RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MAP3K10Q02779 954 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 PDIA6Q15084 440 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 ZNF804BA4D1E1 1349 aa3.69□□□□□ -1.82
NEDD4-204ENST00000503468 PLIN4Q96Q06 1357 aa3.68□□□□□ -1.82
NEDD4-204ENST00000503468 ANP32CO43423 234 aa3.68□□□□□ -1.82
NEDD4-204ENST00000503468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEDD4-204ENST00000503468 FNDC1Q4ZHG4 1894 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-204ENST00000503468 PKNOX2Q96KN3 472 aa3.68□□□□□ -1.82
NEDD4-204ENST00000503468 SGIP1Q9BQI5 828 aa3.68□□□□□ -1.82
NEDD4-204ENST00000503468 GPR108Q9NPR9 543 aa3.68□□□□□ -1.82
NEDD4-204ENST00000503468 SLC10A5Q5PT55 438 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 SPATA31A6Q5VVP1 1343 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 ROBO3Q96MS0 1386 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 THRAP3Q9Y2W1 955 aaKnown RBP3.67□□□□□ -1.82
NEDD4-204ENST00000503468 CFAP70Q5T0N1 1121 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 NEDD4P46934 1319 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 EVC2Q86UK5 1308 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 RANGAP1P46060 587 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-204ENST00000503468 SLC4A1APQ9BWU0 796 aaKnown RBP3.67□□□□□ -1.82
NEDD4-204ENST00000503468 PLCB2Q00722 1185 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 AK7Q96M32 723 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 CDHR2Q9BYE9 1310 aa3.67□□□□□ -1.82
NEDD4-204ENST00000503468 MMP14P50281 582 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 CCDC136Q96JN2 1154 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 IP6K1Q92551 441 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 MRIQ9BWK5 157 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 CERKQ8TCT0 537 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 SYNPO2Q9UMS6 1093 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 PTPRFP10586 1907 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 TULP1O00294 542 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-204ENST00000503468 ZNF326Q5BKZ1 582 aaKnown RBP3.66□□□□□ -1.82
NEDD4-204ENST00000503468 DDRGK1Q96HY6 314 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 ANTXR1Q9H6X2 564 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 WDR17Q8IZU2 1322 aa3.66□□□□□ -1.82
NEDD4-204ENST00000503468 NECTIN2Q92692 538 aa3.65□□□□□ -1.82
NEDD4-204ENST00000503468 NOL10Q9BSC4 688 aaKnown RBP3.65□□□□□ -1.82
NEDD4-204ENST00000503468 NEFMP07197 916 aa3.65□□□□□ -1.82
NEDD4-204ENST00000503468 RBM25P49756 843 aaKnown RBP3.65□□□□□ -1.82
NEDD4-204ENST00000503468 IRF5Q13568 498 aa3.65□□□□□ -1.82
NEDD4-204ENST00000503468 ZBTB40Q9NUA8 1239 aa3.65□□□□□ -1.82
NEDD4-204ENST00000503468 ISY1Q9ULR0 285 aaKnown RBP3.65□□□□□ -1.83
NEDD4-204ENST00000503468 WDR19Q8NEZ3 1342 aa3.65□□□□□ -1.83
NEDD4-204ENST00000503468 ATRNL1Q5VV63 1379 aa3.65□□□□□ -1.83
NEDD4-204ENST00000503468 RRP9O43818 475 aaKnown RBP3.65□□□□□ -1.83
NEDD4-204ENST00000503468 KAZALD1Q96I82 304 aa3.65□□□□□ -1.83
NEDD4-204ENST00000503468 MAP7D2Q96T17 732 aa3.65□□□□□ -1.83
NEDD4-204ENST00000503468 PGAP2Q9UHJ9 254 aa3.65□□□□□ -1.83
NEDD4-204ENST00000503468 PPP1R37O75864 691 aa3.65□□□□□ -1.83
NEDD4-204ENST00000503468 IPO9Q96P70 1041 aaKnown RBP3.65□□□□□ -1.83
NEDD4-204ENST00000503468 SBF1O95248 1867 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 HOXA10P31260 410 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-204ENST00000503468 RFX5P48382 616 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-204ENST00000503468 MED23Q9ULK4 1368 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 KIF3BO15066 747 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 ARID5BQ14865 1188 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 COL4A2P08572 1712 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 ADCY9O60503 1353 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 TRHP20396 242 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-204ENST00000503468 RCAN1P53805 252 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 SIN3AQ96ST3 1273 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 CHD4Q14839 1912 aa3.64□□□□□ -1.83
NEDD4-204ENST00000503468 FAM69CQ0P6D2 419 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 CRY2Q49AN0 593 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 ELOA2Q8IYF1 753 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-204ENST00000503468 FAM43AQ8N2R8 423 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 HDGFP51858 240 aaKnown RBP3.63□□□□□ -1.83
NEDD4-204ENST00000503468 TMEM132AQ24JP5 1023 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 VGLL2Q8N8G2 317 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 MTERF4Q7Z6M4 381 aaKnown RBP3.63□□□□□ -1.83
NEDD4-204ENST00000503468 SSH3Q8TE77 659 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 CFAP44Q96MT7 982 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 CARD10Q9BWT7 1032 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 MKRN1Q9UHC7 482 aaKnown RBP3.63□□□□□ -1.83
NEDD4-204ENST00000503468 VAMP4O75379 141 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 L1TD1Q5T7N2 865 aaKnown RBP3.63□□□□□ -1.83
NEDD4-204ENST00000503468 CHRDQ9H2X0 955 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 ANO8Q9HCE9 1232 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-204ENST00000503468 IFT57Q9NWB7 429 aa3.63□□□□□ -1.83
NEDD4-204ENST00000503468 TCERG1O14776 1098 aaKnown RBP3.62□□□□□ -1.83
NEDD4-204ENST00000503468 CSF1RP07333 972 aa3.62□□□□□ -1.83
NEDD4-204ENST00000503468 KIF2CQ99661 725 aa3.62□□□□□ -1.83
NEDD4-204ENST00000503468 CNTNAP4Q9C0A0 1308 aa3.62□□□□□ -1.83
NEDD4-204ENST00000503468 RC3H1Q5TC82 1133 aaKnown RBP3.62□□□□□ -1.83
NEDD4-204ENST00000503468 CDCA7Q9BWT1 371 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-204ENST00000503468 MYO3BQ8WXR4 1341 aa3.62□□□□□ -1.83
NEDD4-204ENST00000503468 LCTP09848 1927 aa3.62□□□□□ -1.83
NEDD4-204ENST00000503468 SLX4Q8IY92 1834 aa3.62□□□□□ -1.83
NEDD4-204ENST00000503468 FAM163AQ96GL9 167 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-204ENST00000503468 U2SURPO15042 1029 aaKnown RBP3.61□□□□□ -1.83
NEDD4-204ENST00000503468 TMF1P82094 1093 aa3.61□□□□□ -1.83
NEDD4-204ENST00000503468 KCND1Q9NSA2 647 aa3.61□□□□□ -1.83
NEDD4-204ENST00000503468 PODXL2Q9NZ53 605 aa3.61□□□□□ -1.83
NEDD4-204ENST00000503468 KIF26AQ9ULI4 1882 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-204ENST00000503468 LTBP3Q9NS15 1303 aa3.61□□□□□ -1.83
NEDD4-204ENST00000503468 CCDC171Q6TFL3 1326 aa3.61□□□□□ -1.83
NEDD4-204ENST00000503468 SALL1Q9NSC2 1324 aa3.61□□□□□ -1.83
NEDD4-204ENST00000503468 NKX3-2P78367 333 aa3.61□□□□□ -1.83
NEDD4-204ENST00000503468 RBM43Q6ZSC3 357 aaKnown RBP3.61□□□□□ -1.83
NEDD4-204ENST00000503468 PNNQ9H307 717 aaKnown RBP3.61□□□□□ -1.83
NEDD4-204ENST00000503468 ATP8B3O60423 1300 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms