RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 C4BP0C0L5 1744 aa22.92■■□□□ 1.26
CDKN2A-209ENST00000498628 PHF14O94880 888 aa22.92■■□□□ 1.26
CDKN2A-209ENST00000498628 GPR162Q16538 588 aa22.92■■□□□ 1.26
CDKN2A-209ENST00000498628 LINC00116Q8NCU8 138 aa22.92■■□□□ 1.26
CDKN2A-209ENST00000498628 RBM42Q9BTD8 480 aaKnown RBP22.92■■□□□ 1.26
CDKN2A-209ENST00000498628 TAF1LQ8IZX4 1826 aa22.92■■□□□ 1.26
CDKN2A-209ENST00000498628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.91■■□□□ 1.26
CDKN2A-209ENST00000498628 AKAP4Q5JQC9 854 aa22.91■■□□□ 1.26
CDKN2A-209ENST00000498628 MSL1Q68DK7 614 aa22.91■■□□□ 1.26
CDKN2A-209ENST00000498628 CNGB1Q14028 1251 aaPredicted RBP22.9■■□□□ 1.26
CDKN2A-209ENST00000498628 COL24A1Q17RW2 1714 aa22.9■■□□□ 1.26
CDKN2A-209ENST00000498628 GNPATO15228 680 aa22.89■■□□□ 1.25
CDKN2A-209ENST00000498628 ITPK1Q13572 414 aa22.89■■□□□ 1.25
CDKN2A-209ENST00000498628 HMOX1P09601 288 aa22.88■■□□□ 1.25
CDKN2A-209ENST00000498628 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
CDKN2A-209ENST00000498628 RTCBQ9Y3I0 505 aaKnown RBP22.87■■□□□ 1.25
CDKN2A-209ENST00000498628 KDM6AO15550 1401 aaPredicted RBP22.87■■□□□ 1.25
CDKN2A-209ENST00000498628 TRAPPC3LQ5T215 181 aa22.86■■□□□ 1.25
CDKN2A-209ENST00000498628 RC3H1Q5TC82 1133 aaKnown RBP22.86■■□□□ 1.25
CDKN2A-209ENST00000498628 PELP1Q8IZL8 1130 aaKnown RBP22.86■■□□□ 1.25
CDKN2A-209ENST00000498628 CFAP53Q96M91 514 aa22.86■■□□□ 1.25
CDKN2A-209ENST00000498628 CD2APQ9Y5K6 639 aa22.86■■□□□ 1.25
CDKN2A-209ENST00000498628 ADRA2BP18089 450 aa22.84■■□□□ 1.25
CDKN2A-209ENST00000498628 U2SURPO15042 1029 aaKnown RBP22.83■■□□□ 1.25
CDKN2A-209ENST00000498628 GRIN3BO60391 1043 aa22.82■■□□□ 1.24
CDKN2A-209ENST00000498628 PTCD1O75127 700 aaKnown RBP22.82■■□□□ 1.24
CDKN2A-209ENST00000498628 AMIGO3Q86WK7 504 aa22.82■■□□□ 1.24
CDKN2A-209ENST00000498628 NLGN2Q8NFZ4 835 aa22.82■■□□□ 1.24
CDKN2A-209ENST00000498628 CNTNAP4Q9C0A0 1308 aa22.82■■□□□ 1.24
CDKN2A-209ENST00000498628 UBR3Q6ZT12 1888 aa22.81■■□□□ 1.24
CDKN2A-209ENST00000498628 SLC4A9Q96Q91 983 aa22.81■■□□□ 1.24
CDKN2A-209ENST00000498628 SLC52A2Q9HAB3 445 aa22.81■■□□□ 1.24
CDKN2A-209ENST00000498628 ZNF831Q5JPB2 1677 aa22.81■■□□□ 1.24
CDKN2A-209ENST00000498628 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
CDKN2A-209ENST00000498628 RPS6KA4O75676 772 aa22.8■■□□□ 1.24
CDKN2A-209ENST00000498628 MTHFSDQ2M296 383 aaKnown RBP22.8■■□□□ 1.24
CDKN2A-209ENST00000498628 SMIM5Q71RC9 77 aa22.8■■□□□ 1.24
CDKN2A-209ENST00000498628 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
CDKN2A-209ENST00000498628 RFC4P35249 363 aa22.79■■□□□ 1.24
CDKN2A-209ENST00000498628 NLGN1Q8N2Q7 840 aa22.79■■□□□ 1.24
CDKN2A-209ENST00000498628 GAS2L2Q8NHY3 880 aa22.78■■□□□ 1.24
CDKN2A-209ENST00000498628 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
CDKN2A-209ENST00000498628 ARHGEF1Q92888 912 aaKnown RBP22.76■■□□□ 1.23
CDKN2A-209ENST00000498628 SCN11AQ9UI33 1791 aa22.75■■□□□ 1.23
CDKN2A-209ENST00000498628 MMP10P09238 476 aa22.74■■□□□ 1.23
CDKN2A-209ENST00000498628 CRKLP46109 303 aaKnown RBP22.74■■□□□ 1.23
CDKN2A-209ENST00000498628 GNAT3A8MTJ3 354 aa22.73■■□□□ 1.23
CDKN2A-209ENST00000498628 COL3A1P02461 1466 aaPredicted RBP22.73■■□□□ 1.23
CDKN2A-209ENST00000498628 TEFQ10587 303 aa22.72■■□□□ 1.23
CDKN2A-209ENST00000498628 TTC5Q8N0Z6 440 aa22.72■■□□□ 1.23
CDKN2A-209ENST00000498628 CHD4Q14839 1912 aa22.72■■□□□ 1.23
CDKN2A-209ENST00000498628 PPP2R1AP30153 589 aa22.71■■□□□ 1.23
CDKN2A-209ENST00000498628 VSIG10Q8N0Z9 540 aa22.71■■□□□ 1.23
CDKN2A-209ENST00000498628 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
CDKN2A-209ENST00000498628 PARP3Q9Y6F1 533 aa22.71■■□□□ 1.23
CDKN2A-209ENST00000498628 SLC39A6Q13433 755 aa22.7■■□□□ 1.22
CDKN2A-209ENST00000498628 CCDC87Q9NVE4 849 aa22.7■■□□□ 1.22
CDKN2A-209ENST00000498628 COL5A3P25940 1745 aaPredicted RBP22.69■■□□□ 1.22
CDKN2A-209ENST00000498628 MRC1P22897 1456 aa22.69■■□□□ 1.22
CDKN2A-209ENST00000498628 GYS1P13807 737 aa22.69■■□□□ 1.22
CDKN2A-209ENST00000498628 YBX3P16989 372 aaKnown RBP eCLIP22.69■■□□□ 1.22
CDKN2A-209ENST00000498628 DNAJC10Q8IXB1 793 aa22.69■■□□□ 1.22
CDKN2A-209ENST00000498628 U2AF1L5P0DN76 240 aaPredicted RBP22.68■■□□□ 1.22
CDKN2A-209ENST00000498628 PRKAR2BP31323 418 aa22.68■■□□□ 1.22
CDKN2A-209ENST00000498628 U2AF1Q01081 240 aaKnown RBP eCLIP22.68■■□□□ 1.22
CDKN2A-209ENST00000498628 ZPR1O75312 459 aa22.67■■□□□ 1.22
CDKN2A-209ENST00000498628 TGFB2P61812 414 aa22.67■■□□□ 1.22
CDKN2A-209ENST00000498628 FCHSD2O94868 740 aa22.66■■□□□ 1.22
CDKN2A-209ENST00000498628 INTS5Q6P9B9 1019 aaKnown RBP22.66■■□□□ 1.22
CDKN2A-209ENST00000498628 TEX13AQ9BXU3 409 aaPredicted RBP22.66■■□□□ 1.22
CDKN2A-209ENST00000498628 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
CDKN2A-209ENST00000498628 STARD3NLO95772 234 aa22.65■■□□□ 1.22
CDKN2A-209ENST00000498628 NEFMP07197 916 aa22.65■■□□□ 1.22
CDKN2A-209ENST00000498628 CYP19A1P11511 503 aaPredicted RBP22.65■■□□□ 1.22
CDKN2A-209ENST00000498628 IL17REQ8NFR9 667 aa22.64■■□□□ 1.21
CDKN2A-209ENST00000498628 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.21
CDKN2A-209ENST00000498628 CICQ96RK0 1608 aaPredicted RBP22.64■■□□□ 1.21
CDKN2A-209ENST00000498628 USP42Q9H9J4 1324 aaKnown RBP22.63■■□□□ 1.21
CDKN2A-209ENST00000498628 ADAMTS7Q9UKP4 1686 aa22.63■■□□□ 1.21
CDKN2A-209ENST00000498628 ZNF790Q6PG37 636 aa22.62■■□□□ 1.21
CDKN2A-209ENST00000498628 PHACTR3Q96KR7 559 aa22.62■■□□□ 1.21
CDKN2A-209ENST00000498628 TJP1Q07157 1748 aa22.62■■□□□ 1.21
CDKN2A-209ENST00000498628 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
CDKN2A-209ENST00000498628 SOS1Q07889 1333 aaPredicted RBP22.61■■□□□ 1.21
CDKN2A-209ENST00000498628 SRP68Q9UHB9 627 aaKnown RBP22.61■■□□□ 1.21
CDKN2A-209ENST00000498628 A0A087WZG4 1122 aa22.6■■□□□ 1.21
CDKN2A-209ENST00000498628 FKBP8Q14318 412 aa22.6■■□□□ 1.21
CDKN2A-209ENST00000498628 NPM2Q86SE8 214 aaKnown RBP22.6■■□□□ 1.21
CDKN2A-209ENST00000498628 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
CDKN2A-209ENST00000498628 KCPQ6ZWJ8 1503 aa22.59■■□□□ 1.21
CDKN2A-209ENST00000498628 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
CDKN2A-209ENST00000498628 NARFQ9UHQ1 456 aa22.59■■□□□ 1.21
CDKN2A-209ENST00000498628 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
CDKN2A-209ENST00000498628 HTATSF1O43719 755 aaKnown RBP22.58■■□□□ 1.21
CDKN2A-209ENST00000498628 USPL1Q5W0Q7 1092 aa22.58■■□□□ 1.21
CDKN2A-209ENST00000498628 PNNQ9H307 717 aaKnown RBP22.58■■□□□ 1.21
CDKN2A-209ENST00000498628 WWC3Q9ULE0 1092 aa22.58■■□□□ 1.21
CDKN2A-209ENST00000498628 ZBTB1Q9Y2K1 713 aa22.58■■□□□ 1.21
CDKN2A-209ENST00000498628 C4AP0C0L4 1744 aa22.57■■□□□ 1.2
CDKN2A-209ENST00000498628 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms