RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CHD4Q14839 1912 aa27.16■■□□□ 1.94
UBE2D3-220ENST00000505307 KDRP35968 1356 aa27.15■■□□□ 1.94
UBE2D3-220ENST00000505307 IL13P35225 146 aa27.15■■□□□ 1.94
UBE2D3-220ENST00000505307 C1orf141Q5JVX7 400 aa27.15■■□□□ 1.94
UBE2D3-220ENST00000505307 SULT6B1Q6IMI4 303 aa27.15■■□□□ 1.94
UBE2D3-220ENST00000505307 PHF14O94880 888 aa27.14■■□□□ 1.94
UBE2D3-220ENST00000505307 CABP4P57796 275 aa27.14■■□□□ 1.94
UBE2D3-220ENST00000505307 ITPK1Q13572 414 aa27.14■■□□□ 1.94
UBE2D3-220ENST00000505307 AEBP1Q8IUX7 1158 aa27.14■■□□□ 1.94
UBE2D3-220ENST00000505307 UBR3Q6ZT12 1888 aa27.13■■□□□ 1.93
UBE2D3-220ENST00000505307 MTHFSP49914 203 aa27.13■■□□□ 1.93
UBE2D3-220ENST00000505307 ZNF784Q8NCA9 323 aaPredicted RBP27.13■■□□□ 1.93
UBE2D3-220ENST00000505307 GNPATO15228 680 aa27.12■■□□□ 1.93
UBE2D3-220ENST00000505307 PER1O15534 1290 aaPredicted RBP27.12■■□□□ 1.93
UBE2D3-220ENST00000505307 GRIN3BO60391 1043 aa27.12■■□□□ 1.93
UBE2D3-220ENST00000505307 AMIGO3Q86WK7 504 aa27.12■■□□□ 1.93
UBE2D3-220ENST00000505307 KDM6AO15550 1401 aaPredicted RBP27.1■■□□□ 1.93
UBE2D3-220ENST00000505307 RC3H1Q5TC82 1133 aaKnown RBP27.09■■□□□ 1.93
UBE2D3-220ENST00000505307 RBM42Q9BTD8 480 aaKnown RBP27.09■■□□□ 1.93
UBE2D3-220ENST00000505307 ZNF831Q5JPB2 1677 aa27.08■■□□□ 1.93
UBE2D3-220ENST00000505307 RTCBQ9Y3I0 505 aaKnown RBP27.07■■□□□ 1.92
UBE2D3-220ENST00000505307 ADRA2BP18089 450 aa27.06■■□□□ 1.92
UBE2D3-220ENST00000505307 NPC1L1Q9UHC9 1359 aa27.06■■□□□ 1.92
UBE2D3-220ENST00000505307 AKAP4Q5JQC9 854 aa27.05■■□□□ 1.92
UBE2D3-220ENST00000505307 TRAPPC3LQ5T215 181 aa27.05■■□□□ 1.92
UBE2D3-220ENST00000505307 SMIM5Q71RC9 77 aa27.05■■□□□ 1.92
UBE2D3-220ENST00000505307 SLC4A9Q96Q91 983 aa27.05■■□□□ 1.92
UBE2D3-220ENST00000505307 CC2D1BQ5T0F9 858 aaKnown RBP27.04■■□□□ 1.92
UBE2D3-220ENST00000505307 NFATC2IPQ8NCF5 419 aa27.04■■□□□ 1.92
UBE2D3-220ENST00000505307 CNTNAP4Q9C0A0 1308 aa27.04■■□□□ 1.92
UBE2D3-220ENST00000505307 YBX3P16989 372 aaKnown RBP eCLIP27.03■■□□□ 1.92
UBE2D3-220ENST00000505307 GOLGB1Q14789 3259 aaKnown RBP27.02■■□□□ 1.92
UBE2D3-220ENST00000505307 DIAPH1O60610 1272 aaKnown RBP27.02■■□□□ 1.92
UBE2D3-220ENST00000505307 RPS6KA4O75676 772 aa27.01■■□□□ 1.91
UBE2D3-220ENST00000505307 NLGN1Q8N2Q7 840 aa27.01■■□□□ 1.91
UBE2D3-220ENST00000505307 PTCD1O75127 700 aaKnown RBP26.99■■□□□ 1.91
UBE2D3-220ENST00000505307 ARHGEF1Q92888 912 aaKnown RBP26.98■■□□□ 1.91
UBE2D3-220ENST00000505307 MMP10P09238 476 aa26.97■■□□□ 1.91
UBE2D3-220ENST00000505307 HMOX1P09601 288 aa26.97■■□□□ 1.91
UBE2D3-220ENST00000505307 RFC4P35249 363 aa26.97■■□□□ 1.91
UBE2D3-220ENST00000505307 SLC52A2Q9HAB3 445 aa26.97■■□□□ 1.91
UBE2D3-220ENST00000505307 COL5A3P25940 1745 aaPredicted RBP26.96■■□□□ 1.91
UBE2D3-220ENST00000505307 SCN11AQ9UI33 1791 aa26.95■■□□□ 1.9
UBE2D3-220ENST00000505307 RNMTO43148 476 aaKnown RBP26.93■■□□□ 1.9
UBE2D3-220ENST00000505307 CRKLP46109 303 aaKnown RBP26.93■■□□□ 1.9
UBE2D3-220ENST00000505307 LGR6Q9HBX8 967 aa26.92■■□□□ 1.9
UBE2D3-220ENST00000505307 GYS1P13807 737 aa26.91■■□□□ 1.9
UBE2D3-220ENST00000505307 MTHFSDQ2M296 383 aaKnown RBP26.91■■□□□ 1.9
UBE2D3-220ENST00000505307 MRC1P22897 1456 aa26.9■■□□□ 1.9
UBE2D3-220ENST00000505307 TGFB2P61812 414 aa26.9■■□□□ 1.9
UBE2D3-220ENST00000505307 CICQ96RK0 1608 aaPredicted RBP26.9■■□□□ 1.9
UBE2D3-220ENST00000505307 MYH14Q7Z406 1995 aaKnown RBP26.88■■□□□ 1.89
UBE2D3-220ENST00000505307 CCDC87Q9NVE4 849 aa26.88■■□□□ 1.89
UBE2D3-220ENST00000505307 WWC3Q9ULE0 1092 aa26.88■■□□□ 1.89
UBE2D3-220ENST00000505307 PARP3Q9Y6F1 533 aa26.88■■□□□ 1.89
UBE2D3-220ENST00000505307 U2SURPO15042 1029 aaKnown RBP26.87■■□□□ 1.89
UBE2D3-220ENST00000505307 COL3A1P02461 1466 aaPredicted RBP26.87■■□□□ 1.89
UBE2D3-220ENST00000505307 C1QTNF8P60827 252 aa26.86■■□□□ 1.89
UBE2D3-220ENST00000505307 CNGB1Q14028 1251 aaPredicted RBP26.85■■□□□ 1.89
UBE2D3-220ENST00000505307 INTS5Q6P9B9 1019 aaKnown RBP26.85■■□□□ 1.89
UBE2D3-220ENST00000505307 GAS2L2Q8NHY3 880 aa26.85■■□□□ 1.89
UBE2D3-220ENST00000505307 CFAP53Q96M91 514 aa26.85■■□□□ 1.89
UBE2D3-220ENST00000505307 GIGYF1O75420 1035 aaPredicted RBP26.84■■□□□ 1.89
UBE2D3-220ENST00000505307 DNAJC10Q8IXB1 793 aa26.84■■□□□ 1.89
UBE2D3-220ENST00000505307 VSIG10Q8N0Z9 540 aa26.84■■□□□ 1.89
UBE2D3-220ENST00000505307 TJP1Q07157 1748 aa26.84■■□□□ 1.89
UBE2D3-220ENST00000505307 USP42Q9H9J4 1324 aaKnown RBP26.84■■□□□ 1.89
UBE2D3-220ENST00000505307 C10orf71Q711Q0 1435 aa26.83■■□□□ 1.89
UBE2D3-220ENST00000505307 ADAMTS7Q9UKP4 1686 aa26.83■■□□□ 1.89
UBE2D3-220ENST00000505307 KIF13BQ9NQT8 1826 aa26.83■■□□□ 1.89
UBE2D3-220ENST00000505307 SLC39A6Q13433 755 aa26.82■■□□□ 1.88
UBE2D3-220ENST00000505307 C4AP0C0L4 1744 aa26.82■■□□□ 1.88
UBE2D3-220ENST00000505307 PXDNLA1KZ92 1463 aa26.81■■□□□ 1.88
UBE2D3-220ENST00000505307 GNAT3A8MTJ3 354 aa26.81■■□□□ 1.88
UBE2D3-220ENST00000505307 CYP19A1P11511 503 aaPredicted RBP26.81■■□□□ 1.88
UBE2D3-220ENST00000505307 SENP3-EIF4A1A0A087X0R7 540 aa26.8■■□□□ 1.88
UBE2D3-220ENST00000505307 SRP68Q9UHB9 627 aaKnown RBP26.8■■□□□ 1.88
UBE2D3-220ENST00000505307 NUDCQ9Y266 331 aa26.8■■□□□ 1.88
UBE2D3-220ENST00000505307 ZPR1O75312 459 aa26.79■■□□□ 1.88
UBE2D3-220ENST00000505307 TTC5Q8N0Z6 440 aa26.79■■□□□ 1.88
UBE2D3-220ENST00000505307 SOS1Q07889 1333 aaPredicted RBP26.79■■□□□ 1.88
UBE2D3-220ENST00000505307 ATP10DQ9P241 1426 aa26.79■■□□□ 1.88
UBE2D3-220ENST00000505307 TEFQ10587 303 aa26.78■■□□□ 1.88
UBE2D3-220ENST00000505307 FKBP8Q14318 412 aa26.78■■□□□ 1.88
UBE2D3-220ENST00000505307 KCPQ6ZWJ8 1503 aa26.78■■□□□ 1.88
UBE2D3-220ENST00000505307 ADCY9O60503 1353 aa26.77■■□□□ 1.88
UBE2D3-220ENST00000505307 A0A0G2JLW4 131 aa26.77■■□□□ 1.88
UBE2D3-220ENST00000505307 VIRMAQ69YN4 1812 aaKnown RBP26.76■■□□□ 1.88
UBE2D3-220ENST00000505307 STARD3NLO95772 234 aa26.75■■□□□ 1.87
UBE2D3-220ENST00000505307 DPEP1P16444 411 aa26.75■■□□□ 1.87
UBE2D3-220ENST00000505307 IL17REQ8NFR9 667 aa26.75■■□□□ 1.87
UBE2D3-220ENST00000505307 BCS1LQ9Y276 419 aa26.75■■□□□ 1.87
UBE2D3-220ENST00000505307 TM4SF1P30408 202 aa26.74■■□□□ 1.87
UBE2D3-220ENST00000505307 TEX13AQ9BXU3 409 aaPredicted RBP26.74■■□□□ 1.87
UBE2D3-220ENST00000505307 GPBP1L1Q9HC44 474 aaPredicted RBP26.74■■□□□ 1.87
UBE2D3-220ENST00000505307 NARFQ9UHQ1 456 aa26.74■■□□□ 1.87
UBE2D3-220ENST00000505307 KIAA1551Q9HCM1 1747 aa26.73■■□□□ 1.87
UBE2D3-220ENST00000505307 DDR1Q08345 913 aa26.73■■□□□ 1.87
UBE2D3-220ENST00000505307 RSPH6AQ9H0K4 717 aa26.73■■□□□ 1.87
UBE2D3-220ENST00000505307 ZBTB1Q9Y2K1 713 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms