RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 KIF13BQ9NQT8 1826 aa13.5□□□□□ -0.25
SCNM1-206ENST00000497147 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
SCNM1-206ENST00000497147 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
SCNM1-206ENST00000497147 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
SCNM1-206ENST00000497147 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
SCNM1-206ENST00000497147 ITPK1Q13572 414 aa13.49□□□□□ -0.25
SCNM1-206ENST00000497147 RAPGEF4Q8WZA2 1011 aa13.49□□□□□ -0.25
SCNM1-206ENST00000497147 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
SCNM1-206ENST00000497147 C10orf71Q711Q0 1435 aa13.48□□□□□ -0.25
SCNM1-206ENST00000497147 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
SCNM1-206ENST00000497147 GNPATO15228 680 aa13.48□□□□□ -0.25
SCNM1-206ENST00000497147 FCHSD2O94868 740 aa13.48□□□□□ -0.25
SCNM1-206ENST00000497147 TATP17735 454 aaPredicted RBP13.48□□□□□ -0.25
SCNM1-206ENST00000497147 KCNA3P22001 575 aa13.48□□□□□ -0.25
SCNM1-206ENST00000497147 SIK1P57059 783 aa13.48□□□□□ -0.25
SCNM1-206ENST00000497147 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
SCNM1-206ENST00000497147 COG3Q96JB2 828 aa13.47□□□□□ -0.25
SCNM1-206ENST00000497147 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
SCNM1-206ENST00000497147 PLEKHG2Q9H7P9 1386 aa13.46□□□□□ -0.25
SCNM1-206ENST00000497147 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
SCNM1-206ENST00000497147 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
SCNM1-206ENST00000497147 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
SCNM1-206ENST00000497147 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
SCNM1-206ENST00000497147 ITGB4P16144 1822 aa13.45□□□□□ -0.26
SCNM1-206ENST00000497147 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
SCNM1-206ENST00000497147 RNF181Q9P0P0 153 aa13.44□□□□□ -0.26
SCNM1-206ENST00000497147 BRCA1P38398 1863 aaKnown RBP13.43□□□□□ -0.26
SCNM1-206ENST00000497147 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
SCNM1-206ENST00000497147 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
SCNM1-206ENST00000497147 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
SCNM1-206ENST00000497147 PKD1L3Q7Z443 1732 aa13.43□□□□□ -0.26
SCNM1-206ENST00000497147 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
SCNM1-206ENST00000497147 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
SCNM1-206ENST00000497147 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
SCNM1-206ENST00000497147 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
SCNM1-206ENST00000497147 GYS1P13807 737 aa13.41□□□□□ -0.26
SCNM1-206ENST00000497147 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
SCNM1-206ENST00000497147 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
SCNM1-206ENST00000497147 PIM2Q9P1W9 311 aa13.41□□□□□ -0.26
SCNM1-206ENST00000497147 C4AP0C0L4 1744 aa13.41□□□□□ -0.26
SCNM1-206ENST00000497147 TNRC6CQ9HCJ0 1690 aaKnown RBP13.4□□□□□ -0.26
SCNM1-206ENST00000497147 SMG6Q86US8 1419 aaKnown RBP13.4□□□□□ -0.26
SCNM1-206ENST00000497147 DALRD3Q5D0E6 543 aaKnown RBP13.4□□□□□ -0.26
SCNM1-206ENST00000497147 SLC4A9Q96Q91 983 aa13.4□□□□□ -0.26
SCNM1-206ENST00000497147 INSRP06213 1382 aa13.4□□□□□ -0.26
SCNM1-206ENST00000497147 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
SCNM1-206ENST00000497147 PANK3Q9H999 370 aa13.39□□□□□ -0.27
SCNM1-206ENST00000497147 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
SCNM1-206ENST00000497147 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
SCNM1-206ENST00000497147 RTCBQ9Y3I0 505 aaKnown RBP13.39□□□□□ -0.27
SCNM1-206ENST00000497147 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
SCNM1-206ENST00000497147 FYB1O15117 783 aa13.38□□□□□ -0.27
SCNM1-206ENST00000497147 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
SCNM1-206ENST00000497147 KDRP35968 1356 aa13.37□□□□□ -0.27
SCNM1-206ENST00000497147 ZNF316A6NFI3 1004 aaPredicted RBP13.37□□□□□ -0.27
SCNM1-206ENST00000497147 CHRNA5P30532 468 aa13.37□□□□□ -0.27
SCNM1-206ENST00000497147 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
SCNM1-206ENST00000497147 ADRA2BP18089 450 aa13.36□□□□□ -0.27
SCNM1-206ENST00000497147 RASSF7Q02833 373 aa13.36□□□□□ -0.27
SCNM1-206ENST00000497147 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
SCNM1-206ENST00000497147 SBF1O95248 1867 aa13.36□□□□□ -0.27
SCNM1-206ENST00000497147 FLT4P35916 1363 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 GLTPD2A6NH11 291 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 POTECB2RU33 542 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 RFC4P35249 363 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 DDR1Q08345 913 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
SCNM1-206ENST00000497147 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 NCAPD2Q15021 1401 aa13.35□□□□□ -0.27
SCNM1-206ENST00000497147 FOXN1O15353 648 aa13.34□□□□□ -0.27
SCNM1-206ENST00000497147 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
SCNM1-206ENST00000497147 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
SCNM1-206ENST00000497147 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
SCNM1-206ENST00000497147 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
SCNM1-206ENST00000497147 ZC3H4Q9UPT8 1303 aaKnown RBP13.34□□□□□ -0.27
SCNM1-206ENST00000497147 PHKG2P15735 406 aa13.33□□□□□ -0.28
SCNM1-206ENST00000497147 FKBP8Q14318 412 aa13.33□□□□□ -0.28
SCNM1-206ENST00000497147 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
SCNM1-206ENST00000497147 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
SCNM1-206ENST00000497147 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
SCNM1-206ENST00000497147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCNM1-206ENST00000497147 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
SCNM1-206ENST00000497147 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
SCNM1-206ENST00000497147 LMNB1P20700 586 aa13.31□□□□□ -0.28
SCNM1-206ENST00000497147 PRDM10Q9NQV6 1147 aa13.31□□□□□ -0.28
SCNM1-206ENST00000497147 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
SCNM1-206ENST00000497147 POLRMTO00411 1230 aaKnown RBP13.3□□□□□ -0.28
SCNM1-206ENST00000497147 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
SCNM1-206ENST00000497147 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
SCNM1-206ENST00000497147 IFNL2Q8IZJ0 200 aa13.3□□□□□ -0.28
SCNM1-206ENST00000497147 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
SCNM1-206ENST00000497147 ZNF831Q5JPB2 1677 aa13.29□□□□□ -0.28
SCNM1-206ENST00000497147 TM4SF1P30408 202 aa13.29□□□□□ -0.28
SCNM1-206ENST00000497147 EYA1Q99502 592 aa13.29□□□□□ -0.28
SCNM1-206ENST00000497147 ANKRD26Q9UPS8 1709 aa13.29□□□□□ -0.28
SCNM1-206ENST00000497147 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
SCNM1-206ENST00000497147 MYH14Q7Z406 1995 aaKnown RBP13.29□□□□□ -0.28
SCNM1-206ENST00000497147 NFKBIEO00221 500 aa13.27□□□□□ -0.29
SCNM1-206ENST00000497147 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms