RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 ITPK1Q13572 414 aa18.78■□□□□ 0.6
SHANK2-217ENST00000498519 EIF4A2Q14240 407 aaKnown RBP18.78■□□□□ 0.6
SHANK2-217ENST00000498519 AMOTQ4VCS5 1084 aa18.78■□□□□ 0.6
SHANK2-217ENST00000498519 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
SHANK2-217ENST00000498519 CEP350Q5VT06 3117 aa18.78■□□□□ 0.6
SHANK2-217ENST00000498519 RC3H1Q5TC82 1133 aaKnown RBP18.77■□□□□ 0.6
SHANK2-217ENST00000498519 HSPA6P17066 643 aa18.76■□□□□ 0.59
SHANK2-217ENST00000498519 ZNF526Q8TF50 670 aaPredicted RBP18.76■□□□□ 0.59
SHANK2-217ENST00000498519 POLR3GLQ9BT43 218 aa18.76■□□□□ 0.59
SHANK2-217ENST00000498519 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
SHANK2-217ENST00000498519 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
SHANK2-217ENST00000498519 TOGARAM1Q9Y4F4 1720 aa18.74■□□□□ 0.59
SHANK2-217ENST00000498519 RFC4P35249 363 aa18.74■□□□□ 0.59
SHANK2-217ENST00000498519 CABP4P57796 275 aa18.74■□□□□ 0.59
SHANK2-217ENST00000498519 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
SHANK2-217ENST00000498519 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
SHANK2-217ENST00000498519 TAF1LQ8IZX4 1826 aa18.73■□□□□ 0.59
SHANK2-217ENST00000498519 IFFO2Q5TF58 517 aa18.73■□□□□ 0.59
SHANK2-217ENST00000498519 WWC3Q9ULE0 1092 aa18.73■□□□□ 0.59
SHANK2-217ENST00000498519 CNTNAP4Q9C0A0 1308 aa18.73■□□□□ 0.59
SHANK2-217ENST00000498519 KDRP35968 1356 aa18.72■□□□□ 0.59
SHANK2-217ENST00000498519 RPS6KA4O75676 772 aa18.72■□□□□ 0.59
SHANK2-217ENST00000498519 C1orf141Q5JVX7 400 aa18.72■□□□□ 0.59
SHANK2-217ENST00000498519 PARP3Q9Y6F1 533 aa18.72■□□□□ 0.59
SHANK2-217ENST00000498519 ANKRD26Q9UPS8 1709 aa18.71■□□□□ 0.59
SHANK2-217ENST00000498519 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHANK2-217ENST00000498519 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
SHANK2-217ENST00000498519 ARHGEF1Q92888 912 aaKnown RBP18.71■□□□□ 0.59
SHANK2-217ENST00000498519 MTHFSP49914 203 aa18.7■□□□□ 0.58
SHANK2-217ENST00000498519 BCS1LQ9Y276 419 aa18.7■□□□□ 0.58
SHANK2-217ENST00000498519 ITGB4P16144 1822 aa18.7■□□□□ 0.58
SHANK2-217ENST00000498519 UBR3Q6ZT12 1888 aa18.69■□□□□ 0.58
SHANK2-217ENST00000498519 GYS1P13807 737 aa18.68■□□□□ 0.58
SHANK2-217ENST00000498519 MORC1Q86VD1 984 aa18.68■□□□□ 0.58
SHANK2-217ENST00000498519 PANK3Q9H999 370 aa18.68■□□□□ 0.58
SHANK2-217ENST00000498519 PXDNLA1KZ92 1463 aa18.68■□□□□ 0.58
SHANK2-217ENST00000498519 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
SHANK2-217ENST00000498519 C10orf71Q711Q0 1435 aa18.67■□□□□ 0.58
SHANK2-217ENST00000498519 A0A0G2JLW4 131 aa18.67■□□□□ 0.58
SHANK2-217ENST00000498519 KIF3CO14782 793 aa18.67■□□□□ 0.58
SHANK2-217ENST00000498519 ARHGAP27Q6ZUM4 889 aa18.67■□□□□ 0.58
SHANK2-217ENST00000498519 SLC4A9Q96Q91 983 aa18.67■□□□□ 0.58
SHANK2-217ENST00000498519 TOMM70O94826 608 aa18.66■□□□□ 0.58
SHANK2-217ENST00000498519 FCHSD2O94868 740 aa18.66■□□□□ 0.58
SHANK2-217ENST00000498519 APLP1P51693 650 aa18.66■□□□□ 0.58
SHANK2-217ENST00000498519 PTCD1O75127 700 aaKnown RBP18.65■□□□□ 0.58
SHANK2-217ENST00000498519 CICQ96RK0 1608 aaPredicted RBP18.64■□□□□ 0.57
SHANK2-217ENST00000498519 DPEP1P16444 411 aa18.64■□□□□ 0.57
SHANK2-217ENST00000498519 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.57
SHANK2-217ENST00000498519 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
SHANK2-217ENST00000498519 KNSTRNQ9Y448 316 aa18.64■□□□□ 0.57
SHANK2-217ENST00000498519 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
SHANK2-217ENST00000498519 CRKLP46109 303 aaKnown RBP18.63■□□□□ 0.57
SHANK2-217ENST00000498519 SULT6B1Q6IMI4 303 aa18.63■□□□□ 0.57
SHANK2-217ENST00000498519 KDM6AO15550 1401 aaPredicted RBP18.62■□□□□ 0.57
SHANK2-217ENST00000498519 USP42Q9H9J4 1324 aaKnown RBP18.61■□□□□ 0.57
SHANK2-217ENST00000498519 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
SHANK2-217ENST00000498519 DALRD3Q5D0E6 543 aaKnown RBP18.61■□□□□ 0.57
SHANK2-217ENST00000498519 AKAP4Q5JQC9 854 aa18.61■□□□□ 0.57
SHANK2-217ENST00000498519 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
SHANK2-217ENST00000498519 ZPR1O75312 459 aa18.6■□□□□ 0.57
SHANK2-217ENST00000498519 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-217ENST00000498519 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
SHANK2-217ENST00000498519 KDM2BQ8NHM5 1336 aa18.58■□□□□ 0.57
SHANK2-217ENST00000498519 IL13P35225 146 aa18.58■□□□□ 0.56
SHANK2-217ENST00000498519 C9orf131Q5VYM1 1079 aa18.58■□□□□ 0.56
SHANK2-217ENST00000498519 RBM46Q8TBY0 533 aaKnown RBP18.58■□□□□ 0.56
SHANK2-217ENST00000498519 KCNA3P22001 575 aa18.57■□□□□ 0.56
SHANK2-217ENST00000498519 FKBP8Q14318 412 aa18.57■□□□□ 0.56
SHANK2-217ENST00000498519 SLC52A2Q9HAB3 445 aa18.57■□□□□ 0.56
SHANK2-217ENST00000498519 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
SHANK2-217ENST00000498519 INTS5Q6P9B9 1019 aaKnown RBP18.55■□□□□ 0.56
SHANK2-217ENST00000498519 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
SHANK2-217ENST00000498519 KIF13BQ9NQT8 1826 aa18.55■□□□□ 0.56
SHANK2-217ENST00000498519 TM4SF1P30408 202 aa18.54■□□□□ 0.56
SHANK2-217ENST00000498519 DDR1Q08345 913 aa18.54■□□□□ 0.56
SHANK2-217ENST00000498519 FSTL1Q12841 308 aa18.54■□□□□ 0.56
SHANK2-217ENST00000498519 NMRK2Q9NPI5 230 aa18.54■□□□□ 0.56
SHANK2-217ENST00000498519 ZC3H4Q9UPT8 1303 aaKnown RBP18.53■□□□□ 0.56
SHANK2-217ENST00000498519 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
SHANK2-217ENST00000498519 VSIG10Q8N0Z9 540 aa18.53■□□□□ 0.56
SHANK2-217ENST00000498519 RNF181Q9P0P0 153 aa18.53■□□□□ 0.56
SHANK2-217ENST00000498519 USPL1Q5W0Q7 1092 aa18.52■□□□□ 0.56
SHANK2-217ENST00000498519 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.56
SHANK2-217ENST00000498519 NARFQ9UHQ1 456 aa18.52■□□□□ 0.56
SHANK2-217ENST00000498519 COL5A3P25940 1745 aaPredicted RBP18.52■□□□□ 0.55
SHANK2-217ENST00000498519 SOS1Q07889 1333 aaPredicted RBP18.51■□□□□ 0.55
SHANK2-217ENST00000498519 RNMTO43148 476 aaKnown RBP18.5■□□□□ 0.55
SHANK2-217ENST00000498519 CYP19A1P11511 503 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-217ENST00000498519 CHRNA5P30532 468 aa18.5■□□□□ 0.55
SHANK2-217ENST00000498519 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-217ENST00000498519 STARD3NLO95772 234 aa18.49■□□□□ 0.55
SHANK2-217ENST00000498519 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
SHANK2-217ENST00000498519 DNAJC5GQ8N7S2 189 aa18.49■□□□□ 0.55
SHANK2-217ENST00000498519 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
SHANK2-217ENST00000498519 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
SHANK2-217ENST00000498519 A0A087WZG4 1122 aa18.48■□□□□ 0.55
SHANK2-217ENST00000498519 DIAPH1O60610 1272 aaKnown RBP18.48■□□□□ 0.55
SHANK2-217ENST00000498519 COL15A1P39059 1388 aa18.47■□□□□ 0.55
SHANK2-217ENST00000498519 NFIXQ14938 502 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms