RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 UBR3Q6ZT12 1888 aa29.42■■■□□ 2.3
RNF4-205ENST00000504224 HSP90AB1P08238 724 aaKnown RBP29.42■■■□□ 2.3
RNF4-205ENST00000504224 C1QTNF8P60827 252 aa29.42■■■□□ 2.3
RNF4-205ENST00000504224 ZNF530Q6P9A1 599 aaPredicted RBP29.41■■■□□ 2.3
RNF4-205ENST00000504224 RBM42Q9BTD8 480 aaKnown RBP29.41■■■□□ 2.3
RNF4-205ENST00000504224 PLEKHG2Q9H7P9 1386 aa29.4■■■□□ 2.3
RNF4-205ENST00000504224 ERVV-2B6SEH9 535 aa29.4■■■□□ 2.3
RNF4-205ENST00000504224 GIGYF1O75420 1035 aaPredicted RBP29.4■■■□□ 2.3
RNF4-205ENST00000504224 DCAF5Q96JK2 942 aa29.4■■■□□ 2.3
RNF4-205ENST00000504224 SENP3-EIF4A1A0A087X0R7 540 aa29.39■■■□□ 2.3
RNF4-205ENST00000504224 KNSTRNQ9Y448 316 aa29.39■■■□□ 2.3
RNF4-205ENST00000504224 GOLGB1Q14789 3259 aaKnown RBP29.38■■■□□ 2.29
RNF4-205ENST00000504224 WWC3Q9ULE0 1092 aa29.38■■■□□ 2.29
RNF4-205ENST00000504224 CABP4P57796 275 aa29.37■■■□□ 2.29
RNF4-205ENST00000504224 AMOTQ4VCS5 1084 aa29.37■■■□□ 2.29
RNF4-205ENST00000504224 AEBP1Q8IUX7 1158 aa29.37■■■□□ 2.29
RNF4-205ENST00000504224 C1orf141Q5JVX7 400 aa29.35■■■□□ 2.29
RNF4-205ENST00000504224 RTCBQ9Y3I0 505 aaKnown RBP29.35■■■□□ 2.29
RNF4-205ENST00000504224 MTHFSP49914 203 aa29.34■■■□□ 2.29
RNF4-205ENST00000504224 TRAPPC3LQ5T215 181 aa29.33■■■□□ 2.29
RNF4-205ENST00000504224 SULT6B1Q6IMI4 303 aa29.33■■■□□ 2.29
RNF4-205ENST00000504224 SLC4A9Q96Q91 983 aa29.33■■■□□ 2.29
RNF4-205ENST00000504224 KDRP35968 1356 aa29.33■■■□□ 2.29
RNF4-205ENST00000504224 KDM6AO15550 1401 aaPredicted RBP29.32■■■□□ 2.28
RNF4-205ENST00000504224 MMP10P09238 476 aa29.31■■■□□ 2.28
RNF4-205ENST00000504224 PTCD1O75127 700 aaKnown RBP29.28■■■□□ 2.28
RNF4-205ENST00000504224 ATP10DQ9P241 1426 aa29.28■■■□□ 2.28
RNF4-205ENST00000504224 RC3H1Q5TC82 1133 aaKnown RBP29.27■■■□□ 2.28
RNF4-205ENST00000504224 ARHGEF1Q92888 912 aaKnown RBP29.27■■■□□ 2.28
RNF4-205ENST00000504224 IL13P35225 146 aa29.26■■■□□ 2.27
RNF4-205ENST00000504224 NLGN1Q8N2Q7 840 aa29.26■■■□□ 2.27
RNF4-205ENST00000504224 NFATC2IPQ8NCF5 419 aa29.26■■■□□ 2.27
RNF4-205ENST00000504224 CNTNAP4Q9C0A0 1308 aa29.25■■■□□ 2.27
RNF4-205ENST00000504224 RFC4P35249 363 aa29.25■■■□□ 2.27
RNF4-205ENST00000504224 RPS6KA4O75676 772 aa29.24■■■□□ 2.27
RNF4-205ENST00000504224 ADRA2BP18089 450 aa29.24■■■□□ 2.27
RNF4-205ENST00000504224 AMER1Q5JTC6 1135 aaPredicted RBP29.24■■■□□ 2.27
RNF4-205ENST00000504224 KIF7Q2M1P5 1343 aa29.23■■■□□ 2.27
RNF4-205ENST00000504224 ZNF526Q8TF50 670 aaPredicted RBP29.22■■■□□ 2.27
RNF4-205ENST00000504224 GPBP1L1Q9HC44 474 aaPredicted RBP29.22■■■□□ 2.27
RNF4-205ENST00000504224 ZNF831Q5JPB2 1677 aa29.21■■■□□ 2.27
RNF4-205ENST00000504224 CICQ96RK0 1608 aaPredicted RBP29.2■■■□□ 2.27
RNF4-205ENST00000504224 GYS1P13807 737 aa29.19■■■□□ 2.26
RNF4-205ENST00000504224 CRKLP46109 303 aaKnown RBP29.19■■■□□ 2.26
RNF4-205ENST00000504224 COL5A3P25940 1745 aaPredicted RBP29.18■■■□□ 2.26
RNF4-205ENST00000504224 CCDC87Q9NVE4 849 aa29.18■■■□□ 2.26
RNF4-205ENST00000504224 PARP3Q9Y6F1 533 aa29.18■■■□□ 2.26
RNF4-205ENST00000504224 HMOX1P09601 288 aa29.17■■■□□ 2.26
RNF4-205ENST00000504224 TGFB2P61812 414 aa29.17■■■□□ 2.26
RNF4-205ENST00000504224 AKAP4Q5JQC9 854 aa29.17■■■□□ 2.26
RNF4-205ENST00000504224 PXDNLA1KZ92 1463 aa29.17■■■□□ 2.26
RNF4-205ENST00000504224 ADCY9O60503 1353 aa29.16■■■□□ 2.26
RNF4-205ENST00000504224 A0A0G2JLW4 131 aa29.16■■■□□ 2.26
RNF4-205ENST00000504224 CC2D1BQ5T0F9 858 aaKnown RBP29.16■■■□□ 2.26
RNF4-205ENST00000504224 BCS1LQ9Y276 419 aa29.16■■■□□ 2.26
RNF4-205ENST00000504224 SRP68Q9UHB9 627 aaKnown RBP29.14■■■□□ 2.26
RNF4-205ENST00000504224 C10orf71Q711Q0 1435 aa29.13■■■□□ 2.25
RNF4-205ENST00000504224 LGR6Q9HBX8 967 aa29.13■■■□□ 2.25
RNF4-205ENST00000504224 CNGB1Q14028 1251 aaPredicted RBP29.12■■■□□ 2.25
RNF4-205ENST00000504224 SLC52A2Q9HAB3 445 aa29.12■■■□□ 2.25
RNF4-205ENST00000504224 DPEP1P16444 411 aa29.11■■■□□ 2.25
RNF4-205ENST00000504224 MYH14Q7Z406 1995 aaKnown RBP29.11■■■□□ 2.25
RNF4-205ENST00000504224 C4AP0C0L4 1744 aa29.11■■■□□ 2.25
RNF4-205ENST00000504224 RNMTO43148 476 aaKnown RBP29.1■■■□□ 2.25
RNF4-205ENST00000504224 DIAPH1O60610 1272 aaKnown RBP29.1■■■□□ 2.25
RNF4-205ENST00000504224 SCN11AQ9UI33 1791 aa29.09■■■□□ 2.25
RNF4-205ENST00000504224 DNAJC10Q8IXB1 793 aa29.09■■■□□ 2.25
RNF4-205ENST00000504224 N4BP2Q86UW6 1770 aaPredicted RBP29.08■■■□□ 2.25
RNF4-205ENST00000504224 KIF13BQ9NQT8 1826 aa29.08■■■□□ 2.25
RNF4-205ENST00000504224 PER1O15534 1290 aaPredicted RBP29.08■■■□□ 2.25
RNF4-205ENST00000504224 FCHSD2O94868 740 aa29.08■■■□□ 2.25
RNF4-205ENST00000504224 SLC39A6Q13433 755 aa29.08■■■□□ 2.25
RNF4-205ENST00000504224 FKBP8Q14318 412 aa29.08■■■□□ 2.25
RNF4-205ENST00000504224 INTS5Q6P9B9 1019 aaKnown RBP29.08■■■□□ 2.25
RNF4-205ENST00000504224 ARHGAP27Q6ZUM4 889 aa29.08■■■□□ 2.25
RNF4-205ENST00000504224 USP42Q9H9J4 1324 aaKnown RBP29.08■■■□□ 2.25
RNF4-205ENST00000504224 TJP1Q07157 1748 aa29.07■■■□□ 2.24
RNF4-205ENST00000504224 MTHFSDQ2M296 383 aaKnown RBP29.07■■■□□ 2.24
RNF4-205ENST00000504224 KIAA1551Q9HCM1 1747 aa29.06■■■□□ 2.24
RNF4-205ENST00000504224 ZPR1O75312 459 aa29.04■■■□□ 2.24
RNF4-205ENST00000504224 DDR1Q08345 913 aa29.03■■■□□ 2.24
RNF4-205ENST00000504224 U2SURPO15042 1029 aaKnown RBP29.01■■■□□ 2.23
RNF4-205ENST00000504224 CYP19A1P11511 503 aaPredicted RBP29.01■■■□□ 2.23
RNF4-205ENST00000504224 USPL1Q5W0Q7 1092 aa29.01■■■□□ 2.23
RNF4-205ENST00000504224 MRC1P22897 1456 aa29.01■■■□□ 2.23
RNF4-205ENST00000504224 SOS1Q07889 1333 aaPredicted RBP29■■■□□ 2.23
RNF4-205ENST00000504224 PIM2Q9P1W9 311 aa29■■■□□ 2.23
RNF4-205ENST00000504224 KCNA3P22001 575 aa28.99■■■□□ 2.23
RNF4-205ENST00000504224 POLRMTO00411 1230 aaKnown RBP28.97■■■□□ 2.23
RNF4-205ENST00000504224 DALRD3Q5D0E6 543 aaKnown RBP28.97■■■□□ 2.23
RNF4-205ENST00000504224 KCPQ6ZWJ8 1503 aa28.96■■■□□ 2.23
RNF4-205ENST00000504224 KIF3CO14782 793 aa28.96■■■□□ 2.23
RNF4-205ENST00000504224 HSPA6P17066 643 aa28.96■■■□□ 2.23
RNF4-205ENST00000504224 TM4SF1P30408 202 aa28.96■■■□□ 2.23
RNF4-205ENST00000504224 TTC5Q8N0Z6 440 aa28.96■■■□□ 2.23
RNF4-205ENST00000504224 ZBTB1Q9Y2K1 713 aa28.96■■■□□ 2.23
RNF4-205ENST00000504224 CHRNA5P30532 468 aa28.95■■■□□ 2.22
RNF4-205ENST00000504224 COL15A1P39059 1388 aa28.95■■■□□ 2.22
RNF4-205ENST00000504224 NPC1L1Q9UHC9 1359 aa28.94■■■□□ 2.22
RNF4-205ENST00000504224 NARFQ9UHQ1 456 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms