RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
SGCA-203ENST00000502555 SMC4Q9NTJ3 1288 aa17.36■□□□□ 0.37
SGCA-203ENST00000502555 USP21Q9UK80 565 aa17.36■□□□□ 0.37
SGCA-203ENST00000502555 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
SGCA-203ENST00000502555 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
SGCA-203ENST00000502555 SSH1Q8WYL5 1049 aa17.35■□□□□ 0.37
SGCA-203ENST00000502555 KIF16BQ96L93 1317 aa17.34■□□□□ 0.37
SGCA-203ENST00000502555 SIPA1L3O60292 1781 aaPredicted RBP17.34■□□□□ 0.37
SGCA-203ENST00000502555 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
SGCA-203ENST00000502555 ERVV-2B6SEH9 535 aa17.34■□□□□ 0.37
SGCA-203ENST00000502555 EXOC5O00471 708 aa17.34■□□□□ 0.37
SGCA-203ENST00000502555 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
SGCA-203ENST00000502555 PLIN1O60240 522 aa17.33■□□□□ 0.36
SGCA-203ENST00000502555 HOXB7P09629 217 aa17.33■□□□□ 0.36
SGCA-203ENST00000502555 IRX6P78412 446 aaPredicted RBP17.33■□□□□ 0.36
SGCA-203ENST00000502555 AFF2P51816 1311 aa17.32■□□□□ 0.36
SGCA-203ENST00000502555 ELL2O00472 640 aaPredicted RBP17.32■□□□□ 0.36
SGCA-203ENST00000502555 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
SGCA-203ENST00000502555 CABP4P57796 275 aa17.32■□□□□ 0.36
SGCA-203ENST00000502555 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
SGCA-203ENST00000502555 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
SGCA-203ENST00000502555 BCL2L13Q9BXK5 485 aa17.32■□□□□ 0.36
SGCA-203ENST00000502555 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
SGCA-203ENST00000502555 PDE3AQ14432 1141 aa17.31■□□□□ 0.36
SGCA-203ENST00000502555 DDB1Q16531 1140 aa17.31■□□□□ 0.36
SGCA-203ENST00000502555 ATRNO75882 1429 aa17.31■□□□□ 0.36
SGCA-203ENST00000502555 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
SGCA-203ENST00000502555 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
SGCA-203ENST00000502555 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
SGCA-203ENST00000502555 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
SGCA-203ENST00000502555 MS4A1P11836 297 aa17.29■□□□□ 0.36
SGCA-203ENST00000502555 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
SGCA-203ENST00000502555 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
SGCA-203ENST00000502555 MRPL50Q8N5N7 158 aaKnown RBP17.29■□□□□ 0.36
SGCA-203ENST00000502555 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
SGCA-203ENST00000502555 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
SGCA-203ENST00000502555 KCNQ3O43525 872 aa17.27■□□□□ 0.36
SGCA-203ENST00000502555 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
SGCA-203ENST00000502555 CCDC30Q5VVM6 783 aa17.27■□□□□ 0.36
SGCA-203ENST00000502555 TTC5Q8N0Z6 440 aa17.27■□□□□ 0.36
SGCA-203ENST00000502555 ARHGAP45Q92619 1136 aa17.27■□□□□ 0.36
SGCA-203ENST00000502555 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
SGCA-203ENST00000502555 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
SGCA-203ENST00000502555 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
SGCA-203ENST00000502555 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
SGCA-203ENST00000502555 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
SGCA-203ENST00000502555 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
SGCA-203ENST00000502555 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
SGCA-203ENST00000502555 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
SGCA-203ENST00000502555 GLI3P10071 1580 aa17.25■□□□□ 0.35
SGCA-203ENST00000502555 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
SGCA-203ENST00000502555 HDGFL1Q5TGJ6 251 aa17.24■□□□□ 0.35
SGCA-203ENST00000502555 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
SGCA-203ENST00000502555 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
SGCA-203ENST00000502555 PAPPAQ13219 1627 aa17.24■□□□□ 0.35
SGCA-203ENST00000502555 TRIM27P14373 513 aa17.23■□□□□ 0.35
SGCA-203ENST00000502555 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
SGCA-203ENST00000502555 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
SGCA-203ENST00000502555 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
SGCA-203ENST00000502555 EXOC6Q8TAG9 804 aa17.23■□□□□ 0.35
SGCA-203ENST00000502555 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
SGCA-203ENST00000502555 PPP4R2Q9NY27 417 aa17.23■□□□□ 0.35
SGCA-203ENST00000502555 PTPRCP08575 1304 aa17.23■□□□□ 0.35
SGCA-203ENST00000502555 TCERG1O14776 1098 aaKnown RBP17.22■□□□□ 0.35
SGCA-203ENST00000502555 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
SGCA-203ENST00000502555 BCL9O00512 1426 aa17.22■□□□□ 0.35
SGCA-203ENST00000502555 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
SGCA-203ENST00000502555 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
SGCA-203ENST00000502555 SLC4A2P04920 1241 aa17.21■□□□□ 0.34
SGCA-203ENST00000502555 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.34
SGCA-203ENST00000502555 ZNF772Q68DY9 489 aaPredicted RBP17.21■□□□□ 0.34
SGCA-203ENST00000502555 PANK1Q8TE04 598 aa17.21■□□□□ 0.34
SGCA-203ENST00000502555 KCPQ6ZWJ8 1503 aa17.2■□□□□ 0.34
SGCA-203ENST00000502555 A0A0G2JS52 829 aa17.2■□□□□ 0.34
SGCA-203ENST00000502555 RLBP1P12271 317 aa17.2■□□□□ 0.34
SGCA-203ENST00000502555 MYT1Q01538 1121 aa17.2■□□□□ 0.34
SGCA-203ENST00000502555 AAMPQ13685 434 aa17.2■□□□□ 0.34
SGCA-203ENST00000502555 PIGBQ92521 554 aa17.2■□□□□ 0.34
SGCA-203ENST00000502555 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
SGCA-203ENST00000502555 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
SGCA-203ENST00000502555 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
SGCA-203ENST00000502555 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
SGCA-203ENST00000502555 TNNQ9UQP3 1299 aa17.19■□□□□ 0.34
SGCA-203ENST00000502555 ABCC4O15439 1325 aa17.19■□□□□ 0.34
SGCA-203ENST00000502555 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
SGCA-203ENST00000502555 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
SGCA-203ENST00000502555 PRIM1P49642 420 aaKnown RBP17.18■□□□□ 0.34
SGCA-203ENST00000502555 DBF4Q9UBU7 674 aaPredicted RBP17.18■□□□□ 0.34
SGCA-203ENST00000502555 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
SGCA-203ENST00000502555 RGS12O14924 1447 aa17.17■□□□□ 0.34
SGCA-203ENST00000502555 FLIIQ13045 1269 aa17.17■□□□□ 0.34
SGCA-203ENST00000502555 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
SGCA-203ENST00000502555 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
SGCA-203ENST00000502555 ERBB4Q15303 1308 aa17.16■□□□□ 0.34
SGCA-203ENST00000502555 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
SGCA-203ENST00000502555 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
SGCA-203ENST00000502555 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
SGCA-203ENST00000502555 ITGB4P16144 1822 aa17.15■□□□□ 0.34
SGCA-203ENST00000502555 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
SGCA-203ENST00000502555 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms