RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
NUDCD3-211ENST00000497978 MSL1Q68DK7 614 aa16.04■□□□□ 0.16
NUDCD3-211ENST00000497978 C4BP0C0L5 1744 aa16.04■□□□□ 0.16
NUDCD3-211ENST00000497978 ASAP1Q9ULH1 1129 aa16.03■□□□□ 0.16
NUDCD3-211ENST00000497978 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.16
NUDCD3-211ENST00000497978 ATP6V1AP38606 617 aa16.02■□□□□ 0.16
NUDCD3-211ENST00000497978 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
NUDCD3-211ENST00000497978 DCAF5Q96JK2 942 aa16.02■□□□□ 0.16
NUDCD3-211ENST00000497978 CHD4Q14839 1912 aa16.02■□□□□ 0.15
NUDCD3-211ENST00000497978 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
NUDCD3-211ENST00000497978 PHF14O94880 888 aa16.01■□□□□ 0.15
NUDCD3-211ENST00000497978 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
NUDCD3-211ENST00000497978 SSFA2P28290 1259 aa16■□□□□ 0.15
NUDCD3-211ENST00000497978 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
NUDCD3-211ENST00000497978 LINC00116Q8NCU8 138 aa16■□□□□ 0.15
NUDCD3-211ENST00000497978 NLGN2Q8NFZ4 835 aa16■□□□□ 0.15
NUDCD3-211ENST00000497978 ATG3Q9NT62 314 aa16■□□□□ 0.15
NUDCD3-211ENST00000497978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.99■□□□□ 0.15
NUDCD3-211ENST00000497978 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
NUDCD3-211ENST00000497978 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
NUDCD3-211ENST00000497978 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
NUDCD3-211ENST00000497978 GNPATO15228 680 aa15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 MTHFSP49914 203 aa15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 CABP4P57796 275 aa15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 ITPK1Q13572 414 aa15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 ZNF784Q8NCA9 323 aaPredicted RBP15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 CD2APQ9Y5K6 639 aa15.98■□□□□ 0.15
NUDCD3-211ENST00000497978 IL13P35225 146 aa15.97■□□□□ 0.15
NUDCD3-211ENST00000497978 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
NUDCD3-211ENST00000497978 GRIN3BO60391 1043 aa15.96■□□□□ 0.15
NUDCD3-211ENST00000497978 AMIGO3Q86WK7 504 aa15.96■□□□□ 0.15
NUDCD3-211ENST00000497978 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
NUDCD3-211ENST00000497978 KDRP35968 1356 aa15.95■□□□□ 0.14
NUDCD3-211ENST00000497978 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
NUDCD3-211ENST00000497978 RTCBQ9Y3I0 505 aaKnown RBP15.94■□□□□ 0.14
NUDCD3-211ENST00000497978 PER1O15534 1290 aaPredicted RBP15.93■□□□□ 0.14
NUDCD3-211ENST00000497978 CC2D1BQ5T0F9 858 aaKnown RBP15.93■□□□□ 0.14
NUDCD3-211ENST00000497978 TRAPPC3LQ5T215 181 aa15.93■□□□□ 0.14
NUDCD3-211ENST00000497978 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
NUDCD3-211ENST00000497978 YBX3P16989 372 aaKnown RBP eCLIP15.92■□□□□ 0.14
NUDCD3-211ENST00000497978 RC3H1Q5TC82 1133 aaKnown RBP15.92■□□□□ 0.14
NUDCD3-211ENST00000497978 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
NUDCD3-211ENST00000497978 DIAPH1O60610 1272 aaKnown RBP15.91■□□□□ 0.14
NUDCD3-211ENST00000497978 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
NUDCD3-211ENST00000497978 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
NUDCD3-211ENST00000497978 CNTNAP4Q9C0A0 1308 aa15.91■□□□□ 0.14
NUDCD3-211ENST00000497978 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
NUDCD3-211ENST00000497978 HMOX1P09601 288 aa15.9■□□□□ 0.14
NUDCD3-211ENST00000497978 RPS6KA4O75676 772 aa15.89■□□□□ 0.13
NUDCD3-211ENST00000497978 RFC4P35249 363 aa15.89■□□□□ 0.13
NUDCD3-211ENST00000497978 NLGN1Q8N2Q7 840 aa15.89■□□□□ 0.13
NUDCD3-211ENST00000497978 NPC1L1Q9UHC9 1359 aa15.88■□□□□ 0.13
NUDCD3-211ENST00000497978 MMP10P09238 476 aa15.88■□□□□ 0.13
NUDCD3-211ENST00000497978 ARHGEF1Q92888 912 aaKnown RBP15.88■□□□□ 0.13
NUDCD3-211ENST00000497978 COL5A3P25940 1745 aaPredicted RBP15.88■□□□□ 0.13
NUDCD3-211ENST00000497978 SCN11AQ9UI33 1791 aa15.87■□□□□ 0.13
NUDCD3-211ENST00000497978 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
NUDCD3-211ENST00000497978 SLC52A2Q9HAB3 445 aa15.87■□□□□ 0.13
NUDCD3-211ENST00000497978 CRKLP46109 303 aaKnown RBP15.86■□□□□ 0.13
NUDCD3-211ENST00000497978 RNMTO43148 476 aaKnown RBP15.85■□□□□ 0.13
NUDCD3-211ENST00000497978 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
NUDCD3-211ENST00000497978 UTRNP46939 3433 aa15.85■□□□□ 0.13
NUDCD3-211ENST00000497978 GYS1P13807 737 aa15.84■□□□□ 0.13
NUDCD3-211ENST00000497978 MTHFSDQ2M296 383 aaKnown RBP15.84■□□□□ 0.13
NUDCD3-211ENST00000497978 PARP3Q9Y6F1 533 aa15.84■□□□□ 0.13
NUDCD3-211ENST00000497978 U2SURPO15042 1029 aaKnown RBP15.83■□□□□ 0.12
NUDCD3-211ENST00000497978 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.12
NUDCD3-211ENST00000497978 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
NUDCD3-211ENST00000497978 MYH14Q7Z406 1995 aaKnown RBP15.83■□□□□ 0.12
NUDCD3-211ENST00000497978 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.12
NUDCD3-211ENST00000497978 C1QTNF8P60827 252 aa15.82■□□□□ 0.12
NUDCD3-211ENST00000497978 TGFB2P61812 414 aa15.82■□□□□ 0.12
NUDCD3-211ENST00000497978 WWC3Q9ULE0 1092 aa15.82■□□□□ 0.12
NUDCD3-211ENST00000497978 MRC1P22897 1456 aa15.81■□□□□ 0.12
NUDCD3-211ENST00000497978 TJP1Q07157 1748 aa15.81■□□□□ 0.12
NUDCD3-211ENST00000497978 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
NUDCD3-211ENST00000497978 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 C1QBPQ07021 282 aaKnown RBP15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 SLC39A6Q13433 755 aa15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 INTS5Q6P9B9 1019 aaKnown RBP15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 DNAJC10Q8IXB1 793 aa15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 KIF13BQ9NQT8 1826 aa15.8■□□□□ 0.12
NUDCD3-211ENST00000497978 COL3A1P02461 1466 aaPredicted RBP15.79■□□□□ 0.12
NUDCD3-211ENST00000497978 USP42Q9H9J4 1324 aaKnown RBP15.79■□□□□ 0.12
NUDCD3-211ENST00000497978 ZPR1O75312 459 aa15.79■□□□□ 0.12
NUDCD3-211ENST00000497978 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
NUDCD3-211ENST00000497978 SRP68Q9UHB9 627 aaKnown RBP15.79■□□□□ 0.12
NUDCD3-211ENST00000497978 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
NUDCD3-211ENST00000497978 C10orf71Q711Q0 1435 aa15.78■□□□□ 0.12
NUDCD3-211ENST00000497978 A0A0G2JLW4 131 aa15.78■□□□□ 0.12
NUDCD3-211ENST00000497978 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
NUDCD3-211ENST00000497978 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
NUDCD3-211ENST00000497978 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
NUDCD3-211ENST00000497978 ATP10DQ9P241 1426 aa15.77■□□□□ 0.12
NUDCD3-211ENST00000497978 ADAMTS7Q9UKP4 1686 aa15.77■□□□□ 0.12
NUDCD3-211ENST00000497978 CYP19A1P11511 503 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms