RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RTF1Q92541 710 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 TNNQ9UQP3 1299 aa8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 EVA1CP58658 441 aa8.93□□□□□ -0.98
TOPBP1-203ENST00000503464 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
TOPBP1-203ENST00000503464 N4BP2Q86UW6 1770 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 DOT1LQ8TEK3 1739 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 SPATA31A6Q5VVP1 1343 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 ELL2O00472 640 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 IL2RBP14784 551 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 TWISTNBQ3B726 338 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 C1orf141Q5JVX7 400 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 PIP4P2Q8N4L2 257 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 EXOC6Q8TAG9 804 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 TSPYL4Q9UJ04 414 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 SPG7Q9UQ90 795 aa8.92□□□□□ -0.98
TOPBP1-203ENST00000503464 LAMB4A4D0S4 1761 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 THSD7AQ9UPZ6 1657 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 TNS2Q63HR2 1409 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 SPATA31A1Q5TZJ5 1347 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 KCNQ3O43525 872 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 RLBP1P12271 317 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 TAF7Q15545 349 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 ERICH6BQ5W0A0 696 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 CRBNQ96SW2 442 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 BABAM1Q9NWV8 329 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 USP35Q9P2H5 1018 aa8.91□□□□□ -0.98
TOPBP1-203ENST00000503464 RGS12O14924 1447 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 SPATA31A5Q5VU36 1347 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 SPATA31A7Q8IWB4 1347 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 PCDH11XQ9BZA7 1347 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 PCDH11YQ9BZA8 1340 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 TCERG1O14776 1098 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 BRPF1P55201 1214 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 ALDH1L2Q3SY69 923 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 IFNL2Q8IZJ0 200 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 MRPL50Q8N5N7 158 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 PLSCR2Q9NRY7 297 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 SMC4Q9NTJ3 1288 aa8.9□□□□□ -0.98
TOPBP1-203ENST00000503464 KCPQ6ZWJ8 1503 aa8.9□□□□□ -0.99
TOPBP1-203ENST00000503464 EIF4A1P60842 406 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-203ENST00000503464 FNBP4Q8N3X1 1017 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-203ENST00000503464 PANK1Q8TE04 598 aa8.89□□□□□ -0.99
TOPBP1-203ENST00000503464 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
TOPBP1-203ENST00000503464 DCAF5Q96JK2 942 aa8.89□□□□□ -0.99
TOPBP1-203ENST00000503464 C8orf37Q96NL8 207 aa8.89□□□□□ -0.99
TOPBP1-203ENST00000503464 SLC52A2Q9HAB3 445 aa8.89□□□□□ -0.99
TOPBP1-203ENST00000503464 BTBD11A6QL63 1104 aa8.88□□□□□ -0.99
TOPBP1-203ENST00000503464 TRIM27P14373 513 aa8.88□□□□□ -0.99
TOPBP1-203ENST00000503464 TEFQ10587 303 aa8.88□□□□□ -0.99
TOPBP1-203ENST00000503464 UNC5CLQ8IV45 518 aa8.88□□□□□ -0.99
TOPBP1-203ENST00000503464 FRAT1Q92837 279 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-203ENST00000503464 PPP4R2Q9NY27 417 aa8.88□□□□□ -0.99
TOPBP1-203ENST00000503464 NOB1Q9ULX3 412 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-203ENST00000503464 KIF16BQ96L93 1317 aa8.87□□□□□ -0.99
TOPBP1-203ENST00000503464 PDE3AQ14432 1141 aa8.87□□□□□ -0.99
TOPBP1-203ENST00000503464 VPS72Q15906 364 aa8.87□□□□□ -0.99
TOPBP1-203ENST00000503464 ZKSCAN2Q63HK3 967 aa8.87□□□□□ -0.99
TOPBP1-203ENST00000503464 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-203ENST00000503464 NFATC2IPQ8NCF5 419 aa8.87□□□□□ -0.99
TOPBP1-203ENST00000503464 AKT1S1Q96B36 256 aa8.87□□□□□ -0.99
TOPBP1-203ENST00000503464 PRAMEF22A3QJZ6 481 aa8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 HSP90AB1P08238 724 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 SLC39A6Q13433 755 aa8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 B4GALNT3Q6L9W6 998 aa8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 ATF7IPQ6VMQ6 1270 aa8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 BARGINQ6ZT62 677 aa8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 THRAP3Q9Y2W1 955 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 ATRNO75882 1429 aa8.86□□□□□ -0.99
TOPBP1-203ENST00000503464 TJP1Q07157 1748 aa8.85□□□□□ -0.99
TOPBP1-203ENST00000503464 ABCC4O15439 1325 aa8.85□□□□□ -0.99
TOPBP1-203ENST00000503464 SOS1Q07889 1333 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-203ENST00000503464 ZNF790Q6PG37 636 aa8.85□□□□□ -0.99
TOPBP1-203ENST00000503464 G2E3Q7L622 706 aa8.85□□□□□ -0.99
TOPBP1-203ENST00000503464 CLUAP1Q96AJ1 413 aa8.85□□□□□ -0.99
TOPBP1-203ENST00000503464 COG6Q9Y2V7 657 aa8.85□□□□□ -0.99
TOPBP1-203ENST00000503464 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 SBF2Q86WG5 1849 aa8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 CICQ96RK0 1608 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 ERVV-2B6SEH9 535 aa8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 GIGYF1O75420 1035 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 HOXB7P09629 217 aa8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 CANXP27824 592 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 SAMD1Q6SPF0 538 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 DZIP1LQ8IYY4 767 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 TMEM57Q8N5G2 664 aa8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 ARHGAP45Q92619 1136 aa8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 ZNF496Q96IT1 587 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-203ENST00000503464 AFF2P51816 1311 aa8.83□□□□□ -1
TOPBP1-203ENST00000503464 BCL9O00512 1426 aa8.83□□□□□ -1
TOPBP1-203ENST00000503464 CABP4P57796 275 aa8.83□□□□□ -1
TOPBP1-203ENST00000503464 MVPQ14764 893 aaKnown RBP8.83□□□□□ -1
TOPBP1-203ENST00000503464 MARCH10Q8NA82 808 aaPredicted RBP8.83□□□□□ -1
TOPBP1-203ENST00000503464 NECTIN2Q92692 538 aa8.83□□□□□ -1
TOPBP1-203ENST00000503464 CDCA7Q9BWT1 371 aaPredicted RBP8.83□□□□□ -1
TOPBP1-203ENST00000503464 USP21Q9UK80 565 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms