RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 LMNB1P20700 586 aa12.85□□□□□ -0.35
FAM3D-205ENST00000498347 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
FAM3D-205ENST00000498347 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
FAM3D-205ENST00000498347 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
FAM3D-205ENST00000498347 RTCBQ9Y3I0 505 aaKnown RBP12.85□□□□□ -0.35
FAM3D-205ENST00000498347 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
FAM3D-205ENST00000498347 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
FAM3D-205ENST00000498347 POTECB2RU33 542 aa12.84□□□□□ -0.35
FAM3D-205ENST00000498347 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
FAM3D-205ENST00000498347 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
FAM3D-205ENST00000498347 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
FAM3D-205ENST00000498347 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
FAM3D-205ENST00000498347 TNRC6CQ9HCJ0 1690 aaKnown RBP12.83□□□□□ -0.35
FAM3D-205ENST00000498347 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
FAM3D-205ENST00000498347 GYS1P13807 737 aa12.83□□□□□ -0.36
FAM3D-205ENST00000498347 RFC4P35249 363 aa12.83□□□□□ -0.36
FAM3D-205ENST00000498347 ITPK1Q13572 414 aa12.83□□□□□ -0.36
FAM3D-205ENST00000498347 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
FAM3D-205ENST00000498347 LTN1O94822 1766 aa12.83□□□□□ -0.36
FAM3D-205ENST00000498347 MEGF6O75095 1541 aa12.83□□□□□ -0.36
FAM3D-205ENST00000498347 CNTNAP1P78357 1384 aa12.82□□□□□ -0.36
FAM3D-205ENST00000498347 CYP27B1O15528 508 aa12.82□□□□□ -0.36
FAM3D-205ENST00000498347 ADRA2BP18089 450 aa12.82□□□□□ -0.36
FAM3D-205ENST00000498347 VEGFBP49765 207 aa12.82□□□□□ -0.36
FAM3D-205ENST00000498347 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
FAM3D-205ENST00000498347 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
FAM3D-205ENST00000498347 RC3H1Q5TC82 1133 aaKnown RBP12.81□□□□□ -0.36
FAM3D-205ENST00000498347 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
FAM3D-205ENST00000498347 KIAA1551Q9HCM1 1747 aa12.81□□□□□ -0.36
FAM3D-205ENST00000498347 SBF1O95248 1867 aa12.8□□□□□ -0.36
FAM3D-205ENST00000498347 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
FAM3D-205ENST00000498347 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
FAM3D-205ENST00000498347 CHRNA5P30532 468 aa12.8□□□□□ -0.36
FAM3D-205ENST00000498347 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
FAM3D-205ENST00000498347 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
FAM3D-205ENST00000498347 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
FAM3D-205ENST00000498347 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
FAM3D-205ENST00000498347 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
FAM3D-205ENST00000498347 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 CD163L1Q9NR16 1453 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 RPS6KA4O75676 772 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 FBLN1P23142 703 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 MAP2K1Q02750 393 aaPredicted RBP12.79□□□□□ -0.36
FAM3D-205ENST00000498347 RASSF7Q02833 373 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 COG3Q96JB2 828 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 TMOD3Q9NYL9 352 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
FAM3D-205ENST00000498347 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
FAM3D-205ENST00000498347 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
FAM3D-205ENST00000498347 TMEM88BA6NKF7 163 aa12.77□□□□□ -0.37
FAM3D-205ENST00000498347 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
FAM3D-205ENST00000498347 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
FAM3D-205ENST00000498347 DEFB115Q30KQ5 88 aa12.76□□□□□ -0.37
FAM3D-205ENST00000498347 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
FAM3D-205ENST00000498347 PASKQ96RG2 1323 aa12.75□□□□□ -0.37
FAM3D-205ENST00000498347 SPG7Q9UQ90 795 aa12.75□□□□□ -0.37
FAM3D-205ENST00000498347 TTLL6Q8N841 843 aa12.74□□□□□ -0.37
FAM3D-205ENST00000498347 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
FAM3D-205ENST00000498347 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
FAM3D-205ENST00000498347 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
FAM3D-205ENST00000498347 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
FAM3D-205ENST00000498347 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
FAM3D-205ENST00000498347 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
FAM3D-205ENST00000498347 TM4SF1P30408 202 aa12.73□□□□□ -0.37
FAM3D-205ENST00000498347 DDR1Q08345 913 aa12.73□□□□□ -0.37
FAM3D-205ENST00000498347 FKBP8Q14318 412 aa12.73□□□□□ -0.37
FAM3D-205ENST00000498347 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
FAM3D-205ENST00000498347 MAP2P11137 1827 aaKnown RBP12.73□□□□□ -0.37
FAM3D-205ENST00000498347 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
FAM3D-205ENST00000498347 RRS1Q15050 365 aaKnown RBP12.72□□□□□ -0.37
FAM3D-205ENST00000498347 ERFEQ4G0M1 354 aa12.72□□□□□ -0.37
FAM3D-205ENST00000498347 LDHDQ86WU2 507 aa12.72□□□□□ -0.37
FAM3D-205ENST00000498347 BEGAINQ9BUH8 593 aa12.72□□□□□ -0.37
FAM3D-205ENST00000498347 ITGB4P16144 1822 aa12.72□□□□□ -0.37
FAM3D-205ENST00000498347 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
FAM3D-205ENST00000498347 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.37
FAM3D-205ENST00000498347 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.37
FAM3D-205ENST00000498347 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
FAM3D-205ENST00000498347 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
FAM3D-205ENST00000498347 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
FAM3D-205ENST00000498347 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
FAM3D-205ENST00000498347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.71□□□□□ -0.37
FAM3D-205ENST00000498347 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
FAM3D-205ENST00000498347 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
FAM3D-205ENST00000498347 NFKBIEO00221 500 aa12.7□□□□□ -0.38
FAM3D-205ENST00000498347 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
FAM3D-205ENST00000498347 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
FAM3D-205ENST00000498347 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
FAM3D-205ENST00000498347 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
FAM3D-205ENST00000498347 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
FAM3D-205ENST00000498347 H0YIN7 160 aa12.68□□□□□ -0.38
FAM3D-205ENST00000498347 L3MBTL2Q969R5 705 aa12.68□□□□□ -0.38
FAM3D-205ENST00000498347 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
FAM3D-205ENST00000498347 INSRP06213 1382 aa12.68□□□□□ -0.38
FAM3D-205ENST00000498347 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
FAM3D-205ENST00000498347 ERVV-2B6SEH9 535 aa12.67□□□□□ -0.38
FAM3D-205ENST00000498347 ZPR1O75312 459 aa12.67□□□□□ -0.38
FAM3D-205ENST00000498347 C2CD5Q86YS7 1000 aa12.67□□□□□ -0.38
FAM3D-205ENST00000498347 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
FAM3D-205ENST00000498347 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms