RNA–Protein interactions for RNA: ENST00000496983.1

DHFR2-205, Transcript of dihydrofolate reductase 2, humanhuman

TSL 4

Gene DHFR2, Length 591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-205ENST00000496983 NLRP13Q86W25 1043 aa11.22□□□□□ -0.61
DHFR2-205ENST00000496983 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
DHFR2-205ENST00000496983 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
DHFR2-205ENST00000496983 EVA1CP58658 441 aa11.21□□□□□ -0.61
DHFR2-205ENST00000496983 LARP1Q6PKG0 1096 aaKnown RBP11.21□□□□□ -0.61
DHFR2-205ENST00000496983 DEFB132Q7Z7B7 95 aa11.21□□□□□ -0.61
DHFR2-205ENST00000496983 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.61
DHFR2-205ENST00000496983 CAMTA1Q9Y6Y1 1673 aa11.2□□□□□ -0.62
DHFR2-205ENST00000496983 TTC21BQ7Z4L5 1316 aa11.2□□□□□ -0.62
DHFR2-205ENST00000496983 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
DHFR2-205ENST00000496983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.62
DHFR2-205ENST00000496983 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
DHFR2-205ENST00000496983 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
DHFR2-205ENST00000496983 KTN1Q86UP2 1357 aaKnown RBP11.19□□□□□ -0.62
DHFR2-205ENST00000496983 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
DHFR2-205ENST00000496983 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
DHFR2-205ENST00000496983 SLC4A5Q9BY07 1137 aa11.19□□□□□ -0.62
DHFR2-205ENST00000496983 SLC12A5Q9H2X9 1139 aa11.19□□□□□ -0.62
DHFR2-205ENST00000496983 PRKRIP1Q9H875 184 aaPredicted RBP11.19□□□□□ -0.62
DHFR2-205ENST00000496983 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
DHFR2-205ENST00000496983 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
DHFR2-205ENST00000496983 SLIT3O75094 1523 aa11.18□□□□□ -0.62
DHFR2-205ENST00000496983 BLMP54132 1417 aaPredicted RBP11.18□□□□□ -0.62
DHFR2-205ENST00000496983 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 CPDO75976 1380 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
DHFR2-205ENST00000496983 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
DHFR2-205ENST00000496983 TMF1P82094 1093 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 SF3B2Q13435 895 aaKnown RBP11.17□□□□□ -0.62
DHFR2-205ENST00000496983 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 MON2Q7Z3U7 1717 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
DHFR2-205ENST00000496983 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
DHFR2-205ENST00000496983 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
DHFR2-205ENST00000496983 DPYSL4O14531 572 aa11.16□□□□□ -0.62
DHFR2-205ENST00000496983 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
DHFR2-205ENST00000496983 NME9Q86XW9 330 aa11.16□□□□□ -0.62
DHFR2-205ENST00000496983 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
DHFR2-205ENST00000496983 COL5A2P05997 1499 aaPredicted RBP11.16□□□□□ -0.62
DHFR2-205ENST00000496983 MYOM1P52179 1685 aa11.16□□□□□ -0.62
DHFR2-205ENST00000496983 RGPD5Q99666 1765 aa11.16□□□□□ -0.62
DHFR2-205ENST00000496983 POLR3GLQ9BT43 218 aa11.15□□□□□ -0.62
DHFR2-205ENST00000496983 A0A1W2PP64 1363 aa11.15□□□□□ -0.63
DHFR2-205ENST00000496983 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
DHFR2-205ENST00000496983 TOM1L2Q6ZVM7 507 aa11.14□□□□□ -0.63
DHFR2-205ENST00000496983 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
DHFR2-205ENST00000496983 CCDC125Q86Z20 511 aa11.14□□□□□ -0.63
DHFR2-205ENST00000496983 TCP11L2Q8N4U5 519 aa11.14□□□□□ -0.63
DHFR2-205ENST00000496983 COL18A1P39060 1754 aa11.13□□□□□ -0.63
DHFR2-205ENST00000496983 CSB-PGBD3P0DP91 1061 aa11.13□□□□□ -0.63
DHFR2-205ENST00000496983 PTPREP23469 700 aa11.13□□□□□ -0.63
DHFR2-205ENST00000496983 EN1Q05925 392 aaPredicted RBP11.13□□□□□ -0.63
DHFR2-205ENST00000496983 CRB1P82279 1406 aa11.12□□□□□ -0.63
DHFR2-205ENST00000496983 TRIM37O94972 964 aa11.12□□□□□ -0.63
DHFR2-205ENST00000496983 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
DHFR2-205ENST00000496983 ARHGEF25Q86VW2 580 aa11.12□□□□□ -0.63
DHFR2-205ENST00000496983 KCNH5Q8NCM2 988 aa11.12□□□□□ -0.63
DHFR2-205ENST00000496983 NFAT5O94916 1531 aa11.12□□□□□ -0.63
DHFR2-205ENST00000496983 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
DHFR2-205ENST00000496983 COL9A1P20849 921 aa11.11□□□□□ -0.63
DHFR2-205ENST00000496983 BAG6P46379 1132 aa11.11□□□□□ -0.63
DHFR2-205ENST00000496983 BARGINQ6ZT62 677 aa11.11□□□□□ -0.63
DHFR2-205ENST00000496983 PANK3Q9H999 370 aa11.11□□□□□ -0.63
DHFR2-205ENST00000496983 RGPD1P0DJD0 1748 aa11.11□□□□□ -0.63
DHFR2-205ENST00000496983 SRCAPQ6ZRS2 3230 aa11.11□□□□□ -0.63
DHFR2-205ENST00000496983 LTN1O94822 1766 aa11.11□□□□□ -0.63
DHFR2-205ENST00000496983 EDC4Q6P2E9 1401 aaKnown RBP11.1□□□□□ -0.63
DHFR2-205ENST00000496983 TNS1Q9HBL0 1735 aaKnown RBP11.1□□□□□ -0.63
DHFR2-205ENST00000496983 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
DHFR2-205ENST00000496983 PHF14O94880 888 aa11.1□□□□□ -0.63
DHFR2-205ENST00000496983 CENPBP07199 599 aaPredicted RBP11.1□□□□□ -0.63
DHFR2-205ENST00000496983 FBLN1P23142 703 aa11.1□□□□□ -0.63
DHFR2-205ENST00000496983 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
DHFR2-205ENST00000496983 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
DHFR2-205ENST00000496983 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
DHFR2-205ENST00000496983 USP31Q70CQ4 1352 aa11.09□□□□□ -0.63
DHFR2-205ENST00000496983 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
DHFR2-205ENST00000496983 EZH2Q15910 746 aaKnown RBP11.09□□□□□ -0.63
DHFR2-205ENST00000496983 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
DHFR2-205ENST00000496983 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
DHFR2-205ENST00000496983 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
DHFR2-205ENST00000496983 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
DHFR2-205ENST00000496983 WNK3Q9BYP7 1800 aa11.08□□□□□ -0.64
DHFR2-205ENST00000496983 PDIA6Q15084 440 aa11.08□□□□□ -0.64
DHFR2-205ENST00000496983 FAM196AQ6ZSG2 479 aa11.08□□□□□ -0.64
DHFR2-205ENST00000496983 PUS7Q96PZ0 661 aaKnown RBP11.08□□□□□ -0.64
DHFR2-205ENST00000496983 THRAP3Q9Y2W1 955 aaKnown RBP11.08□□□□□ -0.64
DHFR2-205ENST00000496983 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
DHFR2-205ENST00000496983 APBA3O96018 575 aa11.07□□□□□ -0.64
DHFR2-205ENST00000496983 DDB1Q16531 1140 aa11.07□□□□□ -0.64
DHFR2-205ENST00000496983 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
DHFR2-205ENST00000496983 LTV1Q96GA3 475 aaPredicted RBP11.07□□□□□ -0.64
DHFR2-205ENST00000496983 OVOS2A0A0J9YW53 1432 aa11.07□□□□□ -0.64
DHFR2-205ENST00000496983 OVOS2Q6IE36 1432 aa11.07□□□□□ -0.64
DHFR2-205ENST00000496983 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
DHFR2-205ENST00000496983 RALBP1Q15311 655 aa11.06□□□□□ -0.64
DHFR2-205ENST00000496983 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
DHFR2-205ENST00000496983 CARD14Q9BXL6 1004 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms