RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 VIRMAQ69YN4 1812 aaKnown RBP12.3□□□□□ -0.44
NR1I3-218ENST00000503547 CICQ96RK0 1608 aaPredicted RBP12.29□□□□□ -0.44
NR1I3-218ENST00000503547 C4AP0C0L4 1744 aa12.29□□□□□ -0.44
NR1I3-218ENST00000503547 ADCY9O60503 1353 aa12.29□□□□□ -0.44
NR1I3-218ENST00000503547 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
NR1I3-218ENST00000503547 KIAA1551Q9HCM1 1747 aa12.28□□□□□ -0.44
NR1I3-218ENST00000503547 BRCA1P38398 1863 aaKnown RBP12.28□□□□□ -0.44
NR1I3-218ENST00000503547 PHKG2P15735 406 aa12.28□□□□□ -0.44
NR1I3-218ENST00000503547 ITPK1Q13572 414 aa12.28□□□□□ -0.44
NR1I3-218ENST00000503547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.44
NR1I3-218ENST00000503547 ZNF831Q5JPB2 1677 aa12.28□□□□□ -0.44
NR1I3-218ENST00000503547 MMP10P09238 476 aa12.27□□□□□ -0.45
NR1I3-218ENST00000503547 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
NR1I3-218ENST00000503547 ARFGEF1Q9Y6D6 1849 aa12.26□□□□□ -0.45
NR1I3-218ENST00000503547 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
NR1I3-218ENST00000503547 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
NR1I3-218ENST00000503547 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
NR1I3-218ENST00000503547 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
NR1I3-218ENST00000503547 TRAPPC3LQ5T215 181 aa12.25□□□□□ -0.45
NR1I3-218ENST00000503547 PXDNLA1KZ92 1463 aa12.25□□□□□ -0.45
NR1I3-218ENST00000503547 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
NR1I3-218ENST00000503547 HSPA6P17066 643 aa12.24□□□□□ -0.45
NR1I3-218ENST00000503547 KDRP35968 1356 aa12.24□□□□□ -0.45
NR1I3-218ENST00000503547 TRIM26Q12899 539 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-218ENST00000503547 SCN11AQ9UI33 1791 aa12.24□□□□□ -0.45
NR1I3-218ENST00000503547 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
NR1I3-218ENST00000503547 RFC4P35249 363 aa12.23□□□□□ -0.45
NR1I3-218ENST00000503547 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
NR1I3-218ENST00000503547 C10orf71Q711Q0 1435 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 CABP4P57796 275 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 PLEKHO1Q53GL0 409 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-218ENST00000503547 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-218ENST00000503547 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 CCDC87Q9NVE4 849 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 TJP1Q07157 1748 aa12.22□□□□□ -0.45
NR1I3-218ENST00000503547 CNTNAP4Q9C0A0 1308 aa12.21□□□□□ -0.45
NR1I3-218ENST00000503547 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
NR1I3-218ENST00000503547 C1orf141Q5JVX7 400 aa12.21□□□□□ -0.45
NR1I3-218ENST00000503547 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
NR1I3-218ENST00000503547 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
NR1I3-218ENST00000503547 PARP3Q9Y6F1 533 aa12.21□□□□□ -0.45
NR1I3-218ENST00000503547 SBF1O95248 1867 aa12.21□□□□□ -0.46
NR1I3-218ENST00000503547 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-218ENST00000503547 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
NR1I3-218ENST00000503547 FCHSD2O94868 740 aa12.2□□□□□ -0.46
NR1I3-218ENST00000503547 TGFB2P61812 414 aa12.2□□□□□ -0.46
NR1I3-218ENST00000503547 SLC4A9Q96Q91 983 aa12.2□□□□□ -0.46
NR1I3-218ENST00000503547 CCDC88AQ3V6T2 1871 aa12.2□□□□□ -0.46
NR1I3-218ENST00000503547 KIF3CO14782 793 aa12.19□□□□□ -0.46
NR1I3-218ENST00000503547 GYS1P13807 737 aa12.19□□□□□ -0.46
NR1I3-218ENST00000503547 DPEP1P16444 411 aa12.19□□□□□ -0.46
NR1I3-218ENST00000503547 MTHFSP49914 203 aa12.19□□□□□ -0.46
NR1I3-218ENST00000503547 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
NR1I3-218ENST00000503547 RC3H1Q5TC82 1133 aaKnown RBP12.19□□□□□ -0.46
NR1I3-218ENST00000503547 TIMELESSQ9UNS1 1208 aa12.19□□□□□ -0.46
NR1I3-218ENST00000503547 AFDNP55196 1824 aaKnown RBP12.18□□□□□ -0.46
NR1I3-218ENST00000503547 WDR90Q96KV7 1748 aa12.18□□□□□ -0.46
NR1I3-218ENST00000503547 RPS6KA4O75676 772 aa12.18□□□□□ -0.46
NR1I3-218ENST00000503547 MORC1Q86VD1 984 aa12.18□□□□□ -0.46
NR1I3-218ENST00000503547 PCGF6Q9BYE7 350 aa12.18□□□□□ -0.46
NR1I3-218ENST00000503547 PANK3Q9H999 370 aa12.18□□□□□ -0.46
NR1I3-218ENST00000503547 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
NR1I3-218ENST00000503547 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
NR1I3-218ENST00000503547 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
NR1I3-218ENST00000503547 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
NR1I3-218ENST00000503547 APLP1P51693 650 aa12.16□□□□□ -0.46
NR1I3-218ENST00000503547 SULT6B1Q6IMI4 303 aa12.16□□□□□ -0.46
NR1I3-218ENST00000503547 C16orf71Q8IYS4 520 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-218ENST00000503547 NFATC2IPQ8NCF5 419 aa12.16□□□□□ -0.46
NR1I3-218ENST00000503547 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
NR1I3-218ENST00000503547 TOMM70O94826 608 aa12.15□□□□□ -0.46
NR1I3-218ENST00000503547 HSPA5P11021 654 aaKnown RBP12.15□□□□□ -0.46
NR1I3-218ENST00000503547 NMRK2Q9NPI5 230 aa12.15□□□□□ -0.46
NR1I3-218ENST00000503547 PIM2Q9P1W9 311 aa12.15□□□□□ -0.46
NR1I3-218ENST00000503547 DLEC1Q9Y238 1755 aa12.15□□□□□ -0.46
NR1I3-218ENST00000503547 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
NR1I3-218ENST00000503547 FKBP8Q14318 412 aa12.14□□□□□ -0.47
NR1I3-218ENST00000503547 DALRD3Q5D0E6 543 aaKnown RBP12.14□□□□□ -0.47
NR1I3-218ENST00000503547 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
NR1I3-218ENST00000503547 USP42Q9H9J4 1324 aaKnown RBP12.13□□□□□ -0.47
NR1I3-218ENST00000503547 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
NR1I3-218ENST00000503547 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
NR1I3-218ENST00000503547 ZPR1O75312 459 aa12.13□□□□□ -0.47
NR1I3-218ENST00000503547 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
NR1I3-218ENST00000503547 KCPQ6ZWJ8 1503 aa12.12□□□□□ -0.47
NR1I3-218ENST00000503547 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
NR1I3-218ENST00000503547 DDR1Q08345 913 aa12.12□□□□□ -0.47
NR1I3-218ENST00000503547 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
NR1I3-218ENST00000503547 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
NR1I3-218ENST00000503547 KCNA3P22001 575 aa12.11□□□□□ -0.47
NR1I3-218ENST00000503547 CHRNA5P30532 468 aa12.11□□□□□ -0.47
NR1I3-218ENST00000503547 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
NR1I3-218ENST00000503547 PCNTO95613 3336 aa12.1□□□□□ -0.47
NR1I3-218ENST00000503547 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
NR1I3-218ENST00000503547 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
NR1I3-218ENST00000503547 DNAJC10Q8IXB1 793 aa12.1□□□□□ -0.47
NR1I3-218ENST00000503547 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms