RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
CDK9-205ENST00000498339 TMF1P82094 1093 aa16.28■□□□□ 0.2
CDK9-205ENST00000498339 ASAP1Q9ULH1 1129 aa16.28■□□□□ 0.2
CDK9-205ENST00000498339 A0A0G2JLW4 131 aa16.27■□□□□ 0.2
CDK9-205ENST00000498339 ITPK1Q13572 414 aa16.27■□□□□ 0.2
CDK9-205ENST00000498339 NMRK2Q9NPI5 230 aa16.27■□□□□ 0.2
CDK9-205ENST00000498339 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
CDK9-205ENST00000498339 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.19
CDK9-205ENST00000498339 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.19
CDK9-205ENST00000498339 FCHSD2O94868 740 aa16.26■□□□□ 0.19
CDK9-205ENST00000498339 TGFB2P61812 414 aa16.26■□□□□ 0.19
CDK9-205ENST00000498339 RTCBQ9Y3I0 505 aaKnown RBP16.26■□□□□ 0.19
CDK9-205ENST00000498339 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
CDK9-205ENST00000498339 TRAPPC3LQ5T215 181 aa16.25■□□□□ 0.19
CDK9-205ENST00000498339 CCDC87Q9NVE4 849 aa16.25■□□□□ 0.19
CDK9-205ENST00000498339 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
CDK9-205ENST00000498339 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
CDK9-205ENST00000498339 NCAPD2Q15021 1401 aa16.24■□□□□ 0.19
CDK9-205ENST00000498339 CAPN15O75808 1086 aa16.23■□□□□ 0.19
CDK9-205ENST00000498339 DPEP1P16444 411 aa16.23■□□□□ 0.19
CDK9-205ENST00000498339 IFNL2Q8IZJ0 200 aa16.23■□□□□ 0.19
CDK9-205ENST00000498339 NLGN1Q8N2Q7 840 aa16.23■□□□□ 0.19
CDK9-205ENST00000498339 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
CDK9-205ENST00000498339 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
CDK9-205ENST00000498339 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
CDK9-205ENST00000498339 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
CDK9-205ENST00000498339 PHKG2P15735 406 aa16.22■□□□□ 0.19
CDK9-205ENST00000498339 RFC4P35249 363 aa16.22■□□□□ 0.19
CDK9-205ENST00000498339 HTRA3P83110 453 aa16.22■□□□□ 0.19
CDK9-205ENST00000498339 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
CDK9-205ENST00000498339 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
CDK9-205ENST00000498339 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
CDK9-205ENST00000498339 KCPQ6ZWJ8 1503 aa16.22■□□□□ 0.19
CDK9-205ENST00000498339 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
CDK9-205ENST00000498339 KDRP35968 1356 aa16.21■□□□□ 0.19
CDK9-205ENST00000498339 SBF1O95248 1867 aa16.2■□□□□ 0.18
CDK9-205ENST00000498339 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
CDK9-205ENST00000498339 PCNTO95613 3336 aa16.2■□□□□ 0.18
CDK9-205ENST00000498339 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
CDK9-205ENST00000498339 EYA1Q99502 592 aa16.2■□□□□ 0.18
CDK9-205ENST00000498339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDK9-205ENST00000498339 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CDK9-205ENST00000498339 ADRA2BP18089 450 aa16.19■□□□□ 0.18
CDK9-205ENST00000498339 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
CDK9-205ENST00000498339 GYS1P13807 737 aa16.18■□□□□ 0.18
CDK9-205ENST00000498339 RNF181Q9P0P0 153 aa16.18■□□□□ 0.18
CDK9-205ENST00000498339 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
CDK9-205ENST00000498339 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
CDK9-205ENST00000498339 FSTL1Q12841 308 aa16.17■□□□□ 0.18
CDK9-205ENST00000498339 COL13A1Q5TAT6 717 aaPredicted RBP16.17■□□□□ 0.18
CDK9-205ENST00000498339 PIM2Q9P1W9 311 aa16.17■□□□□ 0.18
CDK9-205ENST00000498339 DALRD3Q5D0E6 543 aaKnown RBP16.16■□□□□ 0.18
CDK9-205ENST00000498339 TNS4Q8IZW8 715 aa16.15■□□□□ 0.18
CDK9-205ENST00000498339 CARD14Q9BXL6 1004 aa16.15■□□□□ 0.18
CDK9-205ENST00000498339 RRAGCQ9HB90 399 aa16.15■□□□□ 0.18
CDK9-205ENST00000498339 CCDC88AQ3V6T2 1871 aa16.14■□□□□ 0.17
CDK9-205ENST00000498339 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
CDK9-205ENST00000498339 RPS6KA4O75676 772 aa16.14■□□□□ 0.17
CDK9-205ENST00000498339 TNNT2P45379 298 aaPredicted RBP16.14■□□□□ 0.17
CDK9-205ENST00000498339 RC3H1Q5TC82 1133 aaKnown RBP16.14■□□□□ 0.17
CDK9-205ENST00000498339 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
CDK9-205ENST00000498339 TJP1Q07157 1748 aa16.14■□□□□ 0.17
CDK9-205ENST00000498339 ERVV-2B6SEH9 535 aa16.13■□□□□ 0.17
CDK9-205ENST00000498339 HSP90AB1P08238 724 aaKnown RBP16.13■□□□□ 0.17
CDK9-205ENST00000498339 CABP4P57796 275 aa16.13■□□□□ 0.17
CDK9-205ENST00000498339 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
CDK9-205ENST00000498339 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
CDK9-205ENST00000498339 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
CDK9-205ENST00000498339 KCNA3P22001 575 aa16.12■□□□□ 0.17
CDK9-205ENST00000498339 EIF4A2Q14240 407 aaKnown RBP16.12■□□□□ 0.17
CDK9-205ENST00000498339 SMC1BQ8NDV3 1235 aa16.12■□□□□ 0.17
CDK9-205ENST00000498339 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
CDK9-205ENST00000498339 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
CDK9-205ENST00000498339 CHRNA5P30532 468 aa16.11■□□□□ 0.17
CDK9-205ENST00000498339 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
CDK9-205ENST00000498339 POLR3GLQ9BT43 218 aa16.11■□□□□ 0.17
CDK9-205ENST00000498339 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
CDK9-205ENST00000498339 KDM6AO15550 1401 aaPredicted RBP16.11■□□□□ 0.17
CDK9-205ENST00000498339 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
CDK9-205ENST00000498339 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
CDK9-205ENST00000498339 FKBP8Q14318 412 aa16.1■□□□□ 0.17
CDK9-205ENST00000498339 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
CDK9-205ENST00000498339 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
CDK9-205ENST00000498339 DLEC1Q9Y238 1755 aa16.1■□□□□ 0.17
CDK9-205ENST00000498339 SCN11AQ9UI33 1791 aa16.09■□□□□ 0.17
CDK9-205ENST00000498339 RASSF7Q02833 373 aa16.09■□□□□ 0.17
CDK9-205ENST00000498339 DDR1Q08345 913 aa16.09■□□□□ 0.17
CDK9-205ENST00000498339 C1orf141Q5JVX7 400 aa16.09■□□□□ 0.17
CDK9-205ENST00000498339 MTHFSP49914 203 aa16.07■□□□□ 0.16
CDK9-205ENST00000498339 PRELPP51888 382 aa16.07■□□□□ 0.16
CDK9-205ENST00000498339 ADAMTS7Q9UKP4 1686 aa16.06■□□□□ 0.16
CDK9-205ENST00000498339 ZPR1O75312 459 aa16.06■□□□□ 0.16
CDK9-205ENST00000498339 HSPA1AP0DMV8 641 aaKnown RBP16.06■□□□□ 0.16
CDK9-205ENST00000498339 HSPA1BP0DMV9 641 aaKnown RBP16.06■□□□□ 0.16
CDK9-205ENST00000498339 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
CDK9-205ENST00000498339 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
CDK9-205ENST00000498339 POLRMTO00411 1230 aaKnown RBP16.05■□□□□ 0.16
CDK9-205ENST00000498339 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
CDK9-205ENST00000498339 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
CDK9-205ENST00000498339 NRXN2Q9P2S2 1712 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms