RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 E9PSI1 815 aa12.08□□□□□ -0.48
PDLIM5-207ENST00000503974 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-207ENST00000503974 KDRP35968 1356 aa12.08□□□□□ -0.48
PDLIM5-207ENST00000503974 PLEKHG2Q9H7P9 1386 aa12.08□□□□□ -0.48
PDLIM5-207ENST00000503974 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 CLSTN1O94985 981 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 CCDC184Q52MB2 194 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 CARD10Q9BWT7 1032 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 SPATA31A5Q5VU36 1347 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 SPATA31A7Q8IWB4 1347 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 PHF14O94880 888 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 KIAA1211Q6ZU35 1233 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 SPATA31A1Q5TZJ5 1347 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
PDLIM5-207ENST00000503974 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 ESPNB1AK53 854 aa12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 EYA1Q99502 592 aa12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 EVA1CP58658 441 aa12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 LTV1Q96GA3 475 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-207ENST00000503974 CSB-PGBD3P0DP91 1061 aa12.05□□□□□ -0.48
PDLIM5-207ENST00000503974 KCNA4P22459 653 aa12.05□□□□□ -0.48
PDLIM5-207ENST00000503974 TMEM132AQ24JP5 1023 aa12.05□□□□□ -0.48
PDLIM5-207ENST00000503974 TOM1L2Q6ZVM7 507 aa12.05□□□□□ -0.48
PDLIM5-207ENST00000503974 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
PDLIM5-207ENST00000503974 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-207ENST00000503974 PKD1L3Q7Z443 1732 aa12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 XRCC6P12956 609 aaKnown RBP eCLIP12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 NUDCQ9Y266 331 aa12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 ZBTB22O15209 634 aa12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
PDLIM5-207ENST00000503974 MEGF6O75095 1541 aa12.03□□□□□ -0.48
PDLIM5-207ENST00000503974 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-207ENST00000503974 GJD4Q96KN9 370 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-207ENST00000503974 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
PDLIM5-207ENST00000503974 CERS3Q8IU89 383 aa12.02□□□□□ -0.48
PDLIM5-207ENST00000503974 TCP11L2Q8N4U5 519 aa12.02□□□□□ -0.48
PDLIM5-207ENST00000503974 CFAP44Q96MT7 982 aa12.02□□□□□ -0.48
PDLIM5-207ENST00000503974 YY1AP1Q9H869 796 aa12.02□□□□□ -0.48
PDLIM5-207ENST00000503974 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.48
PDLIM5-207ENST00000503974 PDE4AP27815 886 aa12.02□□□□□ -0.49
PDLIM5-207ENST00000503974 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-207ENST00000503974 BACH2Q9BYV9 841 aa12.02□□□□□ -0.49
PDLIM5-207ENST00000503974 QTRT2Q9H974 415 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-207ENST00000503974 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
PDLIM5-207ENST00000503974 GOLGA6L3A6NEY3 463 aa12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 ONECUT3O60422 494 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 AEBP1Q8IUX7 1158 aa12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 USHBP1Q8N6Y0 703 aa12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 PHF23Q9BUL5 403 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 CCDC94Q9BW85 323 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 GEMIN8Q9NWZ8 242 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-207ENST00000503974 ERBB4Q15303 1308 aa12□□□□□ -0.49
PDLIM5-207ENST00000503974 FSD2A1L4K1 749 aa12□□□□□ -0.49
PDLIM5-207ENST00000503974 FCHSD2O94868 740 aa12□□□□□ -0.49
PDLIM5-207ENST00000503974 RBM6P78332 1123 aaKnown RBP12□□□□□ -0.49
PDLIM5-207ENST00000503974 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
PDLIM5-207ENST00000503974 CDCA7Q9BWT1 371 aaPredicted RBP12□□□□□ -0.49
PDLIM5-207ENST00000503974 TNS2Q63HR2 1409 aa12□□□□□ -0.49
PDLIM5-207ENST00000503974 U2AF1L5P0DN76 240 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-207ENST00000503974 IL2RBP14784 551 aa11.99□□□□□ -0.49
PDLIM5-207ENST00000503974 U2AF1Q01081 240 aaKnown RBP eCLIP11.99□□□□□ -0.491e-7■■■■■ 28.2
PDLIM5-207ENST00000503974 POTEAQ6S8J7 498 aa11.99□□□□□ -0.49
PDLIM5-207ENST00000503974 HMOX1P09601 288 aa11.99□□□□□ -0.49
PDLIM5-207ENST00000503974 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
PDLIM5-207ENST00000503974 WDR43Q15061 677 aaKnown RBP eCLIP11.98□□□□□ -0.49
PDLIM5-207ENST00000503974 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
PDLIM5-207ENST00000503974 ADAMTS8Q9UP79 889 aa11.98□□□□□ -0.49
PDLIM5-207ENST00000503974 OFD1O75665 1012 aa11.98□□□□□ -0.49
PDLIM5-207ENST00000503974 TRIM44Q96DX7 344 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-207ENST00000503974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■■■□ 20.7
PDLIM5-207ENST00000503974 RGS12O14924 1447 aa11.97□□□□□ -0.49
PDLIM5-207ENST00000503974 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-207ENST00000503974 RAPGEF4Q8WZA2 1011 aa11.97□□□□□ -0.49
PDLIM5-207ENST00000503974 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
PDLIM5-207ENST00000503974 ADAMTS7Q9UKP4 1686 aa11.96□□□□□ -0.49
PDLIM5-207ENST00000503974 MS4A1P11836 297 aa11.96□□□□□ -0.49
PDLIM5-207ENST00000503974 PRKAR2BP31323 418 aa11.96□□□□□ -0.49
PDLIM5-207ENST00000503974 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-207ENST00000503974 RXRBP28702 533 aa11.96□□□□□ -0.5
PDLIM5-207ENST00000503974 EGFL6Q8IUX8 553 aa11.96□□□□□ -0.5
PDLIM5-207ENST00000503974 AMOTQ4VCS5 1084 aa11.95□□□□□ -0.5
PDLIM5-207ENST00000503974 CEP120Q8N960 986 aa11.95□□□□□ -0.5
PDLIM5-207ENST00000503974 DLG5Q8TDM6 1919 aa11.94□□□□□ -0.5
PDLIM5-207ENST00000503974 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
PDLIM5-207ENST00000503974 PHACTR3Q96KR7 559 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms