RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 ATG3Q9NT62 314 aa23.38■■□□□ 1.33
DDR1-257ENST00000505534 MMP10P09238 476 aa23.37■■□□□ 1.33
DDR1-257ENST00000505534 POLKQ9UBT6 870 aa23.37■■□□□ 1.33
DDR1-257ENST00000505534 CICQ96RK0 1608 aaPredicted RBP23.37■■□□□ 1.33
DDR1-257ENST00000505534 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
DDR1-257ENST00000505534 KIF3CO14782 793 aa23.35■■□□□ 1.33
DDR1-257ENST00000505534 TGFB2P61812 414 aa23.35■■□□□ 1.33
DDR1-257ENST00000505534 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
DDR1-257ENST00000505534 RTCBQ9Y3I0 505 aaKnown RBP23.35■■□□□ 1.33
DDR1-257ENST00000505534 PLEKHG2Q9H7P9 1386 aa23.35■■□□□ 1.33
DDR1-257ENST00000505534 ZNF831Q5JPB2 1677 aa23.35■■□□□ 1.33
DDR1-257ENST00000505534 NLGN1Q8N2Q7 840 aa23.34■■□□□ 1.33
DDR1-257ENST00000505534 KIAA1551Q9HCM1 1747 aa23.33■■□□□ 1.33
DDR1-257ENST00000505534 PXDNLA1KZ92 1463 aa23.32■■□□□ 1.32
DDR1-257ENST00000505534 ERVV-2B6SEH9 535 aa23.32■■□□□ 1.32
DDR1-257ENST00000505534 EIF4A2Q14240 407 aaKnown RBP23.32■■□□□ 1.32
DDR1-257ENST00000505534 KDRP35968 1356 aa23.31■■□□□ 1.32
DDR1-257ENST00000505534 ADRA2BP18089 450 aa23.31■■□□□ 1.32
DDR1-257ENST00000505534 RC3H1Q5TC82 1133 aaKnown RBP23.31■■□□□ 1.32
DDR1-257ENST00000505534 HSP90AB1P08238 724 aaKnown RBP23.3■■□□□ 1.32
DDR1-257ENST00000505534 RBM42Q9BTD8 480 aaKnown RBP23.3■■□□□ 1.32
DDR1-257ENST00000505534 BCS1LQ9Y276 419 aa23.3■■□□□ 1.32
DDR1-257ENST00000505534 COL5A3P25940 1745 aaPredicted RBP23.3■■□□□ 1.32
DDR1-257ENST00000505534 A0A0G2JLW4 131 aa23.29■■□□□ 1.32
DDR1-257ENST00000505534 ARHGEF1Q92888 912 aaKnown RBP23.29■■□□□ 1.32
DDR1-257ENST00000505534 DCAF5Q96JK2 942 aa23.29■■□□□ 1.32
DDR1-257ENST00000505534 SLC4A9Q96Q91 983 aa23.29■■□□□ 1.32
DDR1-257ENST00000505534 MYH14Q7Z406 1995 aaKnown RBP23.29■■□□□ 1.32
DDR1-257ENST00000505534 BRCA1P38398 1863 aaKnown RBP23.28■■□□□ 1.32
DDR1-257ENST00000505534 C10orf71Q711Q0 1435 aa23.28■■□□□ 1.32
DDR1-257ENST00000505534 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
DDR1-257ENST00000505534 CCDC87Q9NVE4 849 aa23.28■■□□□ 1.32
DDR1-257ENST00000505534 CNTNAP4Q9C0A0 1308 aa23.28■■□□□ 1.32
DDR1-257ENST00000505534 C4AP0C0L4 1744 aa23.27■■□□□ 1.32
DDR1-257ENST00000505534 RPS6KA4O75676 772 aa23.26■■□□□ 1.31
DDR1-257ENST00000505534 GYS1P13807 737 aa23.26■■□□□ 1.31
DDR1-257ENST00000505534 RFC4P35249 363 aa23.26■■□□□ 1.31
DDR1-257ENST00000505534 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
DDR1-257ENST00000505534 APLP1P51693 650 aa23.26■■□□□ 1.31
DDR1-257ENST00000505534 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
DDR1-257ENST00000505534 PARP3Q9Y6F1 533 aa23.26■■□□□ 1.31
DDR1-257ENST00000505534 TOMM70O94826 608 aa23.25■■□□□ 1.31
DDR1-257ENST00000505534 ARHGAP27Q6ZUM4 889 aa23.25■■□□□ 1.31
DDR1-257ENST00000505534 ARFGEF1Q9Y6D6 1849 aa23.24■■□□□ 1.31
DDR1-257ENST00000505534 DPEP1P16444 411 aa23.24■■□□□ 1.31
DDR1-257ENST00000505534 TIMELESSQ9UNS1 1208 aa23.24■■□□□ 1.31
DDR1-257ENST00000505534 FCHSD2O94868 740 aa23.23■■□□□ 1.31
DDR1-257ENST00000505534 CABP4P57796 275 aa23.23■■□□□ 1.31
DDR1-257ENST00000505534 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
DDR1-257ENST00000505534 ZNF530Q6P9A1 599 aaPredicted RBP23.21■■□□□ 1.31
DDR1-257ENST00000505534 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
DDR1-257ENST00000505534 KDM6AO15550 1401 aaPredicted RBP23.2■■□□□ 1.3
DDR1-257ENST00000505534 KCNA3P22001 575 aa23.19■■□□□ 1.3
DDR1-257ENST00000505534 MTHFSP49914 203 aa23.19■■□□□ 1.3
DDR1-257ENST00000505534 DNAJC5GQ8N7S2 189 aa23.18■■□□□ 1.3
DDR1-257ENST00000505534 NMRK2Q9NPI5 230 aa23.18■■□□□ 1.3
DDR1-257ENST00000505534 PTCD1O75127 700 aaKnown RBP23.17■■□□□ 1.3
DDR1-257ENST00000505534 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
DDR1-257ENST00000505534 PIM2Q9P1W9 311 aa23.17■■□□□ 1.3
DDR1-257ENST00000505534 CRKLP46109 303 aaKnown RBP23.16■■□□□ 1.3
DDR1-257ENST00000505534 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
DDR1-257ENST00000505534 NFATC2IPQ8NCF5 419 aa23.15■■□□□ 1.3
DDR1-257ENST00000505534 SBF1O95248 1867 aa23.14■■□□□ 1.29
DDR1-257ENST00000505534 RBM46Q8TBY0 533 aaKnown RBP23.14■■□□□ 1.29
DDR1-257ENST00000505534 PANK3Q9H999 370 aa23.14■■□□□ 1.29
DDR1-257ENST00000505534 SRP68Q9UHB9 627 aaKnown RBP23.14■■□□□ 1.29
DDR1-257ENST00000505534 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
DDR1-257ENST00000505534 FKBP8Q14318 412 aa23.13■■□□□ 1.29
DDR1-257ENST00000505534 DALRD3Q5D0E6 543 aaKnown RBP23.13■■□□□ 1.29
DDR1-257ENST00000505534 C16orf71Q8IYS4 520 aaPredicted RBP23.13■■□□□ 1.29
DDR1-257ENST00000505534 SCN11AQ9UI33 1791 aa23.13■■□□□ 1.29
DDR1-257ENST00000505534 TJP1Q07157 1748 aa23.12■■□□□ 1.29
DDR1-257ENST00000505534 AEBP1Q8IUX7 1158 aa23.12■■□□□ 1.29
DDR1-257ENST00000505534 WDR90Q96KV7 1748 aa23.12■■□□□ 1.29
DDR1-257ENST00000505534 DDR1Q08345 913 aa23.11■■□□□ 1.29
DDR1-257ENST00000505534 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
DDR1-257ENST00000505534 MORC1Q86VD1 984 aa23.1■■□□□ 1.29
DDR1-257ENST00000505534 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
DDR1-257ENST00000505534 FSTL1Q12841 308 aa23.09■■□□□ 1.29
DDR1-257ENST00000505534 INTS5Q6P9B9 1019 aaKnown RBP23.09■■□□□ 1.29
DDR1-257ENST00000505534 TM4SF1P30408 202 aa23.08■■□□□ 1.29
DDR1-257ENST00000505534 RNF181Q9P0P0 153 aa23.08■■□□□ 1.29
DDR1-257ENST00000505534 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
DDR1-257ENST00000505534 POLRMTO00411 1230 aaKnown RBP23.07■■□□□ 1.28
DDR1-257ENST00000505534 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
DDR1-257ENST00000505534 KCPQ6ZWJ8 1503 aa23.07■■□□□ 1.28
DDR1-257ENST00000505534 CLSPNQ9HAW4 1339 aa23.07■■□□□ 1.28
DDR1-257ENST00000505534 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
DDR1-257ENST00000505534 ZPR1O75312 459 aa23.06■■□□□ 1.28
DDR1-257ENST00000505534 CHRNA5P30532 468 aa23.06■■□□□ 1.28
DDR1-257ENST00000505534 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
DDR1-257ENST00000505534 TNRC6CQ9HCJ0 1690 aaKnown RBP23.05■■□□□ 1.28
DDR1-257ENST00000505534 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
DDR1-257ENST00000505534 IL13P35225 146 aa23.04■■□□□ 1.28
DDR1-257ENST00000505534 USPL1Q5W0Q7 1092 aa23.04■■□□□ 1.28
DDR1-257ENST00000505534 KLRG1Q96E93 195 aa23.04■■□□□ 1.28
DDR1-257ENST00000505534 RRAGCQ9HB90 399 aa23.04■■□□□ 1.28
DDR1-257ENST00000505534 HSPA5P11021 654 aaKnown RBP23.03■■□□□ 1.28
DDR1-257ENST00000505534 DNAJC10Q8IXB1 793 aa23.03■■□□□ 1.28
DDR1-257ENST00000505534 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms