RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 USP35Q9P2H5 1018 aa21.02■□□□□ 0.96
CSF1R-202ENST00000502660 NRAPQ86VF7 1730 aa21.01■□□□□ 0.95
CSF1R-202ENST00000502660 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
CSF1R-202ENST00000502660 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
CSF1R-202ENST00000502660 NGLY1Q96IV0 654 aa21.01■□□□□ 0.95
CSF1R-202ENST00000502660 BCL2L13Q9BXK5 485 aa21.01■□□□□ 0.95
CSF1R-202ENST00000502660 SPATA31A1Q5TZJ5 1347 aa21■□□□□ 0.95
CSF1R-202ENST00000502660 UNC5CLQ8IV45 518 aa21■□□□□ 0.95
CSF1R-202ENST00000502660 SLC52A2Q9HAB3 445 aa21■□□□□ 0.95
CSF1R-202ENST00000502660 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
CSF1R-202ENST00000502660 DISP2A7MBM2 1401 aa21■□□□□ 0.95
CSF1R-202ENST00000502660 VIRMAQ69YN4 1812 aaKnown RBP21■□□□□ 0.95
CSF1R-202ENST00000502660 FNBP4Q8N3X1 1017 aaPredicted RBP20.99■□□□□ 0.95
CSF1R-202ENST00000502660 MRPL50Q8N5N7 158 aaKnown RBP20.99■□□□□ 0.95
CSF1R-202ENST00000502660 KDM6AO15550 1401 aaPredicted RBP20.99■□□□□ 0.95
CSF1R-202ENST00000502660 SPATA31A5Q5VU36 1347 aa20.99■□□□□ 0.95
CSF1R-202ENST00000502660 SPATA31A7Q8IWB4 1347 aa20.99■□□□□ 0.95
CSF1R-202ENST00000502660 RXRBP28702 533 aa20.98■□□□□ 0.95
CSF1R-202ENST00000502660 C20orf194Q5TEA3 1177 aa20.98■□□□□ 0.95
CSF1R-202ENST00000502660 EXOC6Q8TAG9 804 aa20.98■□□□□ 0.95
CSF1R-202ENST00000502660 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
CSF1R-202ENST00000502660 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
CSF1R-202ENST00000502660 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
CSF1R-202ENST00000502660 EXOC5O00471 708 aa20.97■□□□□ 0.95
CSF1R-202ENST00000502660 EIF4A1P60842 406 aaKnown RBP20.97■□□□□ 0.95
CSF1R-202ENST00000502660 KRT24Q2M2I5 525 aa20.97■□□□□ 0.95
CSF1R-202ENST00000502660 HOXB7P09629 217 aa20.97■□□□□ 0.95
CSF1R-202ENST00000502660 BARGINQ6ZT62 677 aa20.97■□□□□ 0.95
CSF1R-202ENST00000502660 DDX54Q8TDD1 881 aaKnown RBP20.97■□□□□ 0.95
CSF1R-202ENST00000502660 NOB1Q9ULX3 412 aaKnown RBP20.97■□□□□ 0.95
CSF1R-202ENST00000502660 SIPA1L3O60292 1781 aaPredicted RBP20.96■□□□□ 0.95
CSF1R-202ENST00000502660 CABP4P57796 275 aa20.96■□□□□ 0.95
CSF1R-202ENST00000502660 VPS72Q15906 364 aa20.96■□□□□ 0.95
CSF1R-202ENST00000502660 ATF7IPQ6VMQ6 1270 aa20.96■□□□□ 0.95
CSF1R-202ENST00000502660 NFATC2IPQ8NCF5 419 aa20.96■□□□□ 0.95
CSF1R-202ENST00000502660 KDM3BQ7LBC6 1761 aa20.95■□□□□ 0.95
CSF1R-202ENST00000502660 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
CSF1R-202ENST00000502660 MRC1P22897 1456 aa20.94■□□□□ 0.94
CSF1R-202ENST00000502660 DZIP1LQ8IYY4 767 aaKnown RBP20.94■□□□□ 0.94
CSF1R-202ENST00000502660 CCDC9Q9Y3X0 531 aaKnown RBP20.94■□□□□ 0.94
CSF1R-202ENST00000502660 AAMPQ13685 434 aa20.93■□□□□ 0.94
CSF1R-202ENST00000502660 QTRT2Q9H974 415 aaKnown RBP20.93■□□□□ 0.94
CSF1R-202ENST00000502660 USP21Q9UK80 565 aa20.93■□□□□ 0.94
CSF1R-202ENST00000502660 BCL9LQ86UU0 1499 aa20.93■□□□□ 0.94
CSF1R-202ENST00000502660 KCNQ3O43525 872 aa20.92■□□□□ 0.94
CSF1R-202ENST00000502660 STK31Q9BXU1 1019 aa20.92■□□□□ 0.94
CSF1R-202ENST00000502660 SHANK3Q9BYB0 1731 aa20.92■□□□□ 0.94
CSF1R-202ENST00000502660 HEG1Q9ULI3 1381 aa20.91■□□□□ 0.94
CSF1R-202ENST00000502660 TRIM27P14373 513 aa20.91■□□□□ 0.94
CSF1R-202ENST00000502660 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
CSF1R-202ENST00000502660 ZNF790Q6PG37 636 aa20.91■□□□□ 0.94
CSF1R-202ENST00000502660 FTSJ3Q8IY81 847 aaKnown RBP20.91■□□□□ 0.94
CSF1R-202ENST00000502660 PANK1Q8TE04 598 aa20.91■□□□□ 0.94
CSF1R-202ENST00000502660 API5Q9BZZ5 524 aaKnown RBP20.91■□□□□ 0.94
CSF1R-202ENST00000502660 WNK3Q9BYP7 1800 aa20.91■□□□□ 0.94
CSF1R-202ENST00000502660 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
CSF1R-202ENST00000502660 SLC4A2P04920 1241 aa20.89■□□□□ 0.93
CSF1R-202ENST00000502660 DDB1Q16531 1140 aa20.89■□□□□ 0.93
CSF1R-202ENST00000502660 CCDC136Q96JN2 1154 aa20.89■□□□□ 0.93
CSF1R-202ENST00000502660 RGS12O14924 1447 aa20.89■□□□□ 0.93
CSF1R-202ENST00000502660 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.89■□□□□ 0.93
CSF1R-202ENST00000502660 PTPRCP08575 1304 aa20.89■□□□□ 0.93
CSF1R-202ENST00000502660 TNS2Q63HR2 1409 aa20.88■□□□□ 0.93
CSF1R-202ENST00000502660 GIGYF1O75420 1035 aaPredicted RBP20.88■□□□□ 0.93
CSF1R-202ENST00000502660 TTC5Q8N0Z6 440 aa20.88■□□□□ 0.93
CSF1R-202ENST00000502660 CLUAP1Q96AJ1 413 aa20.88■□□□□ 0.93
CSF1R-202ENST00000502660 TRPC5Q9UL62 973 aaPredicted RBP20.88■□□□□ 0.93
CSF1R-202ENST00000502660 COG6Q9Y2V7 657 aa20.88■□□□□ 0.93
CSF1R-202ENST00000502660 ATRNO75882 1429 aa20.87■□□□□ 0.93
CSF1R-202ENST00000502660 RLBP1P12271 317 aa20.87■□□□□ 0.93
CSF1R-202ENST00000502660 HDGFL1Q5TGJ6 251 aa20.87■□□□□ 0.93
CSF1R-202ENST00000502660 MVPQ14764 893 aaKnown RBP20.86■□□□□ 0.93
CSF1R-202ENST00000502660 TNNQ9UQP3 1299 aa20.86■□□□□ 0.93
CSF1R-202ENST00000502660 CACNA1FO60840 1977 aa20.86■□□□□ 0.93
CSF1R-202ENST00000502660 SLC39A6Q13433 755 aa20.85■□□□□ 0.93
CSF1R-202ENST00000502660 B4GALNT3Q6L9W6 998 aa20.85■□□□□ 0.93
CSF1R-202ENST00000502660 FMNL2Q96PY5 1086 aa20.85■□□□□ 0.93
CSF1R-202ENST00000502660 CHMP4BQ9H444 224 aaKnown RBP20.85■□□□□ 0.93
CSF1R-202ENST00000502660 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
CSF1R-202ENST00000502660 DDX19BQ9UMR2 479 aa20.85■□□□□ 0.93
CSF1R-202ENST00000502660 EIF2S2P20042 333 aaKnown RBP20.84■□□□□ 0.93
CSF1R-202ENST00000502660 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.92
CSF1R-202ENST00000502660 FAM98CQ17RN3 349 aaKnown RBP20.82■□□□□ 0.92
CSF1R-202ENST00000502660 TMEM57Q8N5G2 664 aa20.82■□□□□ 0.92
CSF1R-202ENST00000502660 NECTIN2Q92692 538 aa20.82■□□□□ 0.92
CSF1R-202ENST00000502660 ZNF496Q96IT1 587 aaPredicted RBP20.82■□□□□ 0.92
CSF1R-202ENST00000502660 DBF4Q9UBU7 674 aaPredicted RBP20.82■□□□□ 0.92
CSF1R-202ENST00000502660 ABCC4O15439 1325 aa20.82■□□□□ 0.92
CSF1R-202ENST00000502660 ITPRIPQ8IWB1 547 aa20.8■□□□□ 0.92
CSF1R-202ENST00000502660 GJD4Q96KN9 370 aaPredicted RBP20.8■□□□□ 0.92
CSF1R-202ENST00000502660 FLIIQ13045 1269 aa20.79■□□□□ 0.92
CSF1R-202ENST00000502660 G2E3Q7L622 706 aa20.79■□□□□ 0.92
CSF1R-202ENST00000502660 MARCH10Q8NA82 808 aaPredicted RBP20.79■□□□□ 0.92
CSF1R-202ENST00000502660 PIGBQ92521 554 aa20.79■□□□□ 0.92
CSF1R-202ENST00000502660 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
CSF1R-202ENST00000502660 INTS3Q68E01 1043 aaKnown RBP20.78■□□□□ 0.92
CSF1R-202ENST00000502660 UPF1Q92900 1129 aaKnown RBP eCLIP20.78■□□□□ 0.92
CSF1R-202ENST00000502660 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.92
CSF1R-202ENST00000502660 DDX21Q9NR30 783 aaKnown RBP eCLIP20.77■□□□□ 0.92
CSF1R-202ENST00000502660 HYPKQ9NX55 129 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms