RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 MEGF6O75095 1541 aa24.06■■□□□ 1.44
ARHGEF28-205ENST00000503341 PRDM11Q9NQV5 511 aa24.06■■□□□ 1.44
ARHGEF28-205ENST00000503341 KCNQ3O43525 872 aa24.05■■□□□ 1.44
ARHGEF28-205ENST00000503341 SPG7Q9UQ90 795 aa24.05■■□□□ 1.44
ARHGEF28-205ENST00000503341 HOXB7P09629 217 aa24.04■■□□□ 1.44
ARHGEF28-205ENST00000503341 NECTIN2Q92692 538 aa24.04■■□□□ 1.44
ARHGEF28-205ENST00000503341 ABCA3Q99758 1704 aa24.03■■□□□ 1.44
ARHGEF28-205ENST00000503341 CACNA1FO60840 1977 aa24.03■■□□□ 1.44
ARHGEF28-205ENST00000503341 FLIIQ13045 1269 aa24.03■■□□□ 1.44
ARHGEF28-205ENST00000503341 HDGFL1Q5TGJ6 251 aa24.02■■□□□ 1.44
ARHGEF28-205ENST00000503341 SIPA1L3O60292 1781 aaPredicted RBP24.02■■□□□ 1.44
ARHGEF28-205ENST00000503341 PHKG2P15735 406 aa24.02■■□□□ 1.44
ARHGEF28-205ENST00000503341 SIRT2Q8IXJ6 389 aa24.02■■□□□ 1.44
ARHGEF28-205ENST00000503341 F6X3S4 739 aa24.01■■□□□ 1.43
ARHGEF28-205ENST00000503341 WDR17Q8IZU2 1322 aa24.01■■□□□ 1.43
ARHGEF28-205ENST00000503341 CCT4P50991 539 aaKnown RBP24■■□□□ 1.43
ARHGEF28-205ENST00000503341 ANP32AP39687 249 aaKnown RBP24■■□□□ 1.43
ARHGEF28-205ENST00000503341 CHMP4AQ9BY43 222 aa24■■□□□ 1.43
ARHGEF28-205ENST00000503341 IFNL2Q8IZJ0 200 aa23.99■■□□□ 1.43
ARHGEF28-205ENST00000503341 KDM6AO15550 1401 aaPredicted RBP23.99■■□□□ 1.43
ARHGEF28-205ENST00000503341 MSH5O43196 834 aa23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 NUCB1Q02818 461 aa23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 FKBP5Q13451 457 aaPredicted RBP23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 GCC1Q96CN9 775 aa23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 PKD1L3Q7Z443 1732 aa23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 COL5A2P05997 1499 aaPredicted RBP23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 HEG1Q9ULI3 1381 aa23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 SLC4A10Q6U841 1118 aa23.98■■□□□ 1.43
ARHGEF28-205ENST00000503341 SCN11AQ9UI33 1791 aa23.97■■□□□ 1.43
ARHGEF28-205ENST00000503341 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
ARHGEF28-205ENST00000503341 MEIS3Q99687 375 aa23.96■■□□□ 1.43
ARHGEF28-205ENST00000503341 CYP27B1O15528 508 aa23.96■■□□□ 1.43
ARHGEF28-205ENST00000503341 TOM1L2Q6ZVM7 507 aa23.96■■□□□ 1.43
ARHGEF28-205ENST00000503341 SLC52A2Q9HAB3 445 aa23.96■■□□□ 1.43
ARHGEF28-205ENST00000503341 ATP10DQ9P241 1426 aa23.95■■□□□ 1.42
ARHGEF28-205ENST00000503341 GIGYF1O75420 1035 aaPredicted RBP23.94■■□□□ 1.42
ARHGEF28-205ENST00000503341 RPAP2Q8IXW5 612 aaPredicted RBP23.94■■□□□ 1.42
ARHGEF28-205ENST00000503341 ANKRD44Q8N8A2 993 aa23.94■■□□□ 1.42
ARHGEF28-205ENST00000503341 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
ARHGEF28-205ENST00000503341 NPM2Q86SE8 214 aaKnown RBP23.94■■□□□ 1.42
ARHGEF28-205ENST00000503341 CHD1LQ86WJ1 897 aa23.94■■□□□ 1.42
ARHGEF28-205ENST00000503341 LTBP4Q8N2S1 1624 aa23.94■■□□□ 1.42
ARHGEF28-205ENST00000503341 DCAF5Q96JK2 942 aa23.93■■□□□ 1.42
ARHGEF28-205ENST00000503341 CHPF2Q9P2E5 772 aa23.93■■□□□ 1.42
ARHGEF28-205ENST00000503341 ROBO1Q9Y6N7 1651 aa23.92■■□□□ 1.42
ARHGEF28-205ENST00000503341 HSP90AB1P08238 724 aaKnown RBP23.92■■□□□ 1.42
ARHGEF28-205ENST00000503341 CEP85Q6P2H3 762 aa23.92■■□□□ 1.42
ARHGEF28-205ENST00000503341 CARD10Q9BWT7 1032 aa23.92■■□□□ 1.42
ARHGEF28-205ENST00000503341 PXDNLA1KZ92 1463 aa23.91■■□□□ 1.42
ARHGEF28-205ENST00000503341 NFATC2IPQ8NCF5 419 aa23.91■■□□□ 1.42
ARHGEF28-205ENST00000503341 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
ARHGEF28-205ENST00000503341 IPO9Q96P70 1041 aaKnown RBP23.9■■□□□ 1.42
ARHGEF28-205ENST00000503341 LNPKQ9C0E8 428 aa23.9■■□□□ 1.42
ARHGEF28-205ENST00000503341 MRC1P22897 1456 aa23.9■■□□□ 1.42
ARHGEF28-205ENST00000503341 ANKRD45Q5TZF3 282 aa23.9■■□□□ 1.42
ARHGEF28-205ENST00000503341 ZNF790Q6PG37 636 aa23.9■■□□□ 1.42
ARHGEF28-205ENST00000503341 DCTPP1Q9H773 170 aa23.9■■□□□ 1.42
ARHGEF28-205ENST00000503341 N4BP2Q86UW6 1770 aaPredicted RBP23.89■■□□□ 1.42
ARHGEF28-205ENST00000503341 DBF4Q9UBU7 674 aaPredicted RBP23.89■■□□□ 1.42
ARHGEF28-205ENST00000503341 AHDC1Q5TGY3 1603 aaPredicted RBP23.88■■□□□ 1.41
ARHGEF28-205ENST00000503341 EVA1CP58658 441 aa23.88■■□□□ 1.41
ARHGEF28-205ENST00000503341 SLC39A6Q13433 755 aa23.88■■□□□ 1.41
ARHGEF28-205ENST00000503341 LARP1Q6PKG0 1096 aaKnown RBP23.88■■□□□ 1.41
ARHGEF28-205ENST00000503341 ZCRB1Q8TBF4 217 aaKnown RBP23.88■■□□□ 1.41
ARHGEF28-205ENST00000503341 STRN4Q9NRL3 753 aa23.88■■□□□ 1.41
ARHGEF28-205ENST00000503341 PRAMEF22A3QJZ6 481 aa23.87■■□□□ 1.41
ARHGEF28-205ENST00000503341 GNAI3P08754 354 aa23.86■■□□□ 1.41
ARHGEF28-205ENST00000503341 IL2RBP14784 551 aa23.86■■□□□ 1.41
ARHGEF28-205ENST00000503341 PCDH11XQ9BZA7 1347 aa23.86■■□□□ 1.41
ARHGEF28-205ENST00000503341 PCDH11YQ9BZA8 1340 aa23.86■■□□□ 1.41
ARHGEF28-205ENST00000503341 ANXA1P04083 346 aa23.85■■□□□ 1.41
ARHGEF28-205ENST00000503341 GNAI2P04899 355 aa23.85■■□□□ 1.41
ARHGEF28-205ENST00000503341 CABP4P57796 275 aa23.83■■□□□ 1.41
ARHGEF28-205ENST00000503341 PI4KAP2A4QPH2 592 aa23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 PI4KAP1Q8N8J0 262 aa23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 DNAAF4Q8WXU2 420 aa23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 USP44Q9H0E7 712 aa23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 COL22A1Q8NFW1 1626 aaPredicted RBP23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 SEC24BO95487 1268 aa23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 PROSER3Q2NL68 480 aa23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 SRCIN1Q9C0H9 1055 aa23.82■■□□□ 1.4
ARHGEF28-205ENST00000503341 HMMRO75330 724 aa23.81■■□□□ 1.4
ARHGEF28-205ENST00000503341 NKX1-1Q15270 411 aaPredicted RBP23.81■■□□□ 1.4
ARHGEF28-205ENST00000503341 ZNF496Q96IT1 587 aaPredicted RBP23.81■■□□□ 1.4
ARHGEF28-205ENST00000503341 HYPKQ9NX55 129 aa23.81■■□□□ 1.4
ARHGEF28-205ENST00000503341 ADCY9O60503 1353 aa23.81■■□□□ 1.4
ARHGEF28-205ENST00000503341 BEND3Q5T5X7 828 aa23.8■■□□□ 1.4
ARHGEF28-205ENST00000503341 DDX21Q9NR30 783 aaKnown RBP eCLIP23.8■■□□□ 1.4
ARHGEF28-205ENST00000503341 BTG4Q9NY30 223 aa23.8■■□□□ 1.4
ARHGEF28-205ENST00000503341 PDIA6Q15084 440 aa23.8■■□□□ 1.4
ARHGEF28-205ENST00000503341 TTC5Q8N0Z6 440 aa23.8■■□□□ 1.4
ARHGEF28-205ENST00000503341 C5P01031 1676 aa23.79■■□□□ 1.4
ARHGEF28-205ENST00000503341 COL14A1Q05707 1796 aaKnown RBP23.79■■□□□ 1.4
ARHGEF28-205ENST00000503341 SHANK3Q9BYB0 1731 aa23.78■■□□□ 1.4
ARHGEF28-205ENST00000503341 ERVV-2B6SEH9 535 aa23.77■■□□□ 1.4
ARHGEF28-205ENST00000503341 SNRPA1P09661 255 aaKnown RBP23.77■■□□□ 1.4
ARHGEF28-205ENST00000503341 UBTFL1P0CB47 393 aaPredicted RBP23.77■■□□□ 1.4
ARHGEF28-205ENST00000503341 ATP8B2P98198 1209 aa23.77■■□□□ 1.4
ARHGEF28-205ENST00000503341 KSR2Q6VAB6 950 aa23.77■■□□□ 1.4
ARHGEF28-205ENST00000503341 FMNL2Q96PY5 1086 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms