RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 SPINT1O43278 529 aa9.48□□□□□ -0.89
SSBP2-204ENST00000504985 CBLBQ13191 982 aa9.48□□□□□ -0.89
SSBP2-204ENST00000504985 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
SSBP2-204ENST00000504985 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
SSBP2-204ENST00000504985 INTS6LQ5JSJ4 861 aaKnown RBP9.47□□□□□ -0.89
SSBP2-204ENST00000504985 GOPCQ9HD26 462 aa9.47□□□□□ -0.89
SSBP2-204ENST00000504985 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-204ENST00000504985 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
SSBP2-204ENST00000504985 PTPN23Q9H3S7 1636 aa9.47□□□□□ -0.89
SSBP2-204ENST00000504985 PTK2Q05397 1052 aa9.46□□□□□ -0.9
SSBP2-204ENST00000504985 TCOF1Q13428 1488 aaKnown RBP9.46□□□□□ -0.9
SSBP2-204ENST00000504985 ABCC10Q5T3U5 1492 aa9.46□□□□□ -0.9
SSBP2-204ENST00000504985 ZBTB33Q86T24 672 aa9.46□□□□□ -0.9
SSBP2-204ENST00000504985 ADAM32Q8TC27 787 aa9.46□□□□□ -0.9
SSBP2-204ENST00000504985 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
SSBP2-204ENST00000504985 BCANQ96GW7 911 aa9.46□□□□□ -0.9
SSBP2-204ENST00000504985 ITSN2Q9NZM3 1697 aa9.46□□□□□ -0.9
SSBP2-204ENST00000504985 AP1G2O75843 785 aa9.45□□□□□ -0.9
SSBP2-204ENST00000504985 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
SSBP2-204ENST00000504985 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
SSBP2-204ENST00000504985 CDC42BPAQ5VT25 1732 aa9.44□□□□□ -0.9
SSBP2-204ENST00000504985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.44□□□□□ -0.9
SSBP2-204ENST00000504985 TTLL8A6PVC2 850 aa9.44□□□□□ -0.9
SSBP2-204ENST00000504985 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
SSBP2-204ENST00000504985 RFC5P40937 340 aa9.44□□□□□ -0.9
SSBP2-204ENST00000504985 ESPNB1AK53 854 aa9.43□□□□□ -0.9
SSBP2-204ENST00000504985 NANOS1Q8WY41 292 aaKnown RBP9.43□□□□□ -0.9
SSBP2-204ENST00000504985 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
SSBP2-204ENST00000504985 CDK11AQ9UQ88 783 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-204ENST00000504985 TTC37Q6PGP7 1564 aa9.43□□□□□ -0.9
SSBP2-204ENST00000504985 MIA2Q96PC5 1412 aa9.43□□□□□ -0.9
SSBP2-204ENST00000504985 PTSQ03393 145 aa9.42□□□□□ -0.9
SSBP2-204ENST00000504985 GPR161Q8N6U8 529 aaKnown RBP9.42□□□□□ -0.9
SSBP2-204ENST00000504985 KIF13AQ9H1H9 1805 aa9.42□□□□□ -0.9
SSBP2-204ENST00000504985 PREX2Q70Z35 1606 aa9.41□□□□□ -0.9
SSBP2-204ENST00000504985 SLC35F4A4IF30 521 aa9.41□□□□□ -0.9
SSBP2-204ENST00000504985 KDF1Q8NAX2 398 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-204ENST00000504985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.41□□□□□ -0.9
SSBP2-204ENST00000504985 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
SSBP2-204ENST00000504985 LILRA1O75019 489 aa9.4□□□□□ -0.9
SSBP2-204ENST00000504985 KRT76Q01546 638 aa9.4□□□□□ -0.9
SSBP2-204ENST00000504985 DEKP35659 375 aaKnown RBP9.39□□□□□ -0.91
SSBP2-204ENST00000504985 FAM50AQ14320 339 aaKnown RBP9.39□□□□□ -0.91
SSBP2-204ENST00000504985 SUPT16HQ9Y5B9 1047 aaKnown RBP9.39□□□□□ -0.91
SSBP2-204ENST00000504985 CDC42BPBQ9Y5S2 1711 aa9.39□□□□□ -0.91
SSBP2-204ENST00000504985 CAMSAP2Q08AD1 1489 aa9.39□□□□□ -0.91
SSBP2-204ENST00000504985 DNMT1P26358 1616 aaKnown RBP9.39□□□□□ -0.91
SSBP2-204ENST00000504985 PLEKHD1A6NEE1 506 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 FIGNL2A6NMB9 653 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
SSBP2-204ENST00000504985 CTSOP43234 321 aaPredicted RBP9.38□□□□□ -0.91
SSBP2-204ENST00000504985 NBPF20Q3BBV1 942 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 TMPRSS4Q9NRS4 437 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 PTPRKQ15262 1439 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 MYO5CQ9NQX4 1742 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 CROCC2H7BZ55 1655 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 WDR7Q9Y4E6 1490 aa9.38□□□□□ -0.91
SSBP2-204ENST00000504985 AGBL1Q96MI9 1066 aa9.37□□□□□ -0.91
SSBP2-204ENST00000504985 TMEM259Q4ZIN3 620 aa9.37□□□□□ -0.91
SSBP2-204ENST00000504985 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
SSBP2-204ENST00000504985 ZNF784Q8NCA9 323 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-204ENST00000504985 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
SSBP2-204ENST00000504985 GJD4Q96KN9 370 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-204ENST00000504985 SAMD9LQ8IVG5 1584 aa9.36□□□□□ -0.91
SSBP2-204ENST00000504985 GCC2Q8IWJ2 1684 aa9.36□□□□□ -0.91
SSBP2-204ENST00000504985 ABCA9Q8IUA7 1624 aa9.36□□□□□ -0.91
SSBP2-204ENST00000504985 ERVH48-1M5A8F1 160 aa9.36□□□□□ -0.91
SSBP2-204ENST00000504985 ITGAEP38570 1179 aa9.36□□□□□ -0.91
SSBP2-204ENST00000504985 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
SSBP2-204ENST00000504985 YTHDC1Q96MU7 727 aaKnown RBP9.36□□□□□ -0.91
SSBP2-204ENST00000504985 ASXL2Q76L83 1435 aa9.35□□□□□ -0.91
SSBP2-204ENST00000504985 ADH1AP07327 375 aa9.35□□□□□ -0.91
SSBP2-204ENST00000504985 RNF217Q8TC41 542 aa9.35□□□□□ -0.91
SSBP2-204ENST00000504985 INSM2Q96T92 566 aaPredicted RBP9.35□□□□□ -0.91
SSBP2-204ENST00000504985 ZNF644Q9H582 1327 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-204ENST00000504985 DAPK1P53355 1430 aa9.34□□□□□ -0.91
SSBP2-204ENST00000504985 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
SSBP2-204ENST00000504985 GSK3AP49840 483 aa9.34□□□□□ -0.91
SSBP2-204ENST00000504985 RELBQ01201 579 aa9.34□□□□□ -0.91
SSBP2-204ENST00000504985 DZIP3Q86Y13 1208 aaKnown RBP9.34□□□□□ -0.91
SSBP2-204ENST00000504985 ABCC5O15440 1437 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 ADGBQ8N7X0 1667 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 ARHGEF5Q12774 1597 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 PTGIRP43119 386 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
SSBP2-204ENST00000504985 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
SSBP2-204ENST00000504985 MAPKBP1O60336 1514 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 ARHGAP5Q13017 1502 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 ARAP3Q8WWN8 1544 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 AKNAQ7Z591 1439 aa9.33□□□□□ -0.92
SSBP2-204ENST00000504985 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
SSBP2-204ENST00000504985 RAB3GAP2Q9H2M9 1393 aa9.32□□□□□ -0.92
SSBP2-204ENST00000504985 ITGA6P23229 1130 aa9.32□□□□□ -0.92
SSBP2-204ENST00000504985 PDE4CQ08493 712 aa9.32□□□□□ -0.92
SSBP2-204ENST00000504985 CFDP1Q9UEE9 299 aaPredicted RBP9.32□□□□□ -0.92
SSBP2-204ENST00000504985 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
SSBP2-204ENST00000504985 SYCP2Q9BX26 1530 aa9.31□□□□□ -0.92
SSBP2-204ENST00000504985 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
SSBP2-204ENST00000504985 KCNMA1Q12791 1236 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms