RNA–Protein interactions for RNA: ENST00000503236.1

EXOSC9-204, Transcript of exosome component 9, humanhuman

TSL 3

Gene EXOSC9, Length 644 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-204ENST00000503236 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
EXOSC9-204ENST00000503236 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
EXOSC9-204ENST00000503236 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
EXOSC9-204ENST00000503236 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
EXOSC9-204ENST00000503236 FOXD1Q16676 465 aa19.64■□□□□ 0.73
EXOSC9-204ENST00000503236 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
EXOSC9-204ENST00000503236 MSH5O43196 834 aa18.48■□□□□ 0.55
EXOSC9-204ENST00000503236 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
EXOSC9-204ENST00000503236 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
EXOSC9-204ENST00000503236 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
EXOSC9-204ENST00000503236 ADRA2BP18089 450 aa18.04■□□□□ 0.48
EXOSC9-204ENST00000503236 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
EXOSC9-204ENST00000503236 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
EXOSC9-204ENST00000503236 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
EXOSC9-204ENST00000503236 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
EXOSC9-204ENST00000503236 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
EXOSC9-204ENST00000503236 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
EXOSC9-204ENST00000503236 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
EXOSC9-204ENST00000503236 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
EXOSC9-204ENST00000503236 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
EXOSC9-204ENST00000503236 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
EXOSC9-204ENST00000503236 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
EXOSC9-204ENST00000503236 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
EXOSC9-204ENST00000503236 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
EXOSC9-204ENST00000503236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.016e-12■■■□□ 15
EXOSC9-204ENST00000503236 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
EXOSC9-204ENST00000503236 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
EXOSC9-204ENST00000503236 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
EXOSC9-204ENST00000503236 CAPN15O75808 1086 aa14.66□□□□□ -0.06
EXOSC9-204ENST00000503236 DSG3P32926 999 aa14.65□□□□□ -0.06
EXOSC9-204ENST00000503236 POTEHQ6S545 545 aa14.55□□□□□ -0.08
EXOSC9-204ENST00000503236 KCNA4P22459 653 aa14.43□□□□□ -0.1
EXOSC9-204ENST00000503236 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
EXOSC9-204ENST00000503236 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
EXOSC9-204ENST00000503236 ABCB7O75027 752 aa14.3□□□□□ -0.12
EXOSC9-204ENST00000503236 APLP2Q06481 763 aa14.29□□□□□ -0.12
EXOSC9-204ENST00000503236 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
EXOSC9-204ENST00000503236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
EXOSC9-204ENST00000503236 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
EXOSC9-204ENST00000503236 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
EXOSC9-204ENST00000503236 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
EXOSC9-204ENST00000503236 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
EXOSC9-204ENST00000503236 POLA2Q14181 598 aa13.88□□□□□ -0.19
EXOSC9-204ENST00000503236 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
EXOSC9-204ENST00000503236 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
EXOSC9-204ENST00000503236 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
EXOSC9-204ENST00000503236 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
EXOSC9-204ENST00000503236 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
EXOSC9-204ENST00000503236 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
EXOSC9-204ENST00000503236 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
EXOSC9-204ENST00000503236 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
EXOSC9-204ENST00000503236 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
EXOSC9-204ENST00000503236 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
EXOSC9-204ENST00000503236 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
EXOSC9-204ENST00000503236 PIP4P2Q8N4L2 257 aa13.42□□□□□ -0.26
EXOSC9-204ENST00000503236 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
EXOSC9-204ENST00000503236 HAX1O00165 279 aa13.27□□□□□ -0.29
EXOSC9-204ENST00000503236 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
EXOSC9-204ENST00000503236 ZBTB22O15209 634 aa13.26□□□□□ -0.29
EXOSC9-204ENST00000503236 ATXN8OSP0DMR3 200 aa13.15□□□□□ -0.3
EXOSC9-204ENST00000503236 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
EXOSC9-204ENST00000503236 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
EXOSC9-204ENST00000503236 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
EXOSC9-204ENST00000503236 EVX2Q03828 476 aa13.09□□□□□ -0.31
EXOSC9-204ENST00000503236 FBLN2P98095 1184 aa13.08□□□□□ -0.32
EXOSC9-204ENST00000503236 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
EXOSC9-204ENST00000503236 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
EXOSC9-204ENST00000503236 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
EXOSC9-204ENST00000503236 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
EXOSC9-204ENST00000503236 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
EXOSC9-204ENST00000503236 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
EXOSC9-204ENST00000503236 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
EXOSC9-204ENST00000503236 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
EXOSC9-204ENST00000503236 GABBR2O75899 941 aa12.76□□□□□ -0.37
EXOSC9-204ENST00000503236 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
EXOSC9-204ENST00000503236 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
EXOSC9-204ENST00000503236 LHX8Q68G74 356 aa12.63□□□□□ -0.39
EXOSC9-204ENST00000503236 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
EXOSC9-204ENST00000503236 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
EXOSC9-204ENST00000503236 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
EXOSC9-204ENST00000503236 CLCN6P51797 869 aa12.4□□□□□ -0.42
EXOSC9-204ENST00000503236 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
EXOSC9-204ENST00000503236 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
EXOSC9-204ENST00000503236 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
EXOSC9-204ENST00000503236 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
EXOSC9-204ENST00000503236 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
EXOSC9-204ENST00000503236 FKBP8Q14318 412 aa12.23□□□□□ -0.45
EXOSC9-204ENST00000503236 GALR2O43603 387 aaPredicted RBP12.22□□□□□ -0.45
EXOSC9-204ENST00000503236 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
EXOSC9-204ENST00000503236 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-204ENST00000503236 PHF12Q96QT6 1004 aa12.12□□□□□ -0.47
EXOSC9-204ENST00000503236 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
EXOSC9-204ENST00000503236 OTUD5Q96G74 571 aa12.1□□□□□ -0.47
EXOSC9-204ENST00000503236 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
EXOSC9-204ENST00000503236 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
EXOSC9-204ENST00000503236 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
EXOSC9-204ENST00000503236 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
EXOSC9-204ENST00000503236 PELP1Q8IZL8 1130 aaKnown RBP12.02□□□□□ -0.49
EXOSC9-204ENST00000503236 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
EXOSC9-204ENST00000503236 ASTLQ6HA08 431 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms