RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 TIMELESSQ9UNS1 1208 aa19.01■□□□□ 0.63
DDR1-247ENST00000502955 KDRP35968 1356 aa19.01■□□□□ 0.63
DDR1-247ENST00000502955 KIAA1551Q9HCM1 1747 aa19■□□□□ 0.63
DDR1-247ENST00000502955 HSPA6P17066 643 aa18.99■□□□□ 0.63
DDR1-247ENST00000502955 EIF4A2Q14240 407 aaKnown RBP18.99■□□□□ 0.63
DDR1-247ENST00000502955 IFFO2Q5TF58 517 aa18.99■□□□□ 0.63
DDR1-247ENST00000502955 ERVV-2B6SEH9 535 aa18.98■□□□□ 0.63
DDR1-247ENST00000502955 PXDNLA1KZ92 1463 aa18.97■□□□□ 0.63
DDR1-247ENST00000502955 COL5A3P25940 1745 aaPredicted RBP18.97■□□□□ 0.63
DDR1-247ENST00000502955 MMP10P09238 476 aa18.97■□□□□ 0.63
DDR1-247ENST00000502955 TGFB2P61812 414 aa18.97■□□□□ 0.63
DDR1-247ENST00000502955 RC3H1Q5TC82 1133 aaKnown RBP18.96■□□□□ 0.63
DDR1-247ENST00000502955 NLGN1Q8N2Q7 840 aa18.96■□□□□ 0.63
DDR1-247ENST00000502955 ZNF526Q8TF50 670 aaPredicted RBP18.96■□□□□ 0.63
DDR1-247ENST00000502955 DCAF5Q96JK2 942 aa18.96■□□□□ 0.63
DDR1-247ENST00000502955 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
DDR1-247ENST00000502955 C10orf71Q711Q0 1435 aa18.95■□□□□ 0.62
DDR1-247ENST00000502955 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
DDR1-247ENST00000502955 ADRA2BP18089 450 aa18.95■□□□□ 0.62
DDR1-247ENST00000502955 TRAPPC3LQ5T215 181 aa18.95■□□□□ 0.62
DDR1-247ENST00000502955 SLC4A9Q96Q91 983 aa18.95■□□□□ 0.62
DDR1-247ENST00000502955 WWC3Q9ULE0 1092 aa18.95■□□□□ 0.62
DDR1-247ENST00000502955 KIF3CO14782 793 aa18.94■□□□□ 0.62
DDR1-247ENST00000502955 CNTNAP4Q9C0A0 1308 aa18.94■□□□□ 0.62
DDR1-247ENST00000502955 N4BP2Q86UW6 1770 aaPredicted RBP18.93■□□□□ 0.62
DDR1-247ENST00000502955 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
DDR1-247ENST00000502955 C4AP0C0L4 1744 aa18.92■□□□□ 0.62
DDR1-247ENST00000502955 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
DDR1-247ENST00000502955 KDM6AO15550 1401 aaPredicted RBP18.91■□□□□ 0.62
DDR1-247ENST00000502955 GYS1P13807 737 aa18.91■□□□□ 0.62
DDR1-247ENST00000502955 PLEKHO1Q53GL0 409 aaPredicted RBP18.91■□□□□ 0.62
DDR1-247ENST00000502955 ARHGEF1Q92888 912 aaKnown RBP18.91■□□□□ 0.62
DDR1-247ENST00000502955 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
DDR1-247ENST00000502955 RPS6KA4O75676 772 aa18.9■□□□□ 0.62
DDR1-247ENST00000502955 TNNT2P45379 298 aaPredicted RBP18.9■□□□□ 0.62
DDR1-247ENST00000502955 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
DDR1-247ENST00000502955 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
DDR1-247ENST00000502955 CCDC87Q9NVE4 849 aa18.89■□□□□ 0.61
DDR1-247ENST00000502955 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
DDR1-247ENST00000502955 A0A0G2JLW4 131 aa18.88■□□□□ 0.61
DDR1-247ENST00000502955 RFC4P35249 363 aa18.88■□□□□ 0.61
DDR1-247ENST00000502955 BCS1LQ9Y276 419 aa18.88■□□□□ 0.61
DDR1-247ENST00000502955 CABP4P57796 275 aa18.87■□□□□ 0.61
DDR1-247ENST00000502955 ZNF530Q6P9A1 599 aaPredicted RBP18.87■□□□□ 0.61
DDR1-247ENST00000502955 ARFGEF1Q9Y6D6 1849 aa18.87■□□□□ 0.61
DDR1-247ENST00000502955 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
DDR1-247ENST00000502955 TOMM70O94826 608 aa18.85■□□□□ 0.61
DDR1-247ENST00000502955 DPEP1P16444 411 aa18.85■□□□□ 0.61
DDR1-247ENST00000502955 KCNA3P22001 575 aa18.85■□□□□ 0.61
DDR1-247ENST00000502955 MTHFSP49914 203 aa18.84■□□□□ 0.61
DDR1-247ENST00000502955 APLP1P51693 650 aa18.84■□□□□ 0.61
DDR1-247ENST00000502955 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
DDR1-247ENST00000502955 PANK3Q9H999 370 aa18.84■□□□□ 0.61
DDR1-247ENST00000502955 TJP1Q07157 1748 aa18.83■□□□□ 0.61
DDR1-247ENST00000502955 FCHSD2O94868 740 aa18.83■□□□□ 0.6
DDR1-247ENST00000502955 C1orf141Q5JVX7 400 aa18.83■□□□□ 0.6
DDR1-247ENST00000502955 ARHGAP27Q6ZUM4 889 aa18.83■□□□□ 0.6
DDR1-247ENST00000502955 USP42Q9H9J4 1324 aaKnown RBP18.82■□□□□ 0.6
DDR1-247ENST00000502955 CRKLP46109 303 aaKnown RBP18.82■□□□□ 0.6
DDR1-247ENST00000502955 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
DDR1-247ENST00000502955 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
DDR1-247ENST00000502955 SCN11AQ9UI33 1791 aa18.82■□□□□ 0.6
DDR1-247ENST00000502955 ADAMTS7Q9UKP4 1686 aa18.82■□□□□ 0.6
DDR1-247ENST00000502955 PTCD1O75127 700 aaKnown RBP18.81■□□□□ 0.6
DDR1-247ENST00000502955 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
DDR1-247ENST00000502955 PIM2Q9P1W9 311 aa18.8■□□□□ 0.6
DDR1-247ENST00000502955 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
DDR1-247ENST00000502955 DNAJC5GQ8N7S2 189 aa18.79■□□□□ 0.6
DDR1-247ENST00000502955 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
DDR1-247ENST00000502955 DDR1Q08345 913 aa18.78■□□□□ 0.6
DDR1-247ENST00000502955 FKBP8Q14318 412 aa18.78■□□□□ 0.6
DDR1-247ENST00000502955 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
DDR1-247ENST00000502955 NMRK2Q9NPI5 230 aa18.78■□□□□ 0.6
DDR1-247ENST00000502955 SRP68Q9UHB9 627 aaKnown RBP18.78■□□□□ 0.6
DDR1-247ENST00000502955 IL13P35225 146 aa18.77■□□□□ 0.6
DDR1-247ENST00000502955 DALRD3Q5D0E6 543 aaKnown RBP18.77■□□□□ 0.6
DDR1-247ENST00000502955 C9orf131Q5VYM1 1079 aa18.77■□□□□ 0.6
DDR1-247ENST00000502955 INTS5Q6P9B9 1019 aaKnown RBP18.77■□□□□ 0.6
DDR1-247ENST00000502955 RBM46Q8TBY0 533 aaKnown RBP18.77■□□□□ 0.6
DDR1-247ENST00000502955 MRC1P22897 1456 aa18.77■□□□□ 0.59
DDR1-247ENST00000502955 POLRMTO00411 1230 aaKnown RBP18.76■□□□□ 0.59
DDR1-247ENST00000502955 TM4SF1P30408 202 aa18.76■□□□□ 0.59
DDR1-247ENST00000502955 AKAP4Q5JQC9 854 aa18.76■□□□□ 0.59
DDR1-247ENST00000502955 WDR90Q96KV7 1748 aa18.75■□□□□ 0.59
DDR1-247ENST00000502955 SBF1O95248 1867 aa18.75■□□□□ 0.59
DDR1-247ENST00000502955 SLC52A2Q9HAB3 445 aa18.74■□□□□ 0.59
DDR1-247ENST00000502955 FSTL1Q12841 308 aa18.73■□□□□ 0.59
DDR1-247ENST00000502955 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
DDR1-247ENST00000502955 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
DDR1-247ENST00000502955 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
DDR1-247ENST00000502955 KDM2BQ8NHM5 1336 aa18.73■□□□□ 0.59
DDR1-247ENST00000502955 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
DDR1-247ENST00000502955 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
DDR1-247ENST00000502955 ZPR1O75312 459 aa18.72■□□□□ 0.59
DDR1-247ENST00000502955 DNAJC10Q8IXB1 793 aa18.72■□□□□ 0.59
DDR1-247ENST00000502955 KCPQ6ZWJ8 1503 aa18.72■□□□□ 0.59
DDR1-247ENST00000502955 CYP19A1P11511 503 aaPredicted RBP18.71■□□□□ 0.59
DDR1-247ENST00000502955 CHRNA5P30532 468 aa18.71■□□□□ 0.59
DDR1-247ENST00000502955 USPL1Q5W0Q7 1092 aa18.71■□□□□ 0.59
DDR1-247ENST00000502955 C16orf71Q8IYS4 520 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms