RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 SIK1P57059 783 aa11.32□□□□□ -0.6
SF1-219ENST00000496969 AKAP4Q5JQC9 854 aa11.32□□□□□ -0.6
SF1-219ENST00000496969 ARXQ96QS3 562 aa11.32□□□□□ -0.6
SF1-219ENST00000496969 COL5A3P25940 1745 aaPredicted RBP11.32□□□□□ -0.6
SF1-219ENST00000496969 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
SF1-219ENST00000496969 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
SF1-219ENST00000496969 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
SF1-219ENST00000496969 PHF14O94880 888 aa11.3□□□□□ -0.6
SF1-219ENST00000496969 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
SF1-219ENST00000496969 RBM42Q9BTD8 480 aaKnown RBP11.3□□□□□ -0.6
SF1-219ENST00000496969 ATG3Q9NT62 314 aa11.3□□□□□ -0.6
SF1-219ENST00000496969 MRC1P22897 1456 aa11.3□□□□□ -0.6
SF1-219ENST00000496969 CICQ96RK0 1608 aaPredicted RBP11.29□□□□□ -0.6
SF1-219ENST00000496969 COL23A1Q86Y22 540 aaPredicted RBP11.29□□□□□ -0.6
SF1-219ENST00000496969 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
SF1-219ENST00000496969 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
SF1-219ENST00000496969 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
SF1-219ENST00000496969 ADAMTS7Q9UKP4 1686 aa11.29□□□□□ -0.6
SF1-219ENST00000496969 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
SF1-219ENST00000496969 GNPATO15228 680 aa11.28□□□□□ -0.6
SF1-219ENST00000496969 SSFA2P28290 1259 aa11.28□□□□□ -0.6
SF1-219ENST00000496969 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
SF1-219ENST00000496969 GAS2L2Q8NHY3 880 aa11.28□□□□□ -0.6
SF1-219ENST00000496969 TJP1Q07157 1748 aa11.28□□□□□ -0.6
SF1-219ENST00000496969 ITPK1Q13572 414 aa11.27□□□□□ -0.61
SF1-219ENST00000496969 MTHFSDQ2M296 383 aaKnown RBP11.27□□□□□ -0.61
SF1-219ENST00000496969 SYT17Q9BSW7 474 aa11.27□□□□□ -0.61
SF1-219ENST00000496969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
SF1-219ENST00000496969 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
SF1-219ENST00000496969 MSL1Q68DK7 614 aa11.26□□□□□ -0.61
SF1-219ENST00000496969 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
SF1-219ENST00000496969 SLC52A2Q9HAB3 445 aa11.26□□□□□ -0.61
SF1-219ENST00000496969 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
SF1-219ENST00000496969 CNTNAP4Q9C0A0 1308 aa11.26□□□□□ -0.61
SF1-219ENST00000496969 PTCD1O75127 700 aaKnown RBP11.25□□□□□ -0.61
SF1-219ENST00000496969 NEFMP07197 916 aa11.25□□□□□ -0.61
SF1-219ENST00000496969 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
SF1-219ENST00000496969 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
SF1-219ENST00000496969 C4AP0C0L4 1744 aa11.25□□□□□ -0.61
SF1-219ENST00000496969 UBR2Q8IWV8 1755 aa11.24□□□□□ -0.61
SF1-219ENST00000496969 GNAT3A8MTJ3 354 aa11.24□□□□□ -0.61
SF1-219ENST00000496969 PRKAR2BP31323 418 aa11.24□□□□□ -0.61
SF1-219ENST00000496969 TEFQ10587 303 aa11.24□□□□□ -0.61
SF1-219ENST00000496969 TTC5Q8N0Z6 440 aa11.24□□□□□ -0.61
SF1-219ENST00000496969 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
SF1-219ENST00000496969 ADRA2BP18089 450 aa11.23□□□□□ -0.61
SF1-219ENST00000496969 TRAPPC3LQ5T215 181 aa11.23□□□□□ -0.61
SF1-219ENST00000496969 RC3H1Q5TC82 1133 aaKnown RBP11.23□□□□□ -0.61
SF1-219ENST00000496969 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
SF1-219ENST00000496969 LGR6Q9HBX8 967 aa11.23□□□□□ -0.61
SF1-219ENST00000496969 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
SF1-219ENST00000496969 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
SF1-219ENST00000496969 SLC4A9Q96Q91 983 aa11.22□□□□□ -0.61
SF1-219ENST00000496969 RPS6KA4O75676 772 aa11.21□□□□□ -0.61
SF1-219ENST00000496969 FCHSD2O94868 740 aa11.21□□□□□ -0.61
SF1-219ENST00000496969 YY1P25490 414 aa11.21□□□□□ -0.61
SF1-219ENST00000496969 RFC4P35249 363 aa11.21□□□□□ -0.61
SF1-219ENST00000496969 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
SF1-219ENST00000496969 GPR162Q16538 588 aa11.21□□□□□ -0.61
SF1-219ENST00000496969 AMIGO3Q86WK7 504 aa11.21□□□□□ -0.61
SF1-219ENST00000496969 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
SF1-219ENST00000496969 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
SF1-219ENST00000496969 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
SF1-219ENST00000496969 RALBP1Q15311 655 aa11.2□□□□□ -0.62
SF1-219ENST00000496969 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
SF1-219ENST00000496969 PNNQ9H307 717 aaKnown RBP11.2□□□□□ -0.62
SF1-219ENST00000496969 CD2APQ9Y5K6 639 aa11.2□□□□□ -0.62
SF1-219ENST00000496969 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
SF1-219ENST00000496969 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
SF1-219ENST00000496969 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
SF1-219ENST00000496969 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
SF1-219ENST00000496969 NLGN1Q8N2Q7 840 aa11.19□□□□□ -0.62
SF1-219ENST00000496969 NLGN2Q8NFZ4 835 aa11.19□□□□□ -0.62
SF1-219ENST00000496969 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
SF1-219ENST00000496969 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
SF1-219ENST00000496969 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
SF1-219ENST00000496969 CHD4Q14839 1912 aa11.18□□□□□ -0.62
SF1-219ENST00000496969 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
SF1-219ENST00000496969 DLG5Q8TDM6 1919 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 CEMIPQ8WUJ3 1361 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 STARD3NLO95772 234 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 MMP10P09238 476 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 IL17REQ8NFR9 667 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
SF1-219ENST00000496969 COL15A1P39059 1388 aa11.16□□□□□ -0.62
SF1-219ENST00000496969 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
SF1-219ENST00000496969 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
SF1-219ENST00000496969 MYBBP1AQ9BQG0 1328 aaKnown RBP11.16□□□□□ -0.62
SF1-219ENST00000496969 USP42Q9H9J4 1324 aaKnown RBP11.16□□□□□ -0.62
SF1-219ENST00000496969 HTATSF1O43719 755 aaKnown RBP11.16□□□□□ -0.62
SF1-219ENST00000496969 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
SF1-219ENST00000496969 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
SF1-219ENST00000496969 TEX13AQ9BXU3 409 aaPredicted RBP11.16□□□□□ -0.62
SF1-219ENST00000496969 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
SF1-219ENST00000496969 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
SF1-219ENST00000496969 SCN7AQ01118 1682 aa11.15□□□□□ -0.62
SF1-219ENST00000496969 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
SF1-219ENST00000496969 ZPR1O75312 459 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms