RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 GTF2IP78347 998 aa7.69□□□□□ -1.18
SMC4-225ENST00000497203 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
SMC4-225ENST00000497203 NLRP3Q96P20 1036 aa7.69□□□□□ -1.18
SMC4-225ENST00000497203 ESYT1Q9BSJ8 1104 aa7.69□□□□□ -1.18
SMC4-225ENST00000497203 HRH3Q9Y5N1 445 aa7.69□□□□□ -1.18
SMC4-225ENST00000497203 RNF225M0QZC1 329 aaPredicted RBP7.68□□□□□ -1.18
SMC4-225ENST00000497203 PRICKLE2Q7Z3G6 844 aa7.68□□□□□ -1.18
SMC4-225ENST00000497203 XAGE2Q96GT9 111 aa7.68□□□□□ -1.18
SMC4-225ENST00000497203 GPC1P35052 558 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 GDF10P55107 478 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 CLDN10P78369 228 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 KRT76Q01546 638 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 CENPCQ03188 943 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 ESCO1Q5FWF5 840 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 CFAP70Q5T0N1 1121 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 LYSMD3Q7Z3D4 306 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 GRIP2Q9C0E4 1043 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 MKRN1Q9UHC7 482 aaKnown RBP7.67□□□□□ -1.18
SMC4-225ENST00000497203 KIAA1024Q9UPX6 916 aa7.67□□□□□ -1.18
SMC4-225ENST00000497203 TMEM229AB2RXF0 380 aa7.66□□□□□ -1.18
SMC4-225ENST00000497203 INHAP05111 366 aa7.66□□□□□ -1.18
SMC4-225ENST00000497203 RHOQP17081 205 aa7.66□□□□□ -1.18
SMC4-225ENST00000497203 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
SMC4-225ENST00000497203 PTSQ03393 145 aa7.66□□□□□ -1.18
SMC4-225ENST00000497203 PSME1Q06323 249 aa7.66□□□□□ -1.18
SMC4-225ENST00000497203 SLC27A3Q5K4L6 730 aa7.66□□□□□ -1.18
SMC4-225ENST00000497203 GPAT2Q6NUI2 795 aa7.66□□□□□ -1.18
SMC4-225ENST00000497203 FHDC1Q9C0D6 1143 aaPredicted RBP7.66□□□□□ -1.18
SMC4-225ENST00000497203 ZBTB7BO15156 539 aaPredicted RBP7.65□□□□□ -1.18
SMC4-225ENST00000497203 IGHA1P01876 353 aa7.65□□□□□ -1.18
SMC4-225ENST00000497203 TRIM50Q86XT4 487 aa7.65□□□□□ -1.18
SMC4-225ENST00000497203 OGFOD1Q8N543 542 aa7.65□□□□□ -1.18
SMC4-225ENST00000497203 SENP3-EIF4A1A0A087X0R7 540 aa7.64□□□□□ -1.19
SMC4-225ENST00000497203 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
SMC4-225ENST00000497203 POU4F2Q12837 409 aa7.64□□□□□ -1.19
SMC4-225ENST00000497203 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
SMC4-225ENST00000497203 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMC4-225ENST00000497203 C1orf115Q9H7X2 142 aa7.64□□□□□ -1.19
SMC4-225ENST00000497203 DNAAF2Q9NVR5 837 aaKnown RBP7.64□□□□□ -1.19
SMC4-225ENST00000497203 SERTAD1Q9UHV2 236 aa7.64□□□□□ -1.19
SMC4-225ENST00000497203 SLC35F4A4IF30 521 aa7.63□□□□□ -1.19
SMC4-225ENST00000497203 RFX1P22670 979 aa7.63□□□□□ -1.19
SMC4-225ENST00000497203 TLR1Q15399 786 aa7.63□□□□□ -1.19
SMC4-225ENST00000497203 TPCN2Q8NHX9 752 aa7.63□□□□□ -1.19
SMC4-225ENST00000497203 ZNF594Q96JF6 807 aaPredicted RBP7.63□□□□□ -1.19
SMC4-225ENST00000497203 ZSCAN10Q96SZ4 725 aaPredicted RBP7.63□□□□□ -1.19
SMC4-225ENST00000497203 ADAMTS8Q9UP79 889 aa7.63□□□□□ -1.19
SMC4-225ENST00000497203 SPATA31C2B4DYI2 1134 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 RASA1P20936 1047 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 ATP1A2P50993 1020 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 CCDC102BQ68D86 513 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 NBPF10Q6P3W6 841 aaKnown RBP7.62□□□□□ -1.19
SMC4-225ENST00000497203 NBPF15Q8N660 670 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 CCDC155Q8N6L0 562 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 SLC4A9Q96Q91 983 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 ARID3AQ99856 593 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 ZNF358Q9NW07 568 aa7.62□□□□□ -1.19
SMC4-225ENST00000497203 DKK1O94907 266 aa7.61□□□□□ -1.19
SMC4-225ENST00000497203 SMTNP53814 917 aa7.61□□□□□ -1.19
SMC4-225ENST00000497203 CRTC2Q53ET0 693 aaPredicted RBP7.61□□□□□ -1.19
SMC4-225ENST00000497203 LARGE2Q8N3Y3 721 aa7.61□□□□□ -1.19
SMC4-225ENST00000497203 GPR161Q8N6U8 529 aaKnown RBP7.61□□□□□ -1.19
SMC4-225ENST00000497203 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
SMC4-225ENST00000497203 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
SMC4-225ENST00000497203 TMEM214Q6NUQ4 689 aaKnown RBP7.6□□□□□ -1.19
SMC4-225ENST00000497203 TAS1R3Q7RTX0 852 aa7.6□□□□□ -1.19
SMC4-225ENST00000497203 PPARGC1BQ86YN6 1023 aaKnown RBP7.6□□□□□ -1.19
SMC4-225ENST00000497203 SIX5Q8N196 739 aa7.6□□□□□ -1.19
SMC4-225ENST00000497203 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
SMC4-225ENST00000497203 CNTNAP3BQ96NU0 1288 aa7.6□□□□□ -1.19
SMC4-225ENST00000497203 CNTNAP3Q9BZ76 1288 aa7.6□□□□□ -1.19
SMC4-225ENST00000497203 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
SMC4-225ENST00000497203 DNMT3AQ9Y6K1 912 aaPredicted RBP7.6□□□□□ -1.19
SMC4-225ENST00000497203 A6NJY4 79 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 SFI1A8K8P3 1242 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 ADAM23O75077 832 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 PHKA2P46019 1235 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 PTK7Q13308 1070 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 MTFR1Q15390 333 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 C4orf17Q53FE4 359 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 ZNF385CQ66K41 422 aaPredicted RBP7.59□□□□□ -1.19
SMC4-225ENST00000497203 LARP1Q6PKG0 1096 aaKnown RBP7.59□□□□□ -1.19
SMC4-225ENST00000497203 CCDC82Q8N4S0 544 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 SERPINA10Q9UK55 444 aa7.59□□□□□ -1.19
SMC4-225ENST00000497203 IQSEC3Q9UPP2 1182 aaPredicted RBP7.59□□□□□ -1.19
SMC4-225ENST00000497203 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L10C9JJH3 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L12C9JPN9 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L21D6R901 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 BACH1O14867 736 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 EPHA4P54764 986 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 GNASQ5JWF2 1037 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms