RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 TNNT2P45379 298 aaPredicted RBP22.25■■□□□ 1.15
MUC1-220ENST00000498431 KDRP35968 1356 aa22.25■■□□□ 1.15
MUC1-220ENST00000498431 MMP10P09238 476 aa22.24■■□□□ 1.15
MUC1-220ENST00000498431 SLC4A9Q96Q91 983 aa22.24■■□□□ 1.15
MUC1-220ENST00000498431 KIF13BQ9NQT8 1826 aa22.23■■□□□ 1.15
MUC1-220ENST00000498431 CICQ96RK0 1608 aaPredicted RBP22.23■■□□□ 1.15
MUC1-220ENST00000498431 N4BP2Q86UW6 1770 aaPredicted RBP22.22■■□□□ 1.15
MUC1-220ENST00000498431 PXDNLA1KZ92 1463 aa22.22■■□□□ 1.15
MUC1-220ENST00000498431 POLR3GLQ9BT43 218 aa22.21■■□□□ 1.15
MUC1-220ENST00000498431 COL5A3P25940 1745 aaPredicted RBP22.2■■□□□ 1.14
MUC1-220ENST00000498431 HSPA6P17066 643 aa22.2■■□□□ 1.14
MUC1-220ENST00000498431 IFFO2Q5TF58 517 aa22.2■■□□□ 1.14
MUC1-220ENST00000498431 ZNF831Q5JPB2 1677 aa22.19■■□□□ 1.14
MUC1-220ENST00000498431 KDM6AO15550 1401 aaPredicted RBP22.18■■□□□ 1.14
MUC1-220ENST00000498431 KIF3CO14782 793 aa22.18■■□□□ 1.14
MUC1-220ENST00000498431 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
MUC1-220ENST00000498431 RBM42Q9BTD8 480 aaKnown RBP22.18■■□□□ 1.14
MUC1-220ENST00000498431 RTCBQ9Y3I0 505 aaKnown RBP22.18■■□□□ 1.14
MUC1-220ENST00000498431 C10orf71Q711Q0 1435 aa22.17■■□□□ 1.14
MUC1-220ENST00000498431 TRAPPC3LQ5T215 181 aa22.17■■□□□ 1.14
MUC1-220ENST00000498431 MYH14Q7Z406 1995 aaKnown RBP22.16■■□□□ 1.14
MUC1-220ENST00000498431 PLEKHG2Q9H7P9 1386 aa22.16■■□□□ 1.14
MUC1-220ENST00000498431 A0A0G2JLW4 131 aa22.16■■□□□ 1.14
MUC1-220ENST00000498431 ERVV-2B6SEH9 535 aa22.16■■□□□ 1.14
MUC1-220ENST00000498431 ARHGEF1Q92888 912 aaKnown RBP22.16■■□□□ 1.14
MUC1-220ENST00000498431 C4AP0C0L4 1744 aa22.15■■□□□ 1.14
MUC1-220ENST00000498431 DCAF5Q96JK2 942 aa22.15■■□□□ 1.14
MUC1-220ENST00000498431 GYS1P13807 737 aa22.14■■□□□ 1.13
MUC1-220ENST00000498431 RC3H1Q5TC82 1133 aaKnown RBP22.14■■□□□ 1.13
MUC1-220ENST00000498431 NLGN1Q8N2Q7 840 aa22.14■■□□□ 1.13
MUC1-220ENST00000498431 BCS1LQ9Y276 419 aa22.14■■□□□ 1.13
MUC1-220ENST00000498431 CNTNAP4Q9C0A0 1308 aa22.13■■□□□ 1.13
MUC1-220ENST00000498431 TGFB2P61812 414 aa22.13■■□□□ 1.13
MUC1-220ENST00000498431 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
MUC1-220ENST00000498431 BRCA1P38398 1863 aaKnown RBP22.13■■□□□ 1.13
MUC1-220ENST00000498431 RPS6KA4O75676 772 aa22.12■■□□□ 1.13
MUC1-220ENST00000498431 DPEP1P16444 411 aa22.12■■□□□ 1.13
MUC1-220ENST00000498431 PLEKHO1Q53GL0 409 aaPredicted RBP22.12■■□□□ 1.13
MUC1-220ENST00000498431 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
MUC1-220ENST00000498431 HSP90AB1P08238 724 aaKnown RBP22.11■■□□□ 1.13
MUC1-220ENST00000498431 ADRA2BP18089 450 aa22.11■■□□□ 1.13
MUC1-220ENST00000498431 CABP4P57796 275 aa22.11■■□□□ 1.13
MUC1-220ENST00000498431 TIMELESSQ9UNS1 1208 aa22.11■■□□□ 1.13
MUC1-220ENST00000498431 RFC4P35249 363 aa22.1■■□□□ 1.13
MUC1-220ENST00000498431 PANK3Q9H999 370 aa22.1■■□□□ 1.13
MUC1-220ENST00000498431 PTCD1O75127 700 aaKnown RBP22.09■■□□□ 1.13
MUC1-220ENST00000498431 ARHGAP27Q6ZUM4 889 aa22.09■■□□□ 1.13
MUC1-220ENST00000498431 CCDC87Q9NVE4 849 aa22.09■■□□□ 1.13
MUC1-220ENST00000498431 KCNA3P22001 575 aa22.08■■□□□ 1.13
MUC1-220ENST00000498431 TJP1Q07157 1748 aa22.08■■□□□ 1.12
MUC1-220ENST00000498431 FCHSD2O94868 740 aa22.07■■□□□ 1.12
MUC1-220ENST00000498431 AMOTQ4VCS5 1084 aa22.07■■□□□ 1.12
MUC1-220ENST00000498431 SRP68Q9UHB9 627 aaKnown RBP22.07■■□□□ 1.12
MUC1-220ENST00000498431 PARP3Q9Y6F1 533 aa22.07■■□□□ 1.12
MUC1-220ENST00000498431 HSPA5P11021 654 aaKnown RBP22.06■■□□□ 1.12
MUC1-220ENST00000498431 CRKLP46109 303 aaKnown RBP22.06■■□□□ 1.12
MUC1-220ENST00000498431 MTHFSP49914 203 aa22.06■■□□□ 1.12
MUC1-220ENST00000498431 NFATC2IPQ8NCF5 419 aa22.06■■□□□ 1.12
MUC1-220ENST00000498431 NMRK2Q9NPI5 230 aa22.05■■□□□ 1.12
MUC1-220ENST00000498431 ARFGEF1Q9Y6D6 1849 aa22.05■■□□□ 1.12
MUC1-220ENST00000498431 DDR1Q08345 913 aa22.04■■□□□ 1.12
MUC1-220ENST00000498431 FKBP8Q14318 412 aa22.04■■□□□ 1.12
MUC1-220ENST00000498431 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
MUC1-220ENST00000498431 ADAMTS7Q9UKP4 1686 aa22.04■■□□□ 1.12
MUC1-220ENST00000498431 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
MUC1-220ENST00000498431 USP42Q9H9J4 1324 aaKnown RBP22.03■■□□□ 1.12
MUC1-220ENST00000498431 TOMM70O94826 608 aa22.02■■□□□ 1.12
MUC1-220ENST00000498431 EIF4G2P78344 907 aaKnown RBP eCLIP22.02■■□□□ 1.12
MUC1-220ENST00000498431 SULT6B1Q6IMI4 303 aa22.02■■□□□ 1.12
MUC1-220ENST00000498431 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
MUC1-220ENST00000498431 C9orf131Q5VYM1 1079 aa22.01■■□□□ 1.11
MUC1-220ENST00000498431 APLP1P51693 650 aa22■■□□□ 1.11
MUC1-220ENST00000498431 INTS5Q6P9B9 1019 aaKnown RBP22■■□□□ 1.11
MUC1-220ENST00000498431 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
MUC1-220ENST00000498431 IL13P35225 146 aa21.99■■□□□ 1.11
MUC1-220ENST00000498431 PIM2Q9P1W9 311 aa21.99■■□□□ 1.11
MUC1-220ENST00000498431 CLSPNQ9HAW4 1339 aa21.99■■□□□ 1.11
MUC1-220ENST00000498431 CHRNA5P30532 468 aa21.98■■□□□ 1.11
MUC1-220ENST00000498431 DNAJC5GQ8N7S2 189 aa21.98■■□□□ 1.11
MUC1-220ENST00000498431 DNAJC10Q8IXB1 793 aa21.97■■□□□ 1.11
MUC1-220ENST00000498431 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
MUC1-220ENST00000498431 POLRMTO00411 1230 aaKnown RBP21.96■■□□□ 1.11
MUC1-220ENST00000498431 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
MUC1-220ENST00000498431 LGR6Q9HBX8 967 aa21.96■■□□□ 1.11
MUC1-220ENST00000498431 WDR90Q96KV7 1748 aa21.95■■□□□ 1.1
MUC1-220ENST00000498431 TM4SF1P30408 202 aa21.95■■□□□ 1.1
MUC1-220ENST00000498431 VIRMAQ69YN4 1812 aaKnown RBP21.94■■□□□ 1.1
MUC1-220ENST00000498431 SBF1O95248 1867 aa21.94■■□□□ 1.1
MUC1-220ENST00000498431 USPL1Q5W0Q7 1092 aa21.94■■□□□ 1.1
MUC1-220ENST00000498431 SLC52A2Q9HAB3 445 aa21.94■■□□□ 1.1
MUC1-220ENST00000498431 RNF181Q9P0P0 153 aa21.94■■□□□ 1.1
MUC1-220ENST00000498431 MRC1P22897 1456 aa21.93■■□□□ 1.1
MUC1-220ENST00000498431 AFDNP55196 1824 aaKnown RBP21.93■■□□□ 1.1
MUC1-220ENST00000498431 HTRA3P83110 453 aa21.93■■□□□ 1.1
MUC1-220ENST00000498431 SOS1Q07889 1333 aaPredicted RBP21.93■■□□□ 1.1
MUC1-220ENST00000498431 SLC39A6Q13433 755 aa21.93■■□□□ 1.1
MUC1-220ENST00000498431 AKAP4Q5JQC9 854 aa21.93■■□□□ 1.1
MUC1-220ENST00000498431 RBM46Q8TBY0 533 aaKnown RBP21.93■■□□□ 1.1
MUC1-220ENST00000498431 KNSTRNQ9Y448 316 aa21.93■■□□□ 1.1
MUC1-220ENST00000498431 PCNTO95613 3336 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms