RNA–Protein interactions for RNA: ENST00000505225.1

RERE-216, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-216ENST00000505225 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
RERE-216ENST00000505225 SCN7AQ01118 1682 aa9.76□□□□□ -0.85
RERE-216ENST00000505225 DICER1Q9UPY3 1922 aaKnown RBP9.76□□□□□ -0.85
RERE-216ENST00000505225 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 MRC1P22897 1456 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
RERE-216ENST00000505225 MSH5O43196 834 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 ITPK1Q13572 414 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 MPRIPQ6WCQ1 1025 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 PIGBQ92521 554 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
RERE-216ENST00000505225 COL11A2P13942 1736 aaPredicted RBP9.75□□□□□ -0.85
RERE-216ENST00000505225 SIPA1L3O60292 1781 aaPredicted RBP9.75□□□□□ -0.85
RERE-216ENST00000505225 LOC102724428A0A0B4J2F2 783 aa9.74□□□□□ -0.85
RERE-216ENST00000505225 SIK1P57059 783 aa9.74□□□□□ -0.85
RERE-216ENST00000505225 SMARCC1Q92922 1105 aaPredicted RBP9.74□□□□□ -0.85
RERE-216ENST00000505225 AK7Q96M32 723 aa9.74□□□□□ -0.85
RERE-216ENST00000505225 CACNA1SQ13698 1873 aa9.73□□□□□ -0.85
RERE-216ENST00000505225 HMGB2P26583 209 aaKnown RBP9.73□□□□□ -0.85
RERE-216ENST00000505225 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
RERE-216ENST00000505225 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
RERE-216ENST00000505225 PHF14O94880 888 aa9.72□□□□□ -0.85
RERE-216ENST00000505225 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
RERE-216ENST00000505225 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
RERE-216ENST00000505225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.852e-6■■□□□ 11.9
RERE-216ENST00000505225 WASHC2AQ641Q2 1341 aa9.72□□□□□ -0.85
RERE-216ENST00000505225 BCORQ6W2J9 1755 aa9.72□□□□□ -0.85
RERE-216ENST00000505225 FER1L6Q2WGJ9 1857 aa9.72□□□□□ -0.85
RERE-216ENST00000505225 PHKG2P15735 406 aa9.71□□□□□ -0.86
RERE-216ENST00000505225 TMF1P82094 1093 aa9.71□□□□□ -0.86
RERE-216ENST00000505225 ASAP1Q9ULH1 1129 aa9.71□□□□□ -0.86
RERE-216ENST00000505225 GNPATO15228 680 aa9.7□□□□□ -0.86
RERE-216ENST00000505225 EYA1Q99502 592 aa9.7□□□□□ -0.86
RERE-216ENST00000505225 WWC3Q9ULE0 1092 aa9.7□□□□□ -0.86
RERE-216ENST00000505225 CNTNAP4Q9C0A0 1308 aa9.7□□□□□ -0.86
RERE-216ENST00000505225 KCPQ6ZWJ8 1503 aa9.7□□□□□ -0.86
RERE-216ENST00000505225 MMP10P09238 476 aa9.69□□□□□ -0.86
RERE-216ENST00000505225 DNAJC5GQ8N7S2 189 aa9.69□□□□□ -0.86
RERE-216ENST00000505225 ATG3Q9NT62 314 aa9.69□□□□□ -0.86
RERE-216ENST00000505225 TMOD3Q9NYL9 352 aa9.69□□□□□ -0.86
RERE-216ENST00000505225 GYS1P13807 737 aa9.68□□□□□ -0.86
RERE-216ENST00000505225 SPG7Q9UQ90 795 aa9.68□□□□□ -0.86
RERE-216ENST00000505225 KCNA3P22001 575 aa9.67□□□□□ -0.86
RERE-216ENST00000505225 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
RERE-216ENST00000505225 APLP1P51693 650 aa9.67□□□□□ -0.86
RERE-216ENST00000505225 TGFB2P61812 414 aa9.67□□□□□ -0.86
RERE-216ENST00000505225 EIF4A2Q14240 407 aaKnown RBP9.67□□□□□ -0.86
RERE-216ENST00000505225 IFNL2Q8IZJ0 200 aa9.67□□□□□ -0.86
RERE-216ENST00000505225 POLKQ9UBT6 870 aa9.67□□□□□ -0.86
RERE-216ENST00000505225 TOMM70O94826 608 aa9.66□□□□□ -0.86
RERE-216ENST00000505225 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
RERE-216ENST00000505225 NMRK2Q9NPI5 230 aa9.66□□□□□ -0.86
RERE-216ENST00000505225 CDCA8Q53HL2 280 aa9.65□□□□□ -0.86
RERE-216ENST00000505225 DCAF5Q96JK2 942 aa9.65□□□□□ -0.86
RERE-216ENST00000505225 USP42Q9H9J4 1324 aaKnown RBP9.64□□□□□ -0.87
RERE-216ENST00000505225 A0A0G2JLW4 131 aa9.64□□□□□ -0.87
RERE-216ENST00000505225 ERVV-2B6SEH9 535 aa9.64□□□□□ -0.87
RERE-216ENST00000505225 DPEP1P16444 411 aa9.64□□□□□ -0.87
RERE-216ENST00000505225 DDR1Q08345 913 aa9.64□□□□□ -0.87
RERE-216ENST00000505225 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
RERE-216ENST00000505225 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
RERE-216ENST00000505225 ARHGEF1Q92888 912 aaKnown RBP9.64□□□□□ -0.87
RERE-216ENST00000505225 BCS1LQ9Y276 419 aa9.64□□□□□ -0.87
RERE-216ENST00000505225 RTCBQ9Y3I0 505 aaKnown RBP9.64□□□□□ -0.87
RERE-216ENST00000505225 ADAMTSL1Q8N6G6 1762 aa9.64□□□□□ -0.87
RERE-216ENST00000505225 RPS6KA4O75676 772 aa9.63□□□□□ -0.87
RERE-216ENST00000505225 NLGN1Q8N2Q7 840 aa9.63□□□□□ -0.87
RERE-216ENST00000505225 CCDC87Q9NVE4 849 aa9.63□□□□□ -0.87
RERE-216ENST00000505225 ZC3H4Q9UPT8 1303 aaKnown RBP9.61□□□□□ -0.87
RERE-216ENST00000505225 THSD7BQ9C0I4 1608 aa9.61□□□□□ -0.87
RERE-216ENST00000505225 LAMB4A4D0S4 1761 aa9.61□□□□□ -0.87
RERE-216ENST00000505225 TRAPPC3LQ5T215 181 aa9.61□□□□□ -0.87
RERE-216ENST00000505225 C9orf131Q5VYM1 1079 aa9.61□□□□□ -0.87
RERE-216ENST00000505225 KLRG1Q96E93 195 aa9.61□□□□□ -0.87
RERE-216ENST00000505225 CARMIL3Q8ND23 1372 aa9.61□□□□□ -0.87
RERE-216ENST00000505225 SCN4AP35499 1836 aa9.61□□□□□ -0.87
RERE-216ENST00000505225 COL3A1P02461 1466 aaPredicted RBP9.6□□□□□ -0.87
RERE-216ENST00000505225 POLRMTO00411 1230 aaKnown RBP9.6□□□□□ -0.87
RERE-216ENST00000505225 PPM1GO15355 546 aaPredicted RBP9.6□□□□□ -0.87
RERE-216ENST00000505225 FCHSD2O94868 740 aa9.6□□□□□ -0.87
RERE-216ENST00000505225 CRKLP46109 303 aaKnown RBP9.6□□□□□ -0.87
RERE-216ENST00000505225 PRELPP51888 382 aa9.6□□□□□ -0.87
RERE-216ENST00000505225 HTRA3P83110 453 aa9.6□□□□□ -0.87
RERE-216ENST00000505225 FSTL1Q12841 308 aa9.6□□□□□ -0.87
RERE-216ENST00000505225 FKBP8Q14318 412 aa9.6□□□□□ -0.87
RERE-216ENST00000505225 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
RERE-216ENST00000505225 SLX4Q8IY92 1834 aa9.6□□□□□ -0.87
RERE-216ENST00000505225 SOS1Q07889 1333 aaPredicted RBP9.59□□□□□ -0.87
RERE-216ENST00000505225 HSP90AB1P08238 724 aaKnown RBP9.59□□□□□ -0.87
RERE-216ENST00000505225 ZNF530Q6P9A1 599 aaPredicted RBP9.59□□□□□ -0.87
RERE-216ENST00000505225 ARHGAP27Q6ZUM4 889 aa9.59□□□□□ -0.87
RERE-216ENST00000505225 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
RERE-216ENST00000505225 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
RERE-216ENST00000505225 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
RERE-216ENST00000505225 COL15A1P39059 1388 aa9.59□□□□□ -0.87
RERE-216ENST00000505225 TM4SF1P30408 202 aa9.58□□□□□ -0.88
RERE-216ENST00000505225 RFC4P35249 363 aa9.58□□□□□ -0.88
RERE-216ENST00000505225 INTS5Q6P9B9 1019 aaKnown RBP9.58□□□□□ -0.88
RERE-216ENST00000505225 PIM2Q9P1W9 311 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms