RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
COMMD6-212ENST00000497707 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
COMMD6-212ENST00000497707 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
COMMD6-212ENST00000497707 ELL2O00472 640 aaPredicted RBP14.22□□□□□ -0.13
COMMD6-212ENST00000497707 NKX1-1Q15270 411 aaPredicted RBP14.22□□□□□ -0.13
COMMD6-212ENST00000497707 SSH1Q8WYL5 1049 aa14.22□□□□□ -0.13
COMMD6-212ENST00000497707 SPATA31A5Q5VU36 1347 aa14.21□□□□□ -0.13
COMMD6-212ENST00000497707 SPATA31A7Q8IWB4 1347 aa14.21□□□□□ -0.13
COMMD6-212ENST00000497707 UNC5CLQ8IV45 518 aa14.21□□□□□ -0.13
COMMD6-212ENST00000497707 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.13
COMMD6-212ENST00000497707 KDM3BQ7LBC6 1761 aa14.21□□□□□ -0.13
COMMD6-212ENST00000497707 WNK3Q9BYP7 1800 aa14.2□□□□□ -0.14
COMMD6-212ENST00000497707 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
COMMD6-212ENST00000497707 C8orf37Q96NL8 207 aa14.2□□□□□ -0.14
COMMD6-212ENST00000497707 TNNQ9UQP3 1299 aa14.2□□□□□ -0.14
COMMD6-212ENST00000497707 BRPF1P55201 1214 aaPredicted RBP14.19□□□□□ -0.14
COMMD6-212ENST00000497707 TWISTNBQ3B726 338 aaPredicted RBP14.19□□□□□ -0.14
COMMD6-212ENST00000497707 MRPL50Q8N5N7 158 aaKnown RBP14.19□□□□□ -0.14
COMMD6-212ENST00000497707 BCL2L13Q9BXK5 485 aa14.19□□□□□ -0.14
COMMD6-212ENST00000497707 NEFLP07196 543 aa14.18□□□□□ -0.14
COMMD6-212ENST00000497707 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
COMMD6-212ENST00000497707 VPS72Q15906 364 aa14.18□□□□□ -0.14
COMMD6-212ENST00000497707 ALDH1L2Q3SY69 923 aa14.18□□□□□ -0.14
COMMD6-212ENST00000497707 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
COMMD6-212ENST00000497707 SLC52A2Q9HAB3 445 aa14.18□□□□□ -0.14
COMMD6-212ENST00000497707 THRAP3Q9Y2W1 955 aaKnown RBP14.18□□□□□ -0.14
COMMD6-212ENST00000497707 TCERG1O14776 1098 aaKnown RBP14.17□□□□□ -0.14
COMMD6-212ENST00000497707 NFATC2IPQ8NCF5 419 aa14.17□□□□□ -0.14
COMMD6-212ENST00000497707 EXOC6Q8TAG9 804 aa14.17□□□□□ -0.14
COMMD6-212ENST00000497707 DDX54Q8TDD1 881 aaKnown RBP14.17□□□□□ -0.14
COMMD6-212ENST00000497707 HEG1Q9ULI3 1381 aa14.17□□□□□ -0.14
COMMD6-212ENST00000497707 PCDH11XQ9BZA7 1347 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 PCDH11YQ9BZA8 1340 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 BTBD11A6QL63 1104 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 TEFQ10587 303 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 ZNF428Q96B54 188 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 CRBNQ96SW2 442 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 MRC1P22897 1456 aa14.16□□□□□ -0.14
COMMD6-212ENST00000497707 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
COMMD6-212ENST00000497707 RLBP1P12271 317 aa14.15□□□□□ -0.14
COMMD6-212ENST00000497707 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
COMMD6-212ENST00000497707 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.15□□□□□ -0.14
COMMD6-212ENST00000497707 TOGARAM1Q9Y4F4 1720 aa14.15□□□□□ -0.14
COMMD6-212ENST00000497707 ERVV-2B6SEH9 535 aa14.14□□□□□ -0.15
COMMD6-212ENST00000497707 EXOC5O00471 708 aa14.14□□□□□ -0.15
COMMD6-212ENST00000497707 SLC39A6Q13433 755 aa14.14□□□□□ -0.15
COMMD6-212ENST00000497707 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
COMMD6-212ENST00000497707 USP21Q9UK80 565 aa14.14□□□□□ -0.15
COMMD6-212ENST00000497707 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
COMMD6-212ENST00000497707 PANK1Q8TE04 598 aa14.13□□□□□ -0.15
COMMD6-212ENST00000497707 CDCA7Q9BWT1 371 aaPredicted RBP14.13□□□□□ -0.15
COMMD6-212ENST00000497707 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
COMMD6-212ENST00000497707 AFF2P51816 1311 aa14.13□□□□□ -0.15
COMMD6-212ENST00000497707 PRAMEF22A3QJZ6 481 aa14.12□□□□□ -0.15
COMMD6-212ENST00000497707 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.12□□□□□ -0.15
COMMD6-212ENST00000497707 MARCH10Q8NA82 808 aaPredicted RBP14.12□□□□□ -0.15
COMMD6-212ENST00000497707 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
COMMD6-212ENST00000497707 ITGB4P16144 1822 aa14.11□□□□□ -0.15
COMMD6-212ENST00000497707 GIGYF1O75420 1035 aaPredicted RBP14.11□□□□□ -0.15
COMMD6-212ENST00000497707 CABP4P57796 275 aa14.11□□□□□ -0.15
COMMD6-212ENST00000497707 ZKSCAN2Q63HK3 967 aa14.11□□□□□ -0.15
COMMD6-212ENST00000497707 ZNF790Q6PG37 636 aa14.11□□□□□ -0.15
COMMD6-212ENST00000497707 G2E3Q7L622 706 aa14.11□□□□□ -0.15
COMMD6-212ENST00000497707 CCDC9Q9Y3X0 531 aaKnown RBP14.11□□□□□ -0.15
COMMD6-212ENST00000497707 GLI3P10071 1580 aa14.1□□□□□ -0.15
COMMD6-212ENST00000497707 ATRNO75882 1429 aa14.1□□□□□ -0.15
COMMD6-212ENST00000497707 TNS2Q63HR2 1409 aa14.1□□□□□ -0.15
COMMD6-212ENST00000497707 TRIM27P14373 513 aa14.1□□□□□ -0.15
COMMD6-212ENST00000497707 FAM98CQ17RN3 349 aaKnown RBP14.1□□□□□ -0.15
COMMD6-212ENST00000497707 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
COMMD6-212ENST00000497707 SOS1Q07889 1333 aaPredicted RBP14.1□□□□□ -0.15
COMMD6-212ENST00000497707 ONECUT3O60422 494 aaPredicted RBP14.09□□□□□ -0.15
COMMD6-212ENST00000497707 DDB1Q16531 1140 aa14.09□□□□□ -0.15
COMMD6-212ENST00000497707 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
COMMD6-212ENST00000497707 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
COMMD6-212ENST00000497707 PIGBQ92521 554 aa14.09□□□□□ -0.15
COMMD6-212ENST00000497707 ARHGAP45Q92619 1136 aa14.09□□□□□ -0.15
COMMD6-212ENST00000497707 ZNF496Q96IT1 587 aaPredicted RBP14.09□□□□□ -0.15
COMMD6-212ENST00000497707 HOXB7P09629 217 aa14.08□□□□□ -0.16
COMMD6-212ENST00000497707 NECTIN2Q92692 538 aa14.08□□□□□ -0.16
COMMD6-212ENST00000497707 CLUAP1Q96AJ1 413 aa14.08□□□□□ -0.16
COMMD6-212ENST00000497707 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
COMMD6-212ENST00000497707 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
COMMD6-212ENST00000497707 CACNA1FO60840 1977 aa14.08□□□□□ -0.16
COMMD6-212ENST00000497707 PAPPAQ13219 1627 aa14.08□□□□□ -0.16
COMMD6-212ENST00000497707 C5P01031 1676 aa14.07□□□□□ -0.16
COMMD6-212ENST00000497707 UBR2Q8IWV8 1755 aa14.07□□□□□ -0.16
COMMD6-212ENST00000497707 DZIP1LQ8IYY4 767 aaKnown RBP14.07□□□□□ -0.16
COMMD6-212ENST00000497707 THSD7AQ9UPZ6 1657 aa14.07□□□□□ -0.16
COMMD6-212ENST00000497707 RGS12O14924 1447 aa14.07□□□□□ -0.16
COMMD6-212ENST00000497707 EIF2S2P20042 333 aaKnown RBP14.06□□□□□ -0.16
COMMD6-212ENST00000497707 PDIA6Q15084 440 aa14.06□□□□□ -0.16
COMMD6-212ENST00000497707 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
COMMD6-212ENST00000497707 QTRT2Q9H974 415 aaKnown RBP14.06□□□□□ -0.16
COMMD6-212ENST00000497707 ATG3Q9NT62 314 aa14.06□□□□□ -0.16
COMMD6-212ENST00000497707 USP16Q9Y5T5 823 aa14.06□□□□□ -0.16
COMMD6-212ENST00000497707 KCPQ6ZWJ8 1503 aa14.05□□□□□ -0.16
COMMD6-212ENST00000497707 IPO8O15397 1037 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms