RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TMEM132EQ6IEE7 984 aa7.54□□□□□ -1.2
CSTF1-207ENST00000498689 TRPC6Q9Y210 931 aa7.54□□□□□ -1.2
CSTF1-207ENST00000498689 CPDO75976 1380 aa7.54□□□□□ -1.2
CSTF1-207ENST00000498689 PASKQ96RG2 1323 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 WDR33Q9C0J8 1336 aaKnown RBP7.53□□□□□ -1.2
CSTF1-207ENST00000498689 TRPM7Q96QT4 1865 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 ANKRD50Q9ULJ7 1429 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 MAP2K1Q02750 393 aaPredicted RBP7.53□□□□□ -1.2
CSTF1-207ENST00000498689 SLC27A3Q5K4L6 730 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 POTEGQ6S5H5 508 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 TOM1L2Q6ZVM7 507 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 AMIGO3Q86WK7 504 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 RASEFQ8IZ41 740 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 ANKRD30BQ9BXX2 1392 aa7.53□□□□□ -1.2
CSTF1-207ENST00000498689 LAMA2P24043 3122 aaKnown RBP7.52□□□□□ -1.21
CSTF1-207ENST00000498689 MAP3K13O43283 966 aa7.52□□□□□ -1.21
CSTF1-207ENST00000498689 FCHSD2O94868 740 aa7.52□□□□□ -1.21
CSTF1-207ENST00000498689 SAFB2Q14151 953 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSTF1-207ENST00000498689 PLCD3Q8N3E9 789 aa7.52□□□□□ -1.21
CSTF1-207ENST00000498689 C4BP0C0L5 1744 aa7.52□□□□□ -1.21
CSTF1-207ENST00000498689 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
CSTF1-207ENST00000498689 ANKARQ7Z5J8 1434 aa7.52□□□□□ -1.21
CSTF1-207ENST00000498689 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
CSTF1-207ENST00000498689 ABCC11Q96J66 1382 aa7.51□□□□□ -1.21
CSTF1-207ENST00000498689 ZBTB7CA1YPR0 619 aa7.51□□□□□ -1.21
CSTF1-207ENST00000498689 EXOC5O00471 708 aa7.51□□□□□ -1.21
CSTF1-207ENST00000498689 VGFO15240 615 aaPredicted RBP7.51□□□□□ -1.21
CSTF1-207ENST00000498689 BMP2KQ9NSY1 1161 aaPredicted RBP7.51□□□□□ -1.21
CSTF1-207ENST00000498689 GLTPD2A6NH11 291 aa7.5□□□□□ -1.21
CSTF1-207ENST00000498689 DPEP1P16444 411 aa7.5□□□□□ -1.21
CSTF1-207ENST00000498689 MAMSTRQ6ZN01 415 aa7.5□□□□□ -1.21
CSTF1-207ENST00000498689 HTTP42858 3142 aa7.5□□□□□ -1.21
CSTF1-207ENST00000498689 SCN11AQ9UI33 1791 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 RASSF10A6NK89 507 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 TMEM88BA6NKF7 163 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 RASSF7Q02833 373 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 DEFB115Q30KQ5 88 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 SCUBE2Q9NQ36 999 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 AXIN2Q9Y2T1 843 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 YTHDC2Q9H6S0 1430 aaKnown RBP7.49□□□□□ -1.21
CSTF1-207ENST00000498689 PRUNE2Q8WUY3 3088 aa7.49□□□□□ -1.21
CSTF1-207ENST00000498689 ADAMTSL1Q8N6G6 1762 aa7.48□□□□□ -1.21
CSTF1-207ENST00000498689 SLIT3O75094 1523 aa7.48□□□□□ -1.21
CSTF1-207ENST00000498689 SCN4AP35499 1836 aa7.48□□□□□ -1.21
CSTF1-207ENST00000498689 KDM6AO15550 1401 aaPredicted RBP7.48□□□□□ -1.21
CSTF1-207ENST00000498689 KCNA3P22001 575 aa7.48□□□□□ -1.21
CSTF1-207ENST00000498689 NGDNQ8NEJ9 315 aaKnown RBP7.48□□□□□ -1.21
CSTF1-207ENST00000498689 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
CSTF1-207ENST00000498689 RAPGEFL1Q9UHV5 662 aa7.48□□□□□ -1.21
CSTF1-207ENST00000498689 AKAP11Q9UKA4 1901 aa7.48□□□□□ -1.21
CSTF1-207ENST00000498689 WDR17Q8IZU2 1322 aa7.48□□□□□ -1.21
CSTF1-207ENST00000498689 C4AP0C0L4 1744 aa7.47□□□□□ -1.21
CSTF1-207ENST00000498689 PAPPA2Q9BXP8 1791 aa7.47□□□□□ -1.21
CSTF1-207ENST00000498689 FAM163AQ96GL9 167 aaPredicted RBP7.47□□□□□ -1.21
CSTF1-207ENST00000498689 CDCA7Q9BWT1 371 aaPredicted RBP7.47□□□□□ -1.21
CSTF1-207ENST00000498689 CCNL1Q9UK58 526 aaPredicted RBP7.47□□□□□ -1.21
CSTF1-207ENST00000498689 NSD2O96028 1365 aa7.46□□□□□ -1.21
CSTF1-207ENST00000498689 PPIP5K1Q6PFW1 1433 aa7.46□□□□□ -1.21
CSTF1-207ENST00000498689 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.22
CSTF1-207ENST00000498689 TIE1P35590 1138 aa7.46□□□□□ -1.22
CSTF1-207ENST00000498689 GRM1Q13255 1194 aa7.46□□□□□ -1.22
CSTF1-207ENST00000498689 DCAF5Q96JK2 942 aa7.46□□□□□ -1.22
CSTF1-207ENST00000498689 BEGAINQ9BUH8 593 aa7.46□□□□□ -1.22
CSTF1-207ENST00000498689 COLQQ9Y215 455 aaPredicted RBP7.46□□□□□ -1.22
CSTF1-207ENST00000498689 ADGRF5Q8IZF2 1346 aa7.46□□□□□ -1.22
CSTF1-207ENST00000498689 VPS8Q8N3P4 1428 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 POTEFA5A3E0 1075 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 AOC2O75106 756 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 SEC24BO95487 1268 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 GCP02774 474 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 DLEC1Q9Y238 1755 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 ITGB4P16144 1822 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 CACNA1SQ13698 1873 aa7.45□□□□□ -1.22
CSTF1-207ENST00000498689 TTLL13PA6NNM8 815 aa7.44□□□□□ -1.22
CSTF1-207ENST00000498689 TGFB2P61812 414 aa7.44□□□□□ -1.22
CSTF1-207ENST00000498689 KANK4Q5T7N3 995 aaPredicted RBP7.44□□□□□ -1.22
CSTF1-207ENST00000498689 CYP4F22Q6NT55 531 aa7.44□□□□□ -1.22
CSTF1-207ENST00000498689 CAPNS2Q96L46 248 aa7.44□□□□□ -1.22
CSTF1-207ENST00000498689 PCDHB13Q9Y5F0 798 aa7.44□□□□□ -1.22
CSTF1-207ENST00000498689 FER1L6Q2WGJ9 1857 aa7.44□□□□□ -1.22
CSTF1-207ENST00000498689 PHF14O94880 888 aa7.43□□□□□ -1.22
CSTF1-207ENST00000498689 GPR101Q96P66 508 aaPredicted RBP7.43□□□□□ -1.22
CSTF1-207ENST00000498689 CARD10Q9BWT7 1032 aa7.43□□□□□ -1.22
CSTF1-207ENST00000498689 NUP155O75694 1391 aa7.43□□□□□ -1.22
CSTF1-207ENST00000498689 RBBP6Q7Z6E9 1792 aaKnown RBP7.43□□□□□ -1.22
CSTF1-207ENST00000498689 KIAA0100Q14667 2235 aaKnown RBP7.43□□□□□ -1.22
CSTF1-207ENST00000498689 MAP2P11137 1827 aaKnown RBP7.43□□□□□ -1.22
CSTF1-207ENST00000498689 RGPD2P0DJD1 1756 aa7.42□□□□□ -1.22
CSTF1-207ENST00000498689 MMP10P09238 476 aa7.42□□□□□ -1.22
CSTF1-207ENST00000498689 ABTB2Q8N961 1025 aa7.42□□□□□ -1.22
CSTF1-207ENST00000498689 SYTL4Q96C24 671 aaPredicted RBP7.42□□□□□ -1.22
CSTF1-207ENST00000498689 PRAM1Q96QH2 718 aa7.42□□□□□ -1.22
CSTF1-207ENST00000498689 ABT1Q9ULW3 272 aaKnown RBP7.42□□□□□ -1.22
CSTF1-207ENST00000498689 ZC3H4Q9UPT8 1303 aaKnown RBP7.42□□□□□ -1.22
CSTF1-207ENST00000498689 COL9A1P20849 921 aa7.41□□□□□ -1.22
CSTF1-207ENST00000498689 PRIM1P49642 420 aaKnown RBP7.41□□□□□ -1.22
CSTF1-207ENST00000498689 FMR1Q06787 632 aaKnown RBP eCLIP7.41□□□□□ -1.22
CSTF1-207ENST00000498689 PAXIP1Q6ZW49 1069 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-207ENST00000498689 PRDM6Q9NQX0 595 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms