RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 ITPK1Q13572 414 aa16.69■□□□□ 0.26
THBS3-209ENST00000498500 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
THBS3-209ENST00000498500 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
THBS3-209ENST00000498500 PXDNLA1KZ92 1463 aa16.68■□□□□ 0.26
THBS3-209ENST00000498500 TGFB2P61812 414 aa16.68■□□□□ 0.26
THBS3-209ENST00000498500 ARHGAP27Q6ZUM4 889 aa16.68■□□□□ 0.26
THBS3-209ENST00000498500 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
THBS3-209ENST00000498500 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
THBS3-209ENST00000498500 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
THBS3-209ENST00000498500 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
THBS3-209ENST00000498500 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
THBS3-209ENST00000498500 WDR90Q96KV7 1748 aa16.66■□□□□ 0.26
THBS3-209ENST00000498500 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
THBS3-209ENST00000498500 NCAPD2Q15021 1401 aa16.65■□□□□ 0.26
THBS3-209ENST00000498500 CDCA8Q53HL2 280 aa16.65■□□□□ 0.26
THBS3-209ENST00000498500 DNAJC5GQ8N7S2 189 aa16.65■□□□□ 0.26
THBS3-209ENST00000498500 NMRK2Q9NPI5 230 aa16.65■□□□□ 0.26
THBS3-209ENST00000498500 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
THBS3-209ENST00000498500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
THBS3-209ENST00000498500 FCHSD2O94868 740 aa16.64■□□□□ 0.25
THBS3-209ENST00000498500 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
THBS3-209ENST00000498500 PHKG2P15735 406 aa16.64■□□□□ 0.25
THBS3-209ENST00000498500 EYA1Q99502 592 aa16.64■□□□□ 0.25
THBS3-209ENST00000498500 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
THBS3-209ENST00000498500 ANKRD26Q9UPS8 1709 aa16.64■□□□□ 0.25
THBS3-209ENST00000498500 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
THBS3-209ENST00000498500 C4AP0C0L4 1744 aa16.63■□□□□ 0.25
THBS3-209ENST00000498500 DPEP1P16444 411 aa16.63■□□□□ 0.25
THBS3-209ENST00000498500 C16orf71Q8IYS4 520 aaPredicted RBP16.63■□□□□ 0.25
THBS3-209ENST00000498500 RBM42Q9BTD8 480 aaKnown RBP16.63■□□□□ 0.25
THBS3-209ENST00000498500 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
THBS3-209ENST00000498500 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
THBS3-209ENST00000498500 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
THBS3-209ENST00000498500 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
THBS3-209ENST00000498500 RFC4P35249 363 aa16.61■□□□□ 0.25
THBS3-209ENST00000498500 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
THBS3-209ENST00000498500 ARHGEF1Q92888 912 aaKnown RBP16.61■□□□□ 0.25
THBS3-209ENST00000498500 CARD14Q9BXL6 1004 aa16.61■□□□□ 0.25
THBS3-209ENST00000498500 ZNF831Q5JPB2 1677 aa16.6■□□□□ 0.25
THBS3-209ENST00000498500 ADRA2BP18089 450 aa16.6■□□□□ 0.25
THBS3-209ENST00000498500 C9orf131Q5VYM1 1079 aa16.6■□□□□ 0.25
THBS3-209ENST00000498500 RBM46Q8TBY0 533 aaKnown RBP16.6■□□□□ 0.25
THBS3-209ENST00000498500 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
THBS3-209ENST00000498500 GYS1P13807 737 aa16.59■□□□□ 0.25
THBS3-209ENST00000498500 RC3H1Q5TC82 1133 aaKnown RBP16.59■□□□□ 0.25
THBS3-209ENST00000498500 KDRP35968 1356 aa16.59■□□□□ 0.25
THBS3-209ENST00000498500 HTRA3P83110 453 aa16.58■□□□□ 0.24
THBS3-209ENST00000498500 SLC4A9Q96Q91 983 aa16.58■□□□□ 0.24
THBS3-209ENST00000498500 PIM2Q9P1W9 311 aa16.58■□□□□ 0.24
THBS3-209ENST00000498500 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.24
THBS3-209ENST00000498500 SBF1O95248 1867 aa16.58■□□□□ 0.24
THBS3-209ENST00000498500 ERVV-2B6SEH9 535 aa16.57■□□□□ 0.24
THBS3-209ENST00000498500 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
THBS3-209ENST00000498500 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
THBS3-209ENST00000498500 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
THBS3-209ENST00000498500 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
THBS3-209ENST00000498500 KCNA3P22001 575 aa16.56■□□□□ 0.24
THBS3-209ENST00000498500 FSTL1Q12841 308 aa16.56■□□□□ 0.24
THBS3-209ENST00000498500 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
THBS3-209ENST00000498500 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
THBS3-209ENST00000498500 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
THBS3-209ENST00000498500 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
THBS3-209ENST00000498500 DALRD3Q5D0E6 543 aaKnown RBP16.55■□□□□ 0.24
THBS3-209ENST00000498500 TNRC6CQ9HCJ0 1690 aaKnown RBP16.54■□□□□ 0.24
THBS3-209ENST00000498500 CABP4P57796 275 aa16.54■□□□□ 0.24
THBS3-209ENST00000498500 COL13A1Q5TAT6 717 aaPredicted RBP16.54■□□□□ 0.24
THBS3-209ENST00000498500 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
THBS3-209ENST00000498500 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
THBS3-209ENST00000498500 RNF181Q9P0P0 153 aa16.54■□□□□ 0.24
THBS3-209ENST00000498500 CAPN15O75808 1086 aa16.53■□□□□ 0.24
THBS3-209ENST00000498500 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
THBS3-209ENST00000498500 JMYQ8N9B5 988 aa16.53■□□□□ 0.24
THBS3-209ENST00000498500 PTCD1O75127 700 aaKnown RBP16.52■□□□□ 0.24
THBS3-209ENST00000498500 PLEKHO1Q53GL0 409 aaPredicted RBP16.52■□□□□ 0.24
THBS3-209ENST00000498500 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
THBS3-209ENST00000498500 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
THBS3-209ENST00000498500 SRP68Q9UHB9 627 aaKnown RBP16.51■□□□□ 0.23
THBS3-209ENST00000498500 CHRNA5P30532 468 aa16.5■□□□□ 0.23
THBS3-209ENST00000498500 CRKLP46109 303 aaKnown RBP16.5■□□□□ 0.23
THBS3-209ENST00000498500 FKBP8Q14318 412 aa16.5■□□□□ 0.23
THBS3-209ENST00000498500 USP42Q9H9J4 1324 aaKnown RBP16.49■□□□□ 0.23
THBS3-209ENST00000498500 KDM6AO15550 1401 aaPredicted RBP16.49■□□□□ 0.23
THBS3-209ENST00000498500 MTHFSP49914 203 aa16.49■□□□□ 0.23
THBS3-209ENST00000498500 DDR1Q08345 913 aa16.49■□□□□ 0.23
THBS3-209ENST00000498500 TNS4Q8IZW8 715 aa16.49■□□□□ 0.23
THBS3-209ENST00000498500 SMC1BQ8NDV3 1235 aa16.49■□□□□ 0.23
THBS3-209ENST00000498500 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
THBS3-209ENST00000498500 TJP1Q07157 1748 aa16.48■□□□□ 0.23
THBS3-209ENST00000498500 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
THBS3-209ENST00000498500 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
THBS3-209ENST00000498500 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
THBS3-209ENST00000498500 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
THBS3-209ENST00000498500 PCNTO95613 3336 aa16.47■□□□□ 0.23
THBS3-209ENST00000498500 NFATC2IPQ8NCF5 419 aa16.47■□□□□ 0.23
THBS3-209ENST00000498500 ZPR1O75312 459 aa16.46■□□□□ 0.23
THBS3-209ENST00000498500 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.22
THBS3-209ENST00000498500 POLRMTO00411 1230 aaKnown RBP16.45■□□□□ 0.22
THBS3-209ENST00000498500 TM4SF1P30408 202 aa16.44■□□□□ 0.22
THBS3-209ENST00000498500 RASSF7Q02833 373 aa16.44■□□□□ 0.22
THBS3-209ENST00000498500 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms