RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
TCTN3-206ENST00000497399 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
TCTN3-206ENST00000497399 SIPA1L3O60292 1781 aaPredicted RBP12.85□□□□□ -0.35
TCTN3-206ENST00000497399 CYP27B1O15528 508 aa12.85□□□□□ -0.35
TCTN3-206ENST00000497399 KCNQ2O43526 872 aa12.85□□□□□ -0.35
TCTN3-206ENST00000497399 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
TCTN3-206ENST00000497399 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
TCTN3-206ENST00000497399 KAT6BQ8WYB5 2073 aa12.85□□□□□ -0.35
TCTN3-206ENST00000497399 IL16Q14005 1332 aa12.85□□□□□ -0.35
TCTN3-206ENST00000497399 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
TCTN3-206ENST00000497399 CENPBP07199 599 aaPredicted RBP12.84□□□□□ -0.35
TCTN3-206ENST00000497399 PHKG2P15735 406 aa12.84□□□□□ -0.35
TCTN3-206ENST00000497399 PTGER2P43116 358 aa12.84□□□□□ -0.35
TCTN3-206ENST00000497399 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
TCTN3-206ENST00000497399 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
TCTN3-206ENST00000497399 CHD4Q14839 1912 aa12.84□□□□□ -0.35
TCTN3-206ENST00000497399 UTRNP46939 3433 aa12.84□□□□□ -0.35
TCTN3-206ENST00000497399 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
TCTN3-206ENST00000497399 C1orf141Q5JVX7 400 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 DUSP27Q5VZP5 1158 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 RTF1Q92541 710 aaKnown RBP12.83□□□□□ -0.36
TCTN3-206ENST00000497399 LGR6Q9HBX8 967 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 PCDH11XQ9BZA7 1347 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 PCDH11YQ9BZA8 1340 aa12.83□□□□□ -0.36
TCTN3-206ENST00000497399 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
TCTN3-206ENST00000497399 E9PSI1 815 aa12.82□□□□□ -0.36
TCTN3-206ENST00000497399 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
TCTN3-206ENST00000497399 ZNF853P0CG23 659 aa12.82□□□□□ -0.36
TCTN3-206ENST00000497399 SPON1Q9HCB6 807 aa12.82□□□□□ -0.36
TCTN3-206ENST00000497399 LY75O60449 1722 aa12.82□□□□□ -0.36
TCTN3-206ENST00000497399 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
TCTN3-206ENST00000497399 TXNRD1Q16881 649 aa12.81□□□□□ -0.36
TCTN3-206ENST00000497399 SGIP1Q9BQI5 828 aa12.81□□□□□ -0.36
TCTN3-206ENST00000497399 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
TCTN3-206ENST00000497399 MRC1P22897 1456 aa12.8□□□□□ -0.36
TCTN3-206ENST00000497399 EXOC5O00471 708 aa12.8□□□□□ -0.36
TCTN3-206ENST00000497399 GNAI1P63096 354 aa12.8□□□□□ -0.36
TCTN3-206ENST00000497399 CALD1Q05682 793 aaKnown RBP12.8□□□□□ -0.36
TCTN3-206ENST00000497399 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
TCTN3-206ENST00000497399 IFT57Q9NWB7 429 aa12.8□□□□□ -0.36
TCTN3-206ENST00000497399 ITGB4P16144 1822 aa12.8□□□□□ -0.36
TCTN3-206ENST00000497399 CHL1O00533 1208 aa12.79□□□□□ -0.36
TCTN3-206ENST00000497399 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
TCTN3-206ENST00000497399 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
TCTN3-206ENST00000497399 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
TCTN3-206ENST00000497399 FANCIQ9NVI1 1328 aa12.79□□□□□ -0.36
TCTN3-206ENST00000497399 HSP90AB1P08238 724 aaKnown RBP12.78□□□□□ -0.36
TCTN3-206ENST00000497399 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
TCTN3-206ENST00000497399 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
TCTN3-206ENST00000497399 MBIPQ9NS73 344 aa12.78□□□□□ -0.36
TCTN3-206ENST00000497399 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
TCTN3-206ENST00000497399 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
TCTN3-206ENST00000497399 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
TCTN3-206ENST00000497399 ZBTB7AO95365 584 aa12.76□□□□□ -0.37
TCTN3-206ENST00000497399 TEFQ10587 303 aa12.76□□□□□ -0.37
TCTN3-206ENST00000497399 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
TCTN3-206ENST00000497399 LRRC4BQ9NT99 713 aa12.76□□□□□ -0.37
TCTN3-206ENST00000497399 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
TCTN3-206ENST00000497399 YY1P25490 414 aa12.75□□□□□ -0.37
TCTN3-206ENST00000497399 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
TCTN3-206ENST00000497399 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
TCTN3-206ENST00000497399 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
TCTN3-206ENST00000497399 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
TCTN3-206ENST00000497399 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
TCTN3-206ENST00000497399 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
TCTN3-206ENST00000497399 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
TCTN3-206ENST00000497399 TSPYL4Q9UJ04 414 aa12.74□□□□□ -0.37
TCTN3-206ENST00000497399 KCNQ3O43525 872 aa12.73□□□□□ -0.37
TCTN3-206ENST00000497399 ZNF827Q17R98 1081 aa12.73□□□□□ -0.37
TCTN3-206ENST00000497399 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
TCTN3-206ENST00000497399 UBR2Q8IWV8 1755 aa12.73□□□□□ -0.37
TCTN3-206ENST00000497399 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
TCTN3-206ENST00000497399 CABP4P57796 275 aa12.72□□□□□ -0.37
TCTN3-206ENST00000497399 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
TCTN3-206ENST00000497399 C8orf58Q8NAV2 365 aa12.72□□□□□ -0.37
TCTN3-206ENST00000497399 PPP1R1BQ9UD71 204 aaPredicted RBP12.72□□□□□ -0.37
TCTN3-206ENST00000497399 TSPYL6Q8N831 410 aa12.71□□□□□ -0.37
TCTN3-206ENST00000497399 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
TCTN3-206ENST00000497399 FHDC1Q9C0D6 1143 aaPredicted RBP12.71□□□□□ -0.37
TCTN3-206ENST00000497399 VAMP4O75379 141 aa12.7□□□□□ -0.38
TCTN3-206ENST00000497399 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
TCTN3-206ENST00000497399 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
TCTN3-206ENST00000497399 MTFR1LQ9H019 292 aa12.7□□□□□ -0.38
TCTN3-206ENST00000497399 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
TCTN3-206ENST00000497399 RCAN3Q9UKA8 241 aa12.7□□□□□ -0.38
TCTN3-206ENST00000497399 C5P01031 1676 aa12.7□□□□□ -0.38
TCTN3-206ENST00000497399 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
TCTN3-206ENST00000497399 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
TCTN3-206ENST00000497399 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
TCTN3-206ENST00000497399 TWISTNBQ3B726 338 aaPredicted RBP12.69□□□□□ -0.38
TCTN3-206ENST00000497399 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
TCTN3-206ENST00000497399 PIGBQ92521 554 aa12.69□□□□□ -0.38
TCTN3-206ENST00000497399 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
TCTN3-206ENST00000497399 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
TCTN3-206ENST00000497399 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
TCTN3-206ENST00000497399 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms