RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
CTPS1-211ENST00000497210 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
CTPS1-211ENST00000497210 IRF6O14896 467 aa13.08□□□□□ -0.32
CTPS1-211ENST00000497210 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
CTPS1-211ENST00000497210 NLRP13Q86W25 1043 aa13.08□□□□□ -0.32
CTPS1-211ENST00000497210 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
CTPS1-211ENST00000497210 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
CTPS1-211ENST00000497210 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
CTPS1-211ENST00000497210 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
CTPS1-211ENST00000497210 PIP4K2BP78356 416 aa13.07□□□□□ -0.32
CTPS1-211ENST00000497210 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
CTPS1-211ENST00000497210 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
CTPS1-211ENST00000497210 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
CTPS1-211ENST00000497210 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
CTPS1-211ENST00000497210 CDK12Q9NYV4 1490 aaPredicted RBP13.06□□□□□ -0.32
CTPS1-211ENST00000497210 CCER2I3L3R5 266 aa13.06□□□□□ -0.32
CTPS1-211ENST00000497210 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
CTPS1-211ENST00000497210 ADAM33Q9BZ11 813 aa13.06□□□□□ -0.32
CTPS1-211ENST00000497210 ABCC6O95255 1503 aa13.06□□□□□ -0.32
CTPS1-211ENST00000497210 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
CTPS1-211ENST00000497210 NFAT5O94916 1531 aa13.05□□□□□ -0.32
CTPS1-211ENST00000497210 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
CTPS1-211ENST00000497210 C6orf132Q5T0Z8 1188 aa13.05□□□□□ -0.32
CTPS1-211ENST00000497210 USP19O94966 1318 aa13.05□□□□□ -0.32
CTPS1-211ENST00000497210 RTL1A6NKG5 1358 aa13.05□□□□□ -0.32
CTPS1-211ENST00000497210 LTN1O94822 1766 aa13.04□□□□□ -0.32
CTPS1-211ENST00000497210 PDE4DQ08499 809 aa13.04□□□□□ -0.32
CTPS1-211ENST00000497210 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
CTPS1-211ENST00000497210 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
CTPS1-211ENST00000497210 DDX17Q92841 729 aaKnown RBP13.03□□□□□ -0.32
CTPS1-211ENST00000497210 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
CTPS1-211ENST00000497210 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
CTPS1-211ENST00000497210 PPP2R1AP30153 589 aa13.02□□□□□ -0.33
CTPS1-211ENST00000497210 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
CTPS1-211ENST00000497210 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.33
CTPS1-211ENST00000497210 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
CTPS1-211ENST00000497210 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
CTPS1-211ENST00000497210 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
CTPS1-211ENST00000497210 FLT4P35916 1363 aa13.01□□□□□ -0.33
CTPS1-211ENST00000497210 PNPLA6Q8IY17 1366 aa13□□□□□ -0.33
CTPS1-211ENST00000497210 AMHR2Q16671 573 aa13□□□□□ -0.33
CTPS1-211ENST00000497210 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
CTPS1-211ENST00000497210 JCADQ9P266 1359 aa12.99□□□□□ -0.33
CTPS1-211ENST00000497210 FAM208AQ9UK61 1670 aaKnown RBP12.99□□□□□ -0.33
CTPS1-211ENST00000497210 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
CTPS1-211ENST00000497210 BCL2L12Q9HB09 334 aa12.98□□□□□ -0.33
CTPS1-211ENST00000497210 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
CTPS1-211ENST00000497210 CPDO75976 1380 aa12.97□□□□□ -0.33
CTPS1-211ENST00000497210 GCP02774 474 aa12.97□□□□□ -0.33
CTPS1-211ENST00000497210 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
CTPS1-211ENST00000497210 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
CTPS1-211ENST00000497210 AMPHP49418 695 aa12.96□□□□□ -0.33
CTPS1-211ENST00000497210 MTHFSP49914 203 aa12.96□□□□□ -0.33
CTPS1-211ENST00000497210 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.33
CTPS1-211ENST00000497210 COL14A1Q05707 1796 aaKnown RBP12.96□□□□□ -0.34
CTPS1-211ENST00000497210 INSRP06213 1382 aa12.95□□□□□ -0.34
CTPS1-211ENST00000497210 MAP3K19Q56UN5 1328 aa12.95□□□□□ -0.34
CTPS1-211ENST00000497210 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
CTPS1-211ENST00000497210 RRS1Q15050 365 aaKnown RBP12.95□□□□□ -0.34
CTPS1-211ENST00000497210 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTPS1-211ENST00000497210 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
CTPS1-211ENST00000497210 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
CTPS1-211ENST00000497210 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
CTPS1-211ENST00000497210 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
CTPS1-211ENST00000497210 EMILIN1Q9Y6C2 1016 aa12.94□□□□□ -0.34
CTPS1-211ENST00000497210 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
CTPS1-211ENST00000497210 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
CTPS1-211ENST00000497210 PARP9Q8IXQ6 854 aa12.93□□□□□ -0.34
CTPS1-211ENST00000497210 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
CTPS1-211ENST00000497210 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
CTPS1-211ENST00000497210 DIAPH1O60610 1272 aaKnown RBP12.92□□□□□ -0.34
CTPS1-211ENST00000497210 COL9A1P20849 921 aa12.92□□□□□ -0.34
CTPS1-211ENST00000497210 LCE2DQ5TA82 110 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-211ENST00000497210 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
CTPS1-211ENST00000497210 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
CTPS1-211ENST00000497210 PLCH1Q4KWH8 1693 aa12.92□□□□□ -0.34
CTPS1-211ENST00000497210 NWD2Q9ULI1 1742 aa12.91□□□□□ -0.34
CTPS1-211ENST00000497210 HOXC9P31274 260 aa12.91□□□□□ -0.34
CTPS1-211ENST00000497210 RGPD1P0DJD0 1748 aa12.91□□□□□ -0.34
CTPS1-211ENST00000497210 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 COL18A1P39060 1754 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 PPP1R3GB7ZBB8 358 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 PTPREP23469 700 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 HSPA1LP34931 641 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 PRSS12P56730 875 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 ZC3H6P61129 1189 aaKnown RBP12.9□□□□□ -0.34
CTPS1-211ENST00000497210 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 IP6K1Q92551 441 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
CTPS1-211ENST00000497210 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
CTPS1-211ENST00000497210 PHOX2BQ99453 314 aa12.89□□□□□ -0.35
CTPS1-211ENST00000497210 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
CTPS1-211ENST00000497210 ADGRG1Q9Y653 693 aa12.89□□□□□ -0.35
CTPS1-211ENST00000497210 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
CTPS1-211ENST00000497210 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
CTPS1-211ENST00000497210 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
CTPS1-211ENST00000497210 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
CTPS1-211ENST00000497210 ST18O60284 1047 aa12.87□□□□□ -0.35
CTPS1-211ENST00000497210 NEFMP07197 916 aa12.87□□□□□ -0.35
CTPS1-211ENST00000497210 FBLN1P23142 703 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms