RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 RNF135Q8IUD6 432 aa7.56□□□□□ -1.2
SMN2-204ENST00000503678 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
SMN2-204ENST00000503678 ZNF428Q96B54 188 aa7.56□□□□□ -1.2
SMN2-204ENST00000503678 RASA1P20936 1047 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 ARID4AP29374 1257 aaPredicted RBP7.55□□□□□ -1.2
SMN2-204ENST00000503678 PTK7Q13308 1070 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 NCOA4Q13772 614 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 MAP7D1Q3KQU3 841 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
SMN2-204ENST00000503678 PHTF2Q8N3S3 785 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 PLPP7Q8NBV4 271 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 CLP1Q92989 425 aaKnown RBP7.55□□□□□ -1.2
SMN2-204ENST00000503678 CDCA7Q9BWT1 371 aaPredicted RBP7.55□□□□□ -1.2
SMN2-204ENST00000503678 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
SMN2-204ENST00000503678 SLC35F4A4IF30 521 aa7.54□□□□□ -1.2
SMN2-204ENST00000503678 SSFA2P28290 1259 aa7.54□□□□□ -1.2
SMN2-204ENST00000503678 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
SMN2-204ENST00000503678 VWA5B2Q8N398 1253 aa7.54□□□□□ -1.2
SMN2-204ENST00000503678 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
SMN2-204ENST00000503678 MAGEB6P1A0A0J9YX57 407 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 FIGNL2A6NMB9 653 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 MSTNO14793 375 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 EML3Q32P44 896 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 OCSTAMPQ9BR26 566 aa7.53□□□□□ -1.2
SMN2-204ENST00000503678 FAM69CQ0P6D2 419 aa7.52□□□□□ -1.21
SMN2-204ENST00000503678 SWI5Q1ZZU3 235 aa7.52□□□□□ -1.21
SMN2-204ENST00000503678 TRIM50Q86XT4 487 aa7.52□□□□□ -1.21
SMN2-204ENST00000503678 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
SMN2-204ENST00000503678 ERCC3P19447 782 aa7.51□□□□□ -1.21
SMN2-204ENST00000503678 ITGA6P23229 1130 aa7.51□□□□□ -1.21
SMN2-204ENST00000503678 ATP1A2P50993 1020 aa7.51□□□□□ -1.21
SMN2-204ENST00000503678 VASH1Q7L8A9 365 aaPredicted RBP7.51□□□□□ -1.21
SMN2-204ENST00000503678 ADAM32Q8TC27 787 aa7.51□□□□□ -1.21
SMN2-204ENST00000503678 ARHGAP9Q9BRR9 750 aa7.51□□□□□ -1.21
SMN2-204ENST00000503678 CARD14Q9BXL6 1004 aa7.51□□□□□ -1.21
SMN2-204ENST00000503678 FSHRP23945 695 aa7.5□□□□□ -1.21
SMN2-204ENST00000503678 PLA2G4EQ3MJ16 856 aa7.5□□□□□ -1.21
SMN2-204ENST00000503678 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
SMN2-204ENST00000503678 ZBTB33Q86T24 672 aa7.5□□□□□ -1.21
SMN2-204ENST00000503678 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
SMN2-204ENST00000503678 MAP4K5Q9Y4K4 846 aa7.5□□□□□ -1.21
SMN2-204ENST00000503678 SPINT1O43278 529 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 SH3BP5LQ7L8J4 393 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 SH3RF1Q7Z6J0 888 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 SPOCK3Q9BQ16 436 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 C1QTNF2Q9BXJ5 285 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 SLAIN2Q9P270 581 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 NOD1Q9Y239 953 aa7.49□□□□□ -1.21
SMN2-204ENST00000503678 MAP3K10Q02779 954 aa7.48□□□□□ -1.21
SMN2-204ENST00000503678 SRSF11Q05519 484 aaKnown RBP7.48□□□□□ -1.21
SMN2-204ENST00000503678 DPYDQ12882 1025 aa7.48□□□□□ -1.21
SMN2-204ENST00000503678 LARGE2Q8N3Y3 721 aa7.48□□□□□ -1.21
SMN2-204ENST00000503678 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
SMN2-204ENST00000503678 DCAF5Q96JK2 942 aa7.48□□□□□ -1.21
SMN2-204ENST00000503678 ENAMQ9NRM1 1142 aa7.48□□□□□ -1.21
SMN2-204ENST00000503678 DNAAF2Q9NVR5 837 aaKnown RBP7.48□□□□□ -1.21
SMN2-204ENST00000503678 CDC14CA4D256 554 aa7.47□□□□□ -1.21
SMN2-204ENST00000503678 SOWAHDA6NJG2 315 aa7.47□□□□□ -1.21
SMN2-204ENST00000503678 CLDN10P78369 228 aa7.47□□□□□ -1.21
SMN2-204ENST00000503678 Q6ZVU0 165 aa7.47□□□□□ -1.21
SMN2-204ENST00000503678 DZIP3Q86Y13 1208 aaKnown RBP7.47□□□□□ -1.21
SMN2-204ENST00000503678 TRMT44Q8IYL2 757 aaKnown RBP7.47□□□□□ -1.21
SMN2-204ENST00000503678 CCDC116Q8IYX3 515 aa7.47□□□□□ -1.21
SMN2-204ENST00000503678 SIX5Q8N196 739 aa7.47□□□□□ -1.21
SMN2-204ENST00000503678 RBM47A0AV96 593 aaKnown RBP7.46□□□□□ -1.22
SMN2-204ENST00000503678 PHF20L1A8MW92 1017 aa7.46□□□□□ -1.22
SMN2-204ENST00000503678 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.22
SMN2-204ENST00000503678 ZNF594Q96JF6 807 aaPredicted RBP7.46□□□□□ -1.22
SMN2-204ENST00000503678 DOLKQ9UPQ8 538 aa7.46□□□□□ -1.22
SMN2-204ENST00000503678 ITGB2P05107 769 aa7.45□□□□□ -1.22
SMN2-204ENST00000503678 ERFEQ4G0M1 354 aa7.45□□□□□ -1.22
SMN2-204ENST00000503678 RNF20Q5VTR2 975 aa7.45□□□□□ -1.22
SMN2-204ENST00000503678 DNAJC14Q6Y2X3 702 aaPredicted RBP7.45□□□□□ -1.22
SMN2-204ENST00000503678 BEND7Q8N7W2 519 aaPredicted RBP7.45□□□□□ -1.22
SMN2-204ENST00000503678 RBM19Q9Y4C8 960 aaKnown RBP7.45□□□□□ -1.22
SMN2-204ENST00000503678 CCDC125Q86Z20 511 aa7.44□□□□□ -1.22
SMN2-204ENST00000503678 SLC10A4Q96EP9 437 aa7.44□□□□□ -1.22
SMN2-204ENST00000503678 PGPEP1Q9NXJ5 209 aa7.44□□□□□ -1.22
SMN2-204ENST00000503678 ZBTB7BO15156 539 aaPredicted RBP7.43□□□□□ -1.22
SMN2-204ENST00000503678 DKK1O94907 266 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 PROCP04070 461 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 SERPINB4P48594 390 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 SEC13P55735 322 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 GTF2IP78347 998 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 CBLBQ13191 982 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 SIRT1Q96EB6 747 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 CCDC85AQ96PX6 553 aaPredicted RBP7.43□□□□□ -1.22
SMN2-204ENST00000503678 PSMG3-AS1Q96PY0 264 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 CDV3Q9UKY7 258 aaKnown RBP7.43□□□□□ -1.22
SMN2-204ENST00000503678 CNTNAP5Q8WYK1 1306 aa7.43□□□□□ -1.22
SMN2-204ENST00000503678 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
SMN2-204ENST00000503678 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms