RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 A0A0G2JLW4 131 aa21.99■■□□□ 1.11
DDR1-250ENST00000503628 TMF1P82094 1093 aa21.99■■□□□ 1.11
DDR1-250ENST00000503628 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
DDR1-250ENST00000503628 KIAA1551Q9HCM1 1747 aa21.98■■□□□ 1.11
DDR1-250ENST00000503628 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
DDR1-250ENST00000503628 TGFB2P61812 414 aa21.98■■□□□ 1.11
DDR1-250ENST00000503628 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
DDR1-250ENST00000503628 ARHGAP27Q6ZUM4 889 aa21.97■■□□□ 1.11
DDR1-250ENST00000503628 ATG3Q9NT62 314 aa21.97■■□□□ 1.11
DDR1-250ENST00000503628 NMRK2Q9NPI5 230 aa21.96■■□□□ 1.11
DDR1-250ENST00000503628 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.1
DDR1-250ENST00000503628 EYA1Q99502 592 aa21.95■■□□□ 1.1
DDR1-250ENST00000503628 CARD14Q9BXL6 1004 aa21.95■■□□□ 1.1
DDR1-250ENST00000503628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.95■■□□□ 1.1
DDR1-250ENST00000503628 PHKG2P15735 406 aa21.94■■□□□ 1.1
DDR1-250ENST00000503628 IFNL2Q8IZJ0 200 aa21.94■■□□□ 1.1
DDR1-250ENST00000503628 NLGN1Q8N2Q7 840 aa21.94■■□□□ 1.1
DDR1-250ENST00000503628 RTCBQ9Y3I0 505 aaKnown RBP21.94■■□□□ 1.1
DDR1-250ENST00000503628 DPEP1P16444 411 aa21.93■■□□□ 1.1
DDR1-250ENST00000503628 WASHC2AQ641Q2 1341 aa21.92■■□□□ 1.1
DDR1-250ENST00000503628 FCHSD2O94868 740 aa21.92■■□□□ 1.1
DDR1-250ENST00000503628 C10orf71Q711Q0 1435 aa21.91■■□□□ 1.1
DDR1-250ENST00000503628 ARHGEF1Q92888 912 aaKnown RBP21.91■■□□□ 1.1
DDR1-250ENST00000503628 SLC4A9Q96Q91 983 aa21.91■■□□□ 1.1
DDR1-250ENST00000503628 CCDC87Q9NVE4 849 aa21.9■■□□□ 1.1
DDR1-250ENST00000503628 TIMELESSQ9UNS1 1208 aa21.9■■□□□ 1.1
DDR1-250ENST00000503628 CDCA8Q53HL2 280 aa21.89■■□□□ 1.09
DDR1-250ENST00000503628 RBM42Q9BTD8 480 aaKnown RBP21.89■■□□□ 1.09
DDR1-250ENST00000503628 BRCA1P38398 1863 aaKnown RBP21.89■■□□□ 1.09
DDR1-250ENST00000503628 WDR90Q96KV7 1748 aa21.89■■□□□ 1.09
DDR1-250ENST00000503628 ANKRD26Q9UPS8 1709 aa21.89■■□□□ 1.09
DDR1-250ENST00000503628 GYS1P13807 737 aa21.88■■□□□ 1.09
DDR1-250ENST00000503628 KCNA3P22001 575 aa21.88■■□□□ 1.09
DDR1-250ENST00000503628 HTRA3P83110 453 aa21.88■■□□□ 1.09
DDR1-250ENST00000503628 RC3H1Q5TC82 1133 aaKnown RBP21.88■■□□□ 1.09
DDR1-250ENST00000503628 C9orf131Q5VYM1 1079 aa21.88■■□□□ 1.09
DDR1-250ENST00000503628 RBM46Q8TBY0 533 aaKnown RBP21.88■■□□□ 1.09
DDR1-250ENST00000503628 C4AP0C0L4 1744 aa21.88■■□□□ 1.09
DDR1-250ENST00000503628 KDRP35968 1356 aa21.87■■□□□ 1.09
DDR1-250ENST00000503628 ADRA2BP18089 450 aa21.87■■□□□ 1.09
DDR1-250ENST00000503628 RFC4P35249 363 aa21.87■■□□□ 1.09
DDR1-250ENST00000503628 PARP3Q9Y6F1 533 aa21.87■■□□□ 1.09
DDR1-250ENST00000503628 C16orf71Q8IYS4 520 aaPredicted RBP21.86■■□□□ 1.09
DDR1-250ENST00000503628 POLKQ9UBT6 870 aa21.86■■□□□ 1.09
DDR1-250ENST00000503628 RPS6KA4O75676 772 aa21.85■■□□□ 1.09
DDR1-250ENST00000503628 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
DDR1-250ENST00000503628 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
DDR1-250ENST00000503628 COL5A3P25940 1745 aaPredicted RBP21.84■■□□□ 1.09
DDR1-250ENST00000503628 ERVV-2B6SEH9 535 aa21.84■■□□□ 1.09
DDR1-250ENST00000503628 KLRG1Q96E93 195 aa21.84■■□□□ 1.09
DDR1-250ENST00000503628 CNTNAP4Q9C0A0 1308 aa21.83■■□□□ 1.09
DDR1-250ENST00000503628 MYH14Q7Z406 1995 aaKnown RBP21.83■■□□□ 1.09
DDR1-250ENST00000503628 COL13A1Q5TAT6 717 aaPredicted RBP21.83■■□□□ 1.09
DDR1-250ENST00000503628 PIM2Q9P1W9 311 aa21.83■■□□□ 1.09
DDR1-250ENST00000503628 FSTL1Q12841 308 aa21.82■■□□□ 1.08
DDR1-250ENST00000503628 EIF4A2Q14240 407 aaKnown RBP21.82■■□□□ 1.08
DDR1-250ENST00000503628 JMYQ8N9B5 988 aa21.81■■□□□ 1.08
DDR1-250ENST00000503628 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
DDR1-250ENST00000503628 KCPQ6ZWJ8 1503 aa21.8■■□□□ 1.08
DDR1-250ENST00000503628 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
DDR1-250ENST00000503628 RRAGCQ9HB90 399 aa21.8■■□□□ 1.08
DDR1-250ENST00000503628 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
DDR1-250ENST00000503628 DALRD3Q5D0E6 543 aaKnown RBP21.79■■□□□ 1.08
DDR1-250ENST00000503628 RNF181Q9P0P0 153 aa21.79■■□□□ 1.08
DDR1-250ENST00000503628 SRP68Q9UHB9 627 aaKnown RBP21.79■■□□□ 1.08
DDR1-250ENST00000503628 HSP90AB1P08238 724 aaKnown RBP21.78■■□□□ 1.08
DDR1-250ENST00000503628 TNNT2P45379 298 aaPredicted RBP21.78■■□□□ 1.08
DDR1-250ENST00000503628 CABP4P57796 275 aa21.78■■□□□ 1.08
DDR1-250ENST00000503628 SBF1O95248 1867 aa21.77■■□□□ 1.08
DDR1-250ENST00000503628 PTCD1O75127 700 aaKnown RBP21.77■■□□□ 1.08
DDR1-250ENST00000503628 FKBP8Q14318 412 aa21.77■■□□□ 1.08
DDR1-250ENST00000503628 PCNTO95613 3336 aa21.77■■□□□ 1.07
DDR1-250ENST00000503628 CHRNA5P30532 468 aa21.76■■□□□ 1.07
DDR1-250ENST00000503628 CRKLP46109 303 aaKnown RBP21.76■■□□□ 1.07
DDR1-250ENST00000503628 DDR1Q08345 913 aa21.76■■□□□ 1.07
DDR1-250ENST00000503628 PLEKHO1Q53GL0 409 aaPredicted RBP21.76■■□□□ 1.07
DDR1-250ENST00000503628 KDM6AO15550 1401 aaPredicted RBP21.75■■□□□ 1.07
DDR1-250ENST00000503628 CAPN15O75808 1086 aa21.75■■□□□ 1.07
DDR1-250ENST00000503628 ZNF530Q6P9A1 599 aaPredicted RBP21.75■■□□□ 1.07
DDR1-250ENST00000503628 USP42Q9H9J4 1324 aaKnown RBP21.74■■□□□ 1.07
DDR1-250ENST00000503628 TNRC6CQ9HCJ0 1690 aaKnown RBP21.72■■□□□ 1.07
DDR1-250ENST00000503628 MTHFSP49914 203 aa21.72■■□□□ 1.07
DDR1-250ENST00000503628 NFATC2IPQ8NCF5 419 aa21.72■■□□□ 1.07
DDR1-250ENST00000503628 AMOTQ4VCS5 1084 aa21.71■■□□□ 1.07
DDR1-250ENST00000503628 TNS4Q8IZW8 715 aa21.71■■□□□ 1.07
DDR1-250ENST00000503628 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
DDR1-250ENST00000503628 POLRMTO00411 1230 aaKnown RBP21.7■■□□□ 1.06
DDR1-250ENST00000503628 TM4SF1P30408 202 aa21.7■■□□□ 1.06
DDR1-250ENST00000503628 INTS5Q6P9B9 1019 aaKnown RBP21.69■■□□□ 1.06
DDR1-250ENST00000503628 RASSF7Q02833 373 aa21.68■■□□□ 1.06
DDR1-250ENST00000503628 C1orf141Q5JVX7 400 aa21.68■■□□□ 1.06
DDR1-250ENST00000503628 TJP1Q07157 1748 aa21.68■■□□□ 1.06
DDR1-250ENST00000503628 AEBP1Q8IUX7 1158 aa21.67■■□□□ 1.06
DDR1-250ENST00000503628 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
DDR1-250ENST00000503628 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
DDR1-250ENST00000503628 ZPR1O75312 459 aa21.66■■□□□ 1.06
DDR1-250ENST00000503628 USPL1Q5W0Q7 1092 aa21.66■■□□□ 1.06
DDR1-250ENST00000503628 PRELPP51888 382 aa21.65■■□□□ 1.06
DDR1-250ENST00000503628 VEGFAP15692 232 aaPredicted RBP21.64■■□□□ 1.05
DDR1-250ENST00000503628 AFDNP55196 1824 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms