RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 NLRP3Q96P20 1036 aa9.1□□□□□ -0.95
TRIM4-205ENST00000496896 MEN1O00255 615 aa9.09□□□□□ -0.95
TRIM4-205ENST00000496896 OXLD1Q5BKU9 147 aa9.09□□□□□ -0.95
TRIM4-205ENST00000496896 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
TRIM4-205ENST00000496896 PODNQ7Z5L7 613 aa9.09□□□□□ -0.95
TRIM4-205ENST00000496896 ESYT1Q9BSJ8 1104 aa9.09□□□□□ -0.95
TRIM4-205ENST00000496896 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
TRIM4-205ENST00000496896 HRH3Q9Y5N1 445 aa9.09□□□□□ -0.95
TRIM4-205ENST00000496896 CNTNAP5Q8WYK1 1306 aa9.08□□□□□ -0.96
TRIM4-205ENST00000496896 K7ELQ4 463 aaPredicted RBP9.08□□□□□ -0.96
TRIM4-205ENST00000496896 PIK3CDO00329 1044 aa9.08□□□□□ -0.96
TRIM4-205ENST00000496896 WDR44Q5JSH3 913 aa9.08□□□□□ -0.96
TRIM4-205ENST00000496896 HDGFL1Q5TGJ6 251 aa9.08□□□□□ -0.96
TRIM4-205ENST00000496896 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
TRIM4-205ENST00000496896 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
TRIM4-205ENST00000496896 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
TRIM4-205ENST00000496896 SENP3-EIF4A1A0A087X0R7 540 aa9.07□□□□□ -0.96
TRIM4-205ENST00000496896 SPATA31C2B4DYI2 1134 aa9.07□□□□□ -0.96
TRIM4-205ENST00000496896 WASLO00401 505 aaPredicted RBP9.07□□□□□ -0.96
TRIM4-205ENST00000496896 GAS6Q14393 721 aa9.07□□□□□ -0.96
TRIM4-205ENST00000496896 CNKSR1Q969H4 720 aa9.07□□□□□ -0.96
TRIM4-205ENST00000496896 PSMG3-AS1Q96PY0 264 aa9.07□□□□□ -0.96
TRIM4-205ENST00000496896 IL2RAP01589 272 aa9.06□□□□□ -0.96
TRIM4-205ENST00000496896 SKIP12755 728 aa9.06□□□□□ -0.96
TRIM4-205ENST00000496896 EML3Q32P44 896 aa9.06□□□□□ -0.96
TRIM4-205ENST00000496896 PLEKHM2Q8IWE5 1019 aa9.06□□□□□ -0.96
TRIM4-205ENST00000496896 SLC27A3Q5K4L6 730 aa9.05□□□□□ -0.96
TRIM4-205ENST00000496896 Q8N3U1 123 aa9.05□□□□□ -0.96
TRIM4-205ENST00000496896 UCN2Q96RP3 112 aa9.05□□□□□ -0.96
TRIM4-205ENST00000496896 USP17L5A8MUK1 530 aa9.04□□□□□ -0.96
TRIM4-205ENST00000496896 NEDD1Q8NHV4 660 aa9.04□□□□□ -0.96
TRIM4-205ENST00000496896 GLMNQ92990 594 aa9.04□□□□□ -0.96
TRIM4-205ENST00000496896 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
TRIM4-205ENST00000496896 RAB6BQ9NRW1 208 aa9.04□□□□□ -0.96
TRIM4-205ENST00000496896 NOD1Q9Y239 953 aa9.04□□□□□ -0.96
TRIM4-205ENST00000496896 ATP9BO43861 1147 aa9.03□□□□□ -0.96
TRIM4-205ENST00000496896 SCNN1DP51172 638 aa9.03□□□□□ -0.96
TRIM4-205ENST00000496896 CENPCQ03188 943 aa9.03□□□□□ -0.96
TRIM4-205ENST00000496896 PRICKLE2Q7Z3G6 844 aa9.03□□□□□ -0.96
TRIM4-205ENST00000496896 FHDC1Q9C0D6 1143 aaPredicted RBP9.03□□□□□ -0.96
TRIM4-205ENST00000496896 MBIPQ9NS73 344 aa9.03□□□□□ -0.96
TRIM4-205ENST00000496896 INHAP05111 366 aa9.02□□□□□ -0.97
TRIM4-205ENST00000496896 NCOA4Q13772 614 aa9.02□□□□□ -0.97
TRIM4-205ENST00000496896 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
TRIM4-205ENST00000496896 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.01□□□□□ -0.97
TRIM4-205ENST00000496896 BCRP11274 1271 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 GDF10P55107 478 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 NBPF10Q6P3W6 841 aaKnown RBP9.01□□□□□ -0.97
TRIM4-205ENST00000496896 TAS1R3Q7RTX0 852 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 TRIM50Q86XT4 487 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 NBPF15Q8N660 670 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 GMCL1Q96IK5 515 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 ZSCAN10Q96SZ4 725 aaPredicted RBP9.01□□□□□ -0.97
TRIM4-205ENST00000496896 KRTAP9-2Q9BYQ4 174 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 CUEDC1Q9NWM3 386 aaPredicted RBP9.01□□□□□ -0.97
TRIM4-205ENST00000496896 DYRK1BQ9Y463 629 aa9.01□□□□□ -0.97
TRIM4-205ENST00000496896 TBC1D9Q6ZT07 1266 aa9□□□□□ -0.97
TRIM4-205ENST00000496896 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
TRIM4-205ENST00000496896 IGF1RP08069 1367 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 USP17L3A6NCW0 530 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 USP17L4A6NCW7 530 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
TRIM4-205ENST00000496896 BAG6P46379 1132 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 GTF2IP78347 998 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 POU4F2Q12837 409 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 USP17L2Q6R6M4 530 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 USP17L1Q7RTZ2 530 aa8.99□□□□□ -0.97
TRIM4-205ENST00000496896 PPARGC1BQ86YN6 1023 aaKnown RBP8.99□□□□□ -0.97
TRIM4-205ENST00000496896 TMEM229AB2RXF0 380 aa8.98□□□□□ -0.97
TRIM4-205ENST00000496896 RHOQP17081 205 aa8.98□□□□□ -0.97
TRIM4-205ENST00000496896 GNASQ5JWF2 1037 aa8.98□□□□□ -0.97
TRIM4-205ENST00000496896 CALR3Q96L12 384 aaKnown RBP8.98□□□□□ -0.97
TRIM4-205ENST00000496896 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
TRIM4-205ENST00000496896 SMTNP53814 917 aa8.97□□□□□ -0.97
TRIM4-205ENST00000496896 TLR1Q15399 786 aa8.97□□□□□ -0.97
TRIM4-205ENST00000496896 FOXR1Q6PIV2 292 aa8.97□□□□□ -0.97
TRIM4-205ENST00000496896 RHBDD1Q8TEB9 315 aa8.97□□□□□ -0.97
TRIM4-205ENST00000496896 GTF3C3Q9Y5Q9 886 aa8.97□□□□□ -0.97
TRIM4-205ENST00000496896 KRTAP9-6A0A140TA67 174 aa8.96□□□□□ -0.98
TRIM4-205ENST00000496896 BACH1O14867 736 aa8.96□□□□□ -0.98
TRIM4-205ENST00000496896 MTFR1Q15390 333 aa8.96□□□□□ -0.98
TRIM4-205ENST00000496896 TMEM214Q6NUQ4 689 aaKnown RBP8.96□□□□□ -0.98
TRIM4-205ENST00000496896 TRIM22Q8IYM9 498 aa8.96□□□□□ -0.98
TRIM4-205ENST00000496896 DEPDC4Q8N2C3 294 aa8.96□□□□□ -0.98
TRIM4-205ENST00000496896 ZNF837Q96EG3 531 aaPredicted RBP8.96□□□□□ -0.98
TRIM4-205ENST00000496896 TIMMDC1Q9NPL8 285 aa8.96□□□□□ -0.98
TRIM4-205ENST00000496896 A0A1B0GTH6 734 aa8.95□□□□□ -0.98
TRIM4-205ENST00000496896 H7C1W4 665 aa8.95□□□□□ -0.98
TRIM4-205ENST00000496896 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
TRIM4-205ENST00000496896 PPP1R12CQ9BZL4 782 aa8.95□□□□□ -0.98
TRIM4-205ENST00000496896 TFIP11Q9UBB9 837 aaKnown RBP8.95□□□□□ -0.98
TRIM4-205ENST00000496896 MAFBQ9Y5Q3 323 aaPredicted RBP8.95□□□□□ -0.98
TRIM4-205ENST00000496896 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
TRIM4-205ENST00000496896 GPR25O00155 361 aa8.94□□□□□ -0.98
TRIM4-205ENST00000496896 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
TRIM4-205ENST00000496896 F11P03951 625 aa8.94□□□□□ -0.98
TRIM4-205ENST00000496896 LARGE2Q8N3Y3 721 aa8.94□□□□□ -0.98
TRIM4-205ENST00000496896 ACDQ96AP0 544 aa8.94□□□□□ -0.98
TRIM4-205ENST00000496896 LRRC4BQ9NT99 713 aa8.94□□□□□ -0.98
TRIM4-205ENST00000496896 A6NJY4 79 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms