RNA–Protein interactions for RNA: ENST00000503236.1

EXOSC9-204, Transcript of exosome component 9, humanhuman

TSL 3

Gene EXOSC9, Length 644 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-204ENST00000503236 CCDC85AQ96PX6 553 aaPredicted RBP8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
EXOSC9-204ENST00000503236 NR3C2P08235 984 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 BMP2P12643 396 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 GTF2IP78347 998 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 GPR161Q8N6U8 529 aaKnown RBP8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 ZMIZ1Q9ULJ6 1067 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 MTMR7Q9Y216 660 aa8.1□□□□□ -1.11
EXOSC9-204ENST00000503236 RNF225M0QZC1 329 aaPredicted RBP8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 UPP2O95045 317 aa8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 SEC13P55735 322 aa8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 DPYDQ12882 1025 aa8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 SIX5Q8N196 739 aa8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 ZNF594Q96JF6 807 aaPredicted RBP8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 DNMT3LQ9UJW3 386 aa8.09□□□□□ -1.11
EXOSC9-204ENST00000503236 SOS2Q07890 1332 aaPredicted RBP8.08□□□□□ -1.12
EXOSC9-204ENST00000503236 NR5A1Q13285 461 aa8.08□□□□□ -1.12
EXOSC9-204ENST00000503236 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
EXOSC9-204ENST00000503236 ARID4AP29374 1257 aaPredicted RBP8.07□□□□□ -1.12
EXOSC9-204ENST00000503236 GRM5P41594 1212 aa8.07□□□□□ -1.12
EXOSC9-204ENST00000503236 CLDN10P78369 228 aa8.07□□□□□ -1.12
EXOSC9-204ENST00000503236 CCDC102BQ68D86 513 aa8.07□□□□□ -1.12
EXOSC9-204ENST00000503236 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
EXOSC9-204ENST00000503236 RANGAP1P46060 587 aaPredicted RBP8.06□□□□□ -1.12
EXOSC9-204ENST00000503236 RAB15P59190 212 aa8.06□□□□□ -1.12
EXOSC9-204ENST00000503236 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
EXOSC9-204ENST00000503236 GNEQ9Y223 722 aaKnown RBP8.06□□□□□ -1.12
EXOSC9-204ENST00000503236 CARNS1A5YM72 827 aa8.05□□□□□ -1.12
EXOSC9-204ENST00000503236 TPCN2Q8NHX9 752 aa8.05□□□□□ -1.12
EXOSC9-204ENST00000503236 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
EXOSC9-204ENST00000503236 ATP2B4P23634 1241 aa8.04□□□□□ -1.12
EXOSC9-204ENST00000503236 SSFA2P28290 1259 aa8.04□□□□□ -1.12
EXOSC9-204ENST00000503236 INTS6LQ5JSJ4 861 aaKnown RBP8.04□□□□□ -1.12
EXOSC9-204ENST00000503236 GPAT2Q6NUI2 795 aa8.04□□□□□ -1.12
EXOSC9-204ENST00000503236 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
EXOSC9-204ENST00000503236 M0R2N6 131 aa8.03□□□□□ -1.12
EXOSC9-204ENST00000503236 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
EXOSC9-204ENST00000503236 ZBTB7BO15156 539 aaPredicted RBP8.03□□□□□ -1.12
EXOSC9-204ENST00000503236 ZNF385CQ66K41 422 aaPredicted RBP8.03□□□□□ -1.12
EXOSC9-204ENST00000503236 CC2D2BQ6DHV5 1058 aa8.03□□□□□ -1.12
EXOSC9-204ENST00000503236 SVOPQ8N4V2 548 aa8.03□□□□□ -1.12
EXOSC9-204ENST00000503236 PCDHGA11Q9Y5H2 935 aa8.03□□□□□ -1.12
EXOSC9-204ENST00000503236 BACH1O14867 736 aa8.02□□□□□ -1.13
EXOSC9-204ENST00000503236 FSHRP23945 695 aa8.02□□□□□ -1.13
EXOSC9-204ENST00000503236 IRS1P35568 1242 aa8.02□□□□□ -1.13
EXOSC9-204ENST00000503236 PTSQ03393 145 aa8.02□□□□□ -1.13
EXOSC9-204ENST00000503236 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.02□□□□□ -1.13
EXOSC9-204ENST00000503236 SND1Q7KZF4 910 aaKnown RBP eCLIP8.02□□□□□ -1.13
EXOSC9-204ENST00000503236 HINFPQ9BQA5 517 aa8.02□□□□□ -1.13
EXOSC9-204ENST00000503236 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 ERVK-9P63128 1117 aa8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 FAM69CQ0P6D2 419 aa8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 CCDC27Q2M243 656 aa8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 RNFT1Q5M7Z0 435 aa8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 C1orf216Q8TAB5 229 aa8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 PGPEP1Q9NXJ5 209 aa8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 DNMT3AQ9Y6K1 912 aaPredicted RBP8.01□□□□□ -1.13
EXOSC9-204ENST00000503236 TTLL8A6PVC2 850 aa8□□□□□ -1.13
EXOSC9-204ENST00000503236 ESCO1Q5FWF5 840 aa8□□□□□ -1.13
EXOSC9-204ENST00000503236 CYP2U1Q7Z449 544 aa8□□□□□ -1.13
EXOSC9-204ENST00000503236 CCDC116Q8IYX3 515 aa8□□□□□ -1.13
EXOSC9-204ENST00000503236 WHAMMQ8TF30 809 aa8□□□□□ -1.13
EXOSC9-204ENST00000503236 IGHA1P01876 353 aa7.99□□□□□ -1.13
EXOSC9-204ENST00000503236 NPM2Q86SE8 214 aaKnown RBP7.99□□□□□ -1.13
EXOSC9-204ENST00000503236 NANOS1Q8WY41 292 aaKnown RBP7.99□□□□□ -1.13
EXOSC9-204ENST00000503236 KIAA1024Q9UPX6 916 aa7.99□□□□□ -1.13
EXOSC9-204ENST00000503236 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
EXOSC9-204ENST00000503236 FIGNL2A6NMB9 653 aa7.98□□□□□ -1.13
EXOSC9-204ENST00000503236 SFI1A8K8P3 1242 aa7.98□□□□□ -1.13
EXOSC9-204ENST00000503236 DKK1O94907 266 aa7.98□□□□□ -1.13
EXOSC9-204ENST00000503236 TXNDC2Q86VQ3 553 aa7.98□□□□□ -1.13
EXOSC9-204ENST00000503236 CCDC155Q8N6L0 562 aa7.98□□□□□ -1.13
EXOSC9-204ENST00000503236 WASLO00401 505 aaPredicted RBP7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 PRMT3O60678 531 aa7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 ARHGEF15O94989 841 aa7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 GNRH1P01148 92 aa7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 CYLDQ9NQC7 956 aa7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 CXXC1Q9P0U4 656 aaPredicted RBP7.97□□□□□ -1.13
EXOSC9-204ENST00000503236 PTCD1O75127 700 aaKnown RBP7.96□□□□□ -1.14
EXOSC9-204ENST00000503236 SCTRP47872 440 aa7.96□□□□□ -1.14
EXOSC9-204ENST00000503236 PPP1R26Q5T8A7 1209 aaPredicted RBP7.96□□□□□ -1.14
EXOSC9-204ENST00000503236 PHLDB3Q6NSJ2 640 aa7.96□□□□□ -1.14
EXOSC9-204ENST00000503236 KANK3Q6NY19 840 aa7.96□□□□□ -1.14
EXOSC9-204ENST00000503236 MARSP56192 900 aaKnown RBP7.95□□□□□ -1.14
EXOSC9-204ENST00000503236 FOXK2Q01167 660 aa7.95□□□□□ -1.14
EXOSC9-204ENST00000503236 VWA5B2Q8N398 1253 aa7.95□□□□□ -1.14
EXOSC9-204ENST00000503236 ZNF784Q8NCA9 323 aaPredicted RBP7.95□□□□□ -1.14
EXOSC9-204ENST00000503236 GAS2L2Q8NHY3 880 aa7.95□□□□□ -1.14
EXOSC9-204ENST00000503236 VTI1AQ96AJ9 217 aa7.95□□□□□ -1.14
EXOSC9-204ENST00000503236 ZNF358Q9NW07 568 aa7.95□□□□□ -1.14
EXOSC9-204ENST00000503236 GDF10P55107 478 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms