RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 ZNF853P0CG23 659 aa11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 DCTN1Q14203 1278 aa11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 AKAP4Q5JQC9 854 aa11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 CARD10Q9BWT7 1032 aa11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 SPG7Q9UQ90 795 aa11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
TUBA4A-210ENST00000498660 EXOSC9Q06265 439 aaKnown RBP11.37□□□□□ -0.59
TUBA4A-210ENST00000498660 MBIPQ9NS73 344 aa11.37□□□□□ -0.59
TUBA4A-210ENST00000498660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.59
TUBA4A-210ENST00000498660 CEMIPQ8WUJ3 1361 aa11.37□□□□□ -0.59
TUBA4A-210ENST00000498660 RREB1Q92766 1687 aa11.36□□□□□ -0.59
TUBA4A-210ENST00000498660 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
TUBA4A-210ENST00000498660 MRC1P22897 1456 aa11.36□□□□□ -0.59
TUBA4A-210ENST00000498660 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
TUBA4A-210ENST00000498660 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
TUBA4A-210ENST00000498660 BABAM1Q9NWV8 329 aa11.35□□□□□ -0.59
TUBA4A-210ENST00000498660 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
TUBA4A-210ENST00000498660 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
TUBA4A-210ENST00000498660 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
TUBA4A-210ENST00000498660 CHL1O00533 1208 aa11.34□□□□□ -0.59
TUBA4A-210ENST00000498660 RARSP54136 660 aaKnown RBP11.34□□□□□ -0.59
TUBA4A-210ENST00000498660 TSPYL4Q9UJ04 414 aa11.34□□□□□ -0.59
TUBA4A-210ENST00000498660 HSP90AB1P08238 724 aaKnown RBP11.33□□□□□ -0.6
TUBA4A-210ENST00000498660 IL2RBP14784 551 aa11.33□□□□□ -0.6
TUBA4A-210ENST00000498660 TEFQ10587 303 aa11.33□□□□□ -0.6
TUBA4A-210ENST00000498660 IFNL2Q8IZJ0 200 aa11.33□□□□□ -0.6
TUBA4A-210ENST00000498660 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
TUBA4A-210ENST00000498660 KIF16BQ96L93 1317 aa11.33□□□□□ -0.6
TUBA4A-210ENST00000498660 PHKG2P15735 406 aa11.32□□□□□ -0.6
TUBA4A-210ENST00000498660 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
TUBA4A-210ENST00000498660 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
TUBA4A-210ENST00000498660 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
TUBA4A-210ENST00000498660 SPON1Q9HCB6 807 aa11.32□□□□□ -0.6
TUBA4A-210ENST00000498660 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
TUBA4A-210ENST00000498660 TNS2Q63HR2 1409 aa11.32□□□□□ -0.6
TUBA4A-210ENST00000498660 PAPPAQ13219 1627 aa11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 PLSCR1O15162 318 aa11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 KCNQ2O43526 872 aa11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 BCAR3O75815 825 aa11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 TAF7Q15545 349 aaPredicted RBP11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 MPRIPQ6WCQ1 1025 aa11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 SOS1Q07889 1333 aaPredicted RBP11.31□□□□□ -0.6
TUBA4A-210ENST00000498660 TOGARAM1Q9Y4F4 1720 aa11.3□□□□□ -0.6
TUBA4A-210ENST00000498660 PLIN1O60240 522 aa11.3□□□□□ -0.6
TUBA4A-210ENST00000498660 YY1P25490 414 aa11.3□□□□□ -0.6
TUBA4A-210ENST00000498660 DDB1Q16531 1140 aa11.3□□□□□ -0.6
TUBA4A-210ENST00000498660 ZCRB1Q8TBF4 217 aaKnown RBP11.3□□□□□ -0.6
TUBA4A-210ENST00000498660 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 MS4A1P11836 297 aa11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 SSH1Q8WYL5 1049 aa11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 DCAF5Q96JK2 942 aa11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 CDCA7Q9BWT1 371 aaPredicted RBP11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
TUBA4A-210ENST00000498660 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 CYP27B1O15528 508 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 VAMP4O75379 141 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 PDE3AQ14432 1141 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 LGR6Q9HBX8 967 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 SBF2Q86WG5 1849 aa11.28□□□□□ -0.6
TUBA4A-210ENST00000498660 BCL9O00512 1426 aa11.27□□□□□ -0.6
TUBA4A-210ENST00000498660 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 IPO8O15397 1037 aaKnown RBP11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 PROM2Q8N271 834 aa11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 TSPYL6Q8N831 410 aa11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 SLC52A2Q9HAB3 445 aa11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 C5P01031 1676 aa11.27□□□□□ -0.61
TUBA4A-210ENST00000498660 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 ELL2O00472 640 aaPredicted RBP11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 HOXB7P09629 217 aa11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 PTF1AQ7RTS3 328 aa11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 MARCH10Q8NA82 808 aaPredicted RBP11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
TUBA4A-210ENST00000498660 ITGB4P16144 1822 aa11.25□□□□□ -0.61
TUBA4A-210ENST00000498660 KRT24Q2M2I5 525 aa11.25□□□□□ -0.61
TUBA4A-210ENST00000498660 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
TUBA4A-210ENST00000498660 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
TUBA4A-210ENST00000498660 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
TUBA4A-210ENST00000498660 CASZ1Q86V15 1759 aa11.24□□□□□ -0.61
TUBA4A-210ENST00000498660 CABP4P57796 275 aa11.24□□□□□ -0.61
TUBA4A-210ENST00000498660 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
TUBA4A-210ENST00000498660 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms