RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 EIF4G2P78344 907 aaKnown RBP eCLIP9.83□□□□□ -0.84
SH3RF1-202ENST00000502315 PLEKHO1Q53GL0 409 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-202ENST00000502315 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
SH3RF1-202ENST00000502315 TAF1LQ8IZX4 1826 aa9.83□□□□□ -0.84
SH3RF1-202ENST00000502315 TUBGCP6Q96RT7 1819 aa9.83□□□□□ -0.84
SH3RF1-202ENST00000502315 IGSF1Q8N6C5 1336 aa9.82□□□□□ -0.84
SH3RF1-202ENST00000502315 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
SH3RF1-202ENST00000502315 GOLGB1Q14789 3259 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-202ENST00000502315 PPM1GO15355 546 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-202ENST00000502315 YBX3P16989 372 aaKnown RBP eCLIP9.82□□□□□ -0.84
SH3RF1-202ENST00000502315 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
SH3RF1-202ENST00000502315 RTCBQ9Y3I0 505 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-202ENST00000502315 SENP3-EIF4A1A0A087X0R7 540 aa9.81□□□□□ -0.84
SH3RF1-202ENST00000502315 EIF4A2Q14240 407 aaKnown RBP9.81□□□□□ -0.84
SH3RF1-202ENST00000502315 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
SH3RF1-202ENST00000502315 PELP1Q8IZL8 1130 aaKnown RBP9.81□□□□□ -0.84
SH3RF1-202ENST00000502315 ATG3Q9NT62 314 aa9.81□□□□□ -0.84
SH3RF1-202ENST00000502315 ITGB4P16144 1822 aa9.81□□□□□ -0.84
SH3RF1-202ENST00000502315 MAP2P11137 1827 aaKnown RBP9.8□□□□□ -0.84
SH3RF1-202ENST00000502315 RPS6KA4O75676 772 aa9.8□□□□□ -0.84
SH3RF1-202ENST00000502315 ASAP1Q9ULH1 1129 aa9.8□□□□□ -0.84
SH3RF1-202ENST00000502315 CNTNAP4Q9C0A0 1308 aa9.8□□□□□ -0.84
SH3RF1-202ENST00000502315 ADCY9O60503 1353 aa9.79□□□□□ -0.84
SH3RF1-202ENST00000502315 UBR3Q6ZT12 1888 aa9.79□□□□□ -0.84
SH3RF1-202ENST00000502315 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
SH3RF1-202ENST00000502315 GPBP1L1Q9HC44 474 aaPredicted RBP9.79□□□□□ -0.84
SH3RF1-202ENST00000502315 KDRP35968 1356 aa9.78□□□□□ -0.84
SH3RF1-202ENST00000502315 GNPATO15228 680 aa9.78□□□□□ -0.84
SH3RF1-202ENST00000502315 ITPK1Q13572 414 aa9.78□□□□□ -0.84
SH3RF1-202ENST00000502315 C1orf141Q5JVX7 400 aa9.78□□□□□ -0.84
SH3RF1-202ENST00000502315 MSL1Q68DK7 614 aa9.78□□□□□ -0.84
SH3RF1-202ENST00000502315 PANK3Q9H999 370 aa9.78□□□□□ -0.84
SH3RF1-202ENST00000502315 TOGARAM1Q9Y4F4 1720 aa9.78□□□□□ -0.84
SH3RF1-202ENST00000502315 RFC4P35249 363 aa9.77□□□□□ -0.85
SH3RF1-202ENST00000502315 MTHFSP49914 203 aa9.77□□□□□ -0.85
SH3RF1-202ENST00000502315 CABP4P57796 275 aa9.77□□□□□ -0.85
SH3RF1-202ENST00000502315 CCDC87Q9NVE4 849 aa9.77□□□□□ -0.85
SH3RF1-202ENST00000502315 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.85
SH3RF1-202ENST00000502315 ATP10DQ9P241 1426 aa9.76□□□□□ -0.85
SH3RF1-202ENST00000502315 PHF14O94880 888 aa9.76□□□□□ -0.85
SH3RF1-202ENST00000502315 MMP10P09238 476 aa9.76□□□□□ -0.85
SH3RF1-202ENST00000502315 MORC1Q86VD1 984 aa9.76□□□□□ -0.85
SH3RF1-202ENST00000502315 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
SH3RF1-202ENST00000502315 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
SH3RF1-202ENST00000502315 CICQ96RK0 1608 aaPredicted RBP9.75□□□□□ -0.85
SH3RF1-202ENST00000502315 HSPA6P17066 643 aa9.75□□□□□ -0.85
SH3RF1-202ENST00000502315 AKAP4Q5JQC9 854 aa9.75□□□□□ -0.85
SH3RF1-202ENST00000502315 ZNF530Q6P9A1 599 aaPredicted RBP9.75□□□□□ -0.85
SH3RF1-202ENST00000502315 AMIGO3Q86WK7 504 aa9.75□□□□□ -0.85
SH3RF1-202ENST00000502315 HSPA5P11021 654 aaKnown RBP9.74□□□□□ -0.85
SH3RF1-202ENST00000502315 GYS1P13807 737 aa9.74□□□□□ -0.85
SH3RF1-202ENST00000502315 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
SH3RF1-202ENST00000502315 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
SH3RF1-202ENST00000502315 KIF13BQ9NQT8 1826 aa9.74□□□□□ -0.85
SH3RF1-202ENST00000502315 C10orf71Q711Q0 1435 aa9.73□□□□□ -0.85
SH3RF1-202ENST00000502315 TOMM70O94826 608 aa9.73□□□□□ -0.85
SH3RF1-202ENST00000502315 IL13P35225 146 aa9.73□□□□□ -0.85
SH3RF1-202ENST00000502315 SLC4A9Q96Q91 983 aa9.73□□□□□ -0.85
SH3RF1-202ENST00000502315 PIM2Q9P1W9 311 aa9.73□□□□□ -0.85
SH3RF1-202ENST00000502315 TNNT2P45379 298 aaPredicted RBP9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 NFATC2IPQ8NCF5 419 aa9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 SLC52A2Q9HAB3 445 aa9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 ZNF219Q9P2Y4 722 aaPredicted RBP9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 PDZRN3Q9UPQ7 1066 aa9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 NPC1L1Q9UHC9 1359 aa9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 KDM6AO15550 1401 aaPredicted RBP9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
SH3RF1-202ENST00000502315 KCNA4P22459 653 aa9.71□□□□□ -0.86
SH3RF1-202ENST00000502315 TM4SF1P30408 202 aa9.71□□□□□ -0.86
SH3RF1-202ENST00000502315 CRKLP46109 303 aaKnown RBP9.71□□□□□ -0.86
SH3RF1-202ENST00000502315 APLP1P51693 650 aa9.71□□□□□ -0.86
SH3RF1-202ENST00000502315 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.86
SH3RF1-202ENST00000502315 TEX13AQ9BXU3 409 aaPredicted RBP9.71□□□□□ -0.86
SH3RF1-202ENST00000502315 USP42Q9H9J4 1324 aaKnown RBP9.71□□□□□ -0.86
SH3RF1-202ENST00000502315 COL5A3P25940 1745 aaPredicted RBP9.7□□□□□ -0.86
SH3RF1-202ENST00000502315 KIF3CO14782 793 aa9.7□□□□□ -0.86
SH3RF1-202ENST00000502315 ZPR1O75312 459 aa9.7□□□□□ -0.86
SH3RF1-202ENST00000502315 KCNA3P22001 575 aa9.7□□□□□ -0.86
SH3RF1-202ENST00000502315 IFFO2Q5TF58 517 aa9.7□□□□□ -0.86
SH3RF1-202ENST00000502315 POLR3GLQ9BT43 218 aa9.7□□□□□ -0.86
SH3RF1-202ENST00000502315 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
SH3RF1-202ENST00000502315 A0A0G2JLW4 131 aa9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 PTCD1O75127 700 aaKnown RBP9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 FCHSD2O94868 740 aa9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 FSTL1Q12841 308 aa9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 DALRD3Q5D0E6 543 aaKnown RBP9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 PCGF6Q9BYE7 350 aa9.69□□□□□ -0.86
SH3RF1-202ENST00000502315 C4AP0C0L4 1744 aa9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 KDM2BQ8NHM5 1336 aa9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 A0A087WZG4 1122 aa9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 RNMTO43148 476 aaKnown RBP9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 DIAPH1O60610 1272 aaKnown RBP9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 STARD3NLO95772 234 aa9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 DPEP1P16444 411 aa9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 ARHGAP27Q6ZUM4 889 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms