -1.01
LINC00616-202ENST00000505874 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
LINC00616-202ENST00000505874 USP17L3A6NCW0 530 aa8.73□□□□□ -1.01
LINC00616-202ENST00000505874 USP17L4A6NCW7 530 aa8.73□□□□□ -1.01
LINC00616-202ENST00000505874 LZTS3O60299 673 aaPredicted RBP8.73□□□□□ -1.01
LINC00616-202ENST00000505874 PLA2G4AP47712 749 aa8.73□□□□□ -1.01
LINC00616-202ENST00000505874 USP17L2Q6R6M4 530 aa8.73□□□□□ -1.01
LINC00616-202ENST00000505874 USP17L1Q7RTZ2 530 aa8.73□□□□□ -1.01
LINC00616-202ENST00000505874 GLMNQ92990 594 aa8.73□□□□□ -1.01
LINC00616-202ENST00000505874 MSX1P28360 303 aa8.72□□□□□ -1.01
LINC00616-202ENST00000505874 ATP9BO43861 1147 aa8.71□□□□□ -1.02
LINC00616-202ENST00000505874 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC00616-202ENST00000505874 WHAMMQ8TF30 809 aa8.71□□□□□ -1.02
LINC00616-202ENST00000505874 TRERF1Q96PN7 1200 aa8.71□□□□□ -1.02
LINC00616-202ENST00000505874 RUBCNLQ9H714 662 aa8.71□□□□□ -1.02
LINC00616-202ENST00000505874 A6NJR5 290 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 A6NJY4 79 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 ADAMTS2O95450 1211 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 THBS1P07996 1170 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 CSB-PGBD3P0DP91 1061 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 PGBD3Q8N328 593 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 SVOPQ8N4V2 548 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
LINC00616-202ENST00000505874 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
LINC00616-202ENST00000505874 SLURP2P0DP57 97 aa8.69□□□□□ -1.02
LINC00616-202ENST00000505874 ZNF385CQ66K41 422 aaPredicted RBP8.69□□□□□ -1.02
LINC00616-202ENST00000505874 TRIM50Q86XT4 487 aa8.69□□□□□ -1.02
LINC00616-202ENST00000505874 PLEKHM2Q8IWE5 1019 aa8.69□□□□□ -1.02
LINC00616-202ENST00000505874 AIDAQ96BJ3 306 aa8.69□□□□□ -1.02
LINC00616-202ENST00000505874 ZNF358Q9NW07 568 aa8.69□□□□□ -1.02
LINC00616-202ENST00000505874 CLDN10P78369 228 aa8.68□□□□□ -1.02
LINC00616-202ENST00000505874 SRSF11Q05519 484 aaKnown RBP8.68□□□□□ -1.02
LINC00616-202ENST00000505874 TPCN2Q8NHX9 752 aa8.68□□□□□ -1.02
LINC00616-202ENST00000505874 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
LINC00616-202ENST00000505874 TFIP11Q9UBB9 837 aaKnown RBP8.68□□□□□ -1.02
LINC00616-202ENST00000505874 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
LINC00616-202ENST00000505874 KIAA1024Q9UPX6 916 aa8.68□□□□□ -1.02
LINC00616-202ENST00000505874 CDK2AP1O14519 115 aa8.67□□□□□ -1.02
LINC00616-202ENST00000505874 BACH1O14867 736 aa8.67□□□□□ -1.02
LINC00616-202ENST00000505874 MTFR1Q15390 333 aa8.67□□□□□ -1.02
LINC00616-202ENST00000505874 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
LINC00616-202ENST00000505874 DNAAF2Q9NVR5 837 aaKnown RBP8.67□□□□□ -1.02
LINC00616-202ENST00000505874 CABP1Q9NZU7 370 aa8.67□□□□□ -1.02
LINC00616-202ENST00000505874 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
LINC00616-202ENST00000505874 IGF1RP08069 1367 aa8.66□□□□□ -1.02
LINC00616-202ENST00000505874 ATP1A2P50993 1020 aa8.66□□□□□ -1.02
LINC00616-202ENST00000505874 EFHC2Q5JST6 749 aa8.66□□□□□ -1.02
LINC00616-202ENST00000505874 ZNF295-AS1Q8N0V1 137 aa8.66□□□□□ -1.02
LINC00616-202ENST00000505874 OGFOD1Q8N543 542 aa8.66□□□□□ -1.02
LINC00616-202ENST00000505874 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
LINC00616-202ENST00000505874 ZBTB7BO15156 539 aaPredicted RBP8.65□□□□□ -1.02
LINC00616-202ENST00000505874 MX2P20592 715 aa8.65□□□□□ -1.02
LINC00616-202ENST00000505874 ATP4AP20648 1035 aa8.65□□□□□ -1.02
LINC00616-202ENST00000505874 CCDC102BQ68D86 513 aa8.65□□□□□ -1.02
LINC00616-202ENST00000505874 LYPD4Q6UWN0 246 aa8.65□□□□□ -1.02
LINC00616-202ENST00000505874 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
LINC00616-202ENST00000505874 ZNF594Q96JF6 807 aaPredicted RBP8.65□□□□□ -1.02
LINC00616-202ENST00000505874 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
LINC00616-202ENST00000505874 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
LINC00616-202ENST00000505874 TBCELQ5QJ74 424 aa8.64□□□□□ -1.03
LINC00616-202ENST00000505874 CRISPLD1Q9H336 500 aa8.64□□□□□ -1.03
LINC00616-202ENST00000505874 SCHIP1Q9P0W5 487 aaPredicted RBP8.64□□□□□ -1.03
LINC00616-202ENST00000505874 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
LINC00616-202ENST00000505874 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
LINC00616-202ENST00000505874 UBAP2LQ14157 1087 aaKnown RBP8.63□□□□□ -1.03
LINC00616-202ENST00000505874 LBRQ14739 615 aaKnown RBP8.63□□□□□ -1.03
LINC00616-202ENST00000505874 ARSJQ5FYB0 599 aaPredicted RBP8.63□□□□□ -1.03
LINC00616-202ENST00000505874 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
LINC00616-202ENST00000505874 ABHD17AQ96GS6 310 aa8.63□□□□□ -1.03
LINC00616-202ENST00000505874 CFHR5Q9BXR6 569 aa8.63□□□□□ -1.03
LINC00616-202ENST00000505874 ZNF777Q9ULD5 760 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms