RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 RNF135Q8IUD6 432 aa9.43□□□□□ -0.9
GGPS1-208ENST00000497327 ETNK1Q9HBU6 452 aa9.43□□□□□ -0.9
GGPS1-208ENST00000497327 IGF1RP08069 1367 aa9.42□□□□□ -0.9
GGPS1-208ENST00000497327 SUPT5HO00267 1087 aaKnown RBP9.42□□□□□ -0.9
GGPS1-208ENST00000497327 ABL2P42684 1182 aa9.42□□□□□ -0.9
GGPS1-208ENST00000497327 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
GGPS1-208ENST00000497327 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
GGPS1-208ENST00000497327 RNF225M0QZC1 329 aaPredicted RBP9.41□□□□□ -0.9
GGPS1-208ENST00000497327 USP4Q13107 963 aa9.41□□□□□ -0.9
GGPS1-208ENST00000497327 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
GGPS1-208ENST00000497327 KCTD17Q8N5Z5 321 aa9.41□□□□□ -0.9
GGPS1-208ENST00000497327 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
GGPS1-208ENST00000497327 PHKA2P46019 1235 aa9.4□□□□□ -0.9
GGPS1-208ENST00000497327 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
GGPS1-208ENST00000497327 C4orf17Q53FE4 359 aa9.4□□□□□ -0.9
GGPS1-208ENST00000497327 OXLD1Q5BKU9 147 aa9.4□□□□□ -0.9
GGPS1-208ENST00000497327 TMEM151AQ8N4L1 468 aa9.4□□□□□ -0.9
GGPS1-208ENST00000497327 GDF11O95390 407 aa9.39□□□□□ -0.91
GGPS1-208ENST00000497327 SCNN1DP51172 638 aa9.39□□□□□ -0.91
GGPS1-208ENST00000497327 ESCO1Q5FWF5 840 aa9.39□□□□□ -0.91
GGPS1-208ENST00000497327 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
GGPS1-208ENST00000497327 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
GGPS1-208ENST00000497327 A0A1B0GTH6 734 aa9.38□□□□□ -0.91
GGPS1-208ENST00000497327 WASHC4Q2M389 1173 aa9.38□□□□□ -0.91
GGPS1-208ENST00000497327 ACDQ96AP0 544 aa9.38□□□□□ -0.91
GGPS1-208ENST00000497327 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
GGPS1-208ENST00000497327 MAP3K10Q02779 954 aa9.37□□□□□ -0.91
GGPS1-208ENST00000497327 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
GGPS1-208ENST00000497327 PPARGC1BQ86YN6 1023 aaKnown RBP9.37□□□□□ -0.91
GGPS1-208ENST00000497327 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
GGPS1-208ENST00000497327 COG6Q9Y2V7 657 aa9.37□□□□□ -0.91
GGPS1-208ENST00000497327 BAZ1AQ9NRL2 1556 aaPredicted RBP9.37□□□□□ -0.91
GGPS1-208ENST00000497327 IRS1P35568 1242 aa9.36□□□□□ -0.91
GGPS1-208ENST00000497327 MARSP56192 900 aaKnown RBP9.36□□□□□ -0.91
GGPS1-208ENST00000497327 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
GGPS1-208ENST00000497327 RHBDD1Q8TEB9 315 aa9.36□□□□□ -0.91
GGPS1-208ENST00000497327 CFHR5Q9BXR6 569 aa9.36□□□□□ -0.91
GGPS1-208ENST00000497327 BCRP11274 1271 aa9.35□□□□□ -0.91
GGPS1-208ENST00000497327 MX2P20592 715 aa9.35□□□□□ -0.91
GGPS1-208ENST00000497327 MSX1P28360 303 aa9.35□□□□□ -0.91
GGPS1-208ENST00000497327 TLR1Q15399 786 aa9.35□□□□□ -0.91
GGPS1-208ENST00000497327 MAP7D1Q3KQU3 841 aa9.35□□□□□ -0.91
GGPS1-208ENST00000497327 SIRT1Q96EB6 747 aa9.35□□□□□ -0.91
GGPS1-208ENST00000497327 PIK3CDO00329 1044 aa9.34□□□□□ -0.91
GGPS1-208ENST00000497327 INHAP05111 366 aa9.34□□□□□ -0.91
GGPS1-208ENST00000497327 SOX11P35716 441 aa9.34□□□□□ -0.91
GGPS1-208ENST00000497327 GDF10P55107 478 aa9.34□□□□□ -0.91
GGPS1-208ENST00000497327 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
GGPS1-208ENST00000497327 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
GGPS1-208ENST00000497327 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
GGPS1-208ENST00000497327 LBRQ14739 615 aaKnown RBP9.33□□□□□ -0.92
GGPS1-208ENST00000497327 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
GGPS1-208ENST00000497327 ZNF295-AS1Q8N0V1 137 aa9.33□□□□□ -0.92
GGPS1-208ENST00000497327 SMARCA4P51532 1647 aa9.32□□□□□ -0.92
GGPS1-208ENST00000497327 GTF2E1P29083 439 aaPredicted RBP9.32□□□□□ -0.92
GGPS1-208ENST00000497327 ENAMQ9NRM1 1142 aa9.32□□□□□ -0.92
GGPS1-208ENST00000497327 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
GGPS1-208ENST00000497327 TMEM229AB2RXF0 380 aa9.31□□□□□ -0.92
GGPS1-208ENST00000497327 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
GGPS1-208ENST00000497327 CRISPLD1Q9H336 500 aa9.31□□□□□ -0.92
GGPS1-208ENST00000497327 NDFIP2Q9NV92 336 aa9.31□□□□□ -0.92
GGPS1-208ENST00000497327 DNMT3AQ9Y6K1 912 aaPredicted RBP9.31□□□□□ -0.92
GGPS1-208ENST00000497327 OIP5O43482 229 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 ATP4AP20648 1035 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 MAP2K3P46734 347 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 PLA2G4AP47712 749 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 SMTNP53814 917 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 ALG2Q9H553 416 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 DNAAF2Q9NVR5 837 aaKnown RBP9.3□□□□□ -0.92
GGPS1-208ENST00000497327 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
GGPS1-208ENST00000497327 PCDHGA11Q9Y5H2 935 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 CNTNAP5Q8WYK1 1306 aa9.3□□□□□ -0.92
GGPS1-208ENST00000497327 C1orf229Q6ZS94 237 aaPredicted RBP9.29□□□□□ -0.92
GGPS1-208ENST00000497327 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
GGPS1-208ENST00000497327 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
GGPS1-208ENST00000497327 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
GGPS1-208ENST00000497327 IQSEC3Q9UPP2 1182 aaPredicted RBP9.29□□□□□ -0.92
GGPS1-208ENST00000497327 USP3Q9Y6I4 520 aa9.29□□□□□ -0.92
GGPS1-208ENST00000497327 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
GGPS1-208ENST00000497327 PGBD3Q8N328 593 aa9.28□□□□□ -0.92
GGPS1-208ENST00000497327 ATXN7L1Q9ULK2 861 aaPredicted RBP9.28□□□□□ -0.92
GGPS1-208ENST00000497327 PHF24Q9UPV7 400 aa9.28□□□□□ -0.92
GGPS1-208ENST00000497327 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 C2CD2LO14523 706 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 BNIP3LO60238 219 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 MTFR1Q15390 333 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 TBC1D9Q6ZT07 1266 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 NEDD1Q8NHV4 660 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 ABHD17AQ96GS6 310 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 SERTAD1Q9UHV2 236 aa9.27□□□□□ -0.93
GGPS1-208ENST00000497327 NIFKQ9BYG3 293 aaKnown RBP9.26□□□□□ -0.93
GGPS1-208ENST00000497327 HCN2Q9UL51 889 aa9.26□□□□□ -0.93
GGPS1-208ENST00000497327 PEG3Q9GZU2 1588 aa9.25□□□□□ -0.93
GGPS1-208ENST00000497327 SKIP12755 728 aa9.25□□□□□ -0.93
GGPS1-208ENST00000497327 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
GGPS1-208ENST00000497327 C1orf216Q8TAB5 229 aa9.25□□□□□ -0.93
GGPS1-208ENST00000497327 WIZO95785 1651 aa9.25□□□□□ -0.93
GGPS1-208ENST00000497327 A6NJY4 79 aa9.24□□□□□ -0.93
GGPS1-208ENST00000497327 CDK2AP1O14519 115 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms