RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 DIAPH1O60610 1272 aaKnown RBP26.44■■□□□ 1.82
COL20A1-208ENST00000496810 ARXQ96QS3 562 aa26.43■■□□□ 1.82
COL20A1-208ENST00000496810 TJP1Q07157 1748 aa26.42■■□□□ 1.82
COL20A1-208ENST00000496810 ERVV-2B6SEH9 535 aa26.42■■□□□ 1.82
COL20A1-208ENST00000496810 HSP90AB1P08238 724 aaKnown RBP26.42■■□□□ 1.82
COL20A1-208ENST00000496810 C1orf141Q5JVX7 400 aa26.42■■□□□ 1.82
COL20A1-208ENST00000496810 SLC16A10Q8TF71 515 aa26.42■■□□□ 1.82
COL20A1-208ENST00000496810 SLC4A9Q96Q91 983 aa26.42■■□□□ 1.82
COL20A1-208ENST00000496810 MSL1Q68DK7 614 aa26.41■■□□□ 1.82
COL20A1-208ENST00000496810 SYT17Q9BSW7 474 aa26.41■■□□□ 1.82
COL20A1-208ENST00000496810 MRC1P22897 1456 aa26.41■■□□□ 1.82
COL20A1-208ENST00000496810 MYH14Q7Z406 1995 aaKnown RBP26.4■■□□□ 1.82
COL20A1-208ENST00000496810 MSH5O43196 834 aa26.4■■□□□ 1.82
COL20A1-208ENST00000496810 AK7Q96M32 723 aa26.39■■□□□ 1.82
COL20A1-208ENST00000496810 PHF14O94880 888 aa26.38■■□□□ 1.81
COL20A1-208ENST00000496810 ATP6V1AP38606 617 aa26.38■■□□□ 1.81
COL20A1-208ENST00000496810 CABP4P57796 275 aa26.38■■□□□ 1.81
COL20A1-208ENST00000496810 CICQ96RK0 1608 aaPredicted RBP26.38■■□□□ 1.81
COL20A1-208ENST00000496810 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
COL20A1-208ENST00000496810 C4AP0C0L4 1744 aa26.36■■□□□ 1.81
COL20A1-208ENST00000496810 MTHFSDQ2M296 383 aaKnown RBP26.36■■□□□ 1.81
COL20A1-208ENST00000496810 U2SURPO15042 1029 aaKnown RBP26.35■■□□□ 1.81
COL20A1-208ENST00000496810 NFATC2IPQ8NCF5 419 aa26.35■■□□□ 1.81
COL20A1-208ENST00000496810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.34■■□□□ 1.81
COL20A1-208ENST00000496810 POLD1P28340 1107 aa26.34■■□□□ 1.81
COL20A1-208ENST00000496810 PPP2R1AP30153 589 aa26.34■■□□□ 1.81
COL20A1-208ENST00000496810 AKAP4Q5JQC9 854 aa26.34■■□□□ 1.81
COL20A1-208ENST00000496810 KLHL34Q8N239 644 aa26.34■■□□□ 1.81
COL20A1-208ENST00000496810 RBM42Q9BTD8 480 aaKnown RBP26.34■■□□□ 1.81
COL20A1-208ENST00000496810 LGR6Q9HBX8 967 aa26.34■■□□□ 1.81
COL20A1-208ENST00000496810 GNPATO15228 680 aa26.33■■□□□ 1.81
COL20A1-208ENST00000496810 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.8
COL20A1-208ENST00000496810 UBR2Q8IWV8 1755 aa26.32■■□□□ 1.8
COL20A1-208ENST00000496810 KCPQ6ZWJ8 1503 aa26.3■■□□□ 1.8
COL20A1-208ENST00000496810 PTCD1O75127 700 aaKnown RBP26.3■■□□□ 1.8
COL20A1-208ENST00000496810 NLGN2Q8NFZ4 835 aa26.3■■□□□ 1.8
COL20A1-208ENST00000496810 RNMTO43148 476 aaKnown RBP26.29■■□□□ 1.8
COL20A1-208ENST00000496810 SSFA2P28290 1259 aa26.29■■□□□ 1.8
COL20A1-208ENST00000496810 FLAD1Q8NFF5 587 aa26.29■■□□□ 1.8
COL20A1-208ENST00000496810 SLC52A2Q9HAB3 445 aa26.28■■□□□ 1.8
COL20A1-208ENST00000496810 CNTNAP4Q9C0A0 1308 aa26.25■■□□□ 1.79
COL20A1-208ENST00000496810 RSPH6AQ9H0K4 717 aa26.25■■□□□ 1.79
COL20A1-208ENST00000496810 CHD4Q14839 1912 aa26.24■■□□□ 1.79
COL20A1-208ENST00000496810 HMGB2P26583 209 aaKnown RBP26.24■■□□□ 1.79
COL20A1-208ENST00000496810 SLC39A6Q13433 755 aa26.24■■□□□ 1.79
COL20A1-208ENST00000496810 CFAP53Q96M91 514 aa26.24■■□□□ 1.79
COL20A1-208ENST00000496810 PRKAR2BP31323 418 aa26.23■■□□□ 1.79
COL20A1-208ENST00000496810 PHACTR3Q96KR7 559 aa26.23■■□□□ 1.79
COL20A1-208ENST00000496810 DCAF8L1A6NGE4 600 aa26.2■■□□□ 1.78
COL20A1-208ENST00000496810 RTCBQ9Y3I0 505 aaKnown RBP26.2■■□□□ 1.78
COL20A1-208ENST00000496810 YY1P25490 414 aa26.19■■□□□ 1.78
COL20A1-208ENST00000496810 CRKLP46109 303 aaKnown RBP26.19■■□□□ 1.78
COL20A1-208ENST00000496810 RC3H1Q5TC82 1133 aaKnown RBP26.19■■□□□ 1.78
COL20A1-208ENST00000496810 IL17REQ8NFR9 667 aa26.19■■□□□ 1.78
COL20A1-208ENST00000496810 KIAA1551Q9HCM1 1747 aa26.19■■□□□ 1.78
COL20A1-208ENST00000496810 DLG5Q8TDM6 1919 aa26.18■■□□□ 1.78
COL20A1-208ENST00000496810 U2AF1L5P0DN76 240 aaPredicted RBP26.18■■□□□ 1.78
COL20A1-208ENST00000496810 U2AF1Q01081 240 aaKnown RBP eCLIP26.18■■□□□ 1.78
COL20A1-208ENST00000496810 DNAJC10Q8IXB1 793 aa26.18■■□□□ 1.78
COL20A1-208ENST00000496810 GAS2L2Q8NHY3 880 aa26.18■■□□□ 1.78
COL20A1-208ENST00000496810 KIF13BQ9NQT8 1826 aa26.17■■□□□ 1.78
COL20A1-208ENST00000496810 GNAT3A8MTJ3 354 aa26.16■■□□□ 1.78
COL20A1-208ENST00000496810 RPS6KA4O75676 772 aa26.16■■□□□ 1.78
COL20A1-208ENST00000496810 ARHGEF1Q92888 912 aaKnown RBP26.16■■□□□ 1.78
COL20A1-208ENST00000496810 TRAPPC3LQ5T215 181 aa26.15■■□□□ 1.78
COL20A1-208ENST00000496810 INTS5Q6P9B9 1019 aaKnown RBP26.15■■□□□ 1.78
COL20A1-208ENST00000496810 CEMIPQ8WUJ3 1361 aa26.15■■□□□ 1.78
COL20A1-208ENST00000496810 PELP1Q8IZL8 1130 aaKnown RBP26.14■■□□□ 1.78
COL20A1-208ENST00000496810 NUDCQ9Y266 331 aa26.14■■□□□ 1.78
COL20A1-208ENST00000496810 YBX3P16989 372 aaKnown RBP eCLIP26.13■■□□□ 1.77
COL20A1-208ENST00000496810 N4BP2Q86UW6 1770 aaPredicted RBP26.12■■□□□ 1.77
COL20A1-208ENST00000496810 MMP10P09238 476 aa26.12■■□□□ 1.77
COL20A1-208ENST00000496810 ADRA2BP18089 450 aa26.12■■□□□ 1.77
COL20A1-208ENST00000496810 GPR162Q16538 588 aa26.12■■□□□ 1.77
COL20A1-208ENST00000496810 SRP68Q9UHB9 627 aaKnown RBP26.12■■□□□ 1.77
COL20A1-208ENST00000496810 GYS1P13807 737 aa26.11■■□□□ 1.77
COL20A1-208ENST00000496810 DDX10Q13206 875 aaKnown RBP26.11■■□□□ 1.77
COL20A1-208ENST00000496810 CD2APQ9Y5K6 639 aa26.11■■□□□ 1.77
COL20A1-208ENST00000496810 CYP19A1P11511 503 aaPredicted RBP26.1■■□□□ 1.77
COL20A1-208ENST00000496810 RFC4P35249 363 aa26.09■■□□□ 1.77
COL20A1-208ENST00000496810 TEFQ10587 303 aa26.09■■□□□ 1.77
COL20A1-208ENST00000496810 CCDC87Q9NVE4 849 aa26.09■■□□□ 1.77
COL20A1-208ENST00000496810 FCHSD2O94868 740 aa26.08■■□□□ 1.77
COL20A1-208ENST00000496810 ZNF496Q96IT1 587 aaPredicted RBP26.08■■□□□ 1.77
COL20A1-208ENST00000496810 WWC3Q9ULE0 1092 aa26.08■■□□□ 1.77
COL20A1-208ENST00000496810 ZBTB1Q9Y2K1 713 aa26.08■■□□□ 1.77
COL20A1-208ENST00000496810 SOS1Q07889 1333 aaPredicted RBP26.08■■□□□ 1.77
COL20A1-208ENST00000496810 USP42Q9H9J4 1324 aaKnown RBP26.08■■□□□ 1.77
COL20A1-208ENST00000496810 C10orf71Q711Q0 1435 aa26.07■■□□□ 1.76
COL20A1-208ENST00000496810 KCNQ3O43525 872 aa26.06■■□□□ 1.76
COL20A1-208ENST00000496810 DCTN1Q14203 1278 aa26.06■■□□□ 1.76
COL20A1-208ENST00000496810 ZNF790Q6PG37 636 aa26.06■■□□□ 1.76
COL20A1-208ENST00000496810 MCM10Q7L590 875 aa26.06■■□□□ 1.76
COL20A1-208ENST00000496810 BRCA1P38398 1863 aaKnown RBP26.06■■□□□ 1.76
COL20A1-208ENST00000496810 PXDNLA1KZ92 1463 aa26.05■■□□□ 1.76
COL20A1-208ENST00000496810 FKBP8Q14318 412 aa26.05■■□□□ 1.76
COL20A1-208ENST00000496810 TTC5Q8N0Z6 440 aa26.05■■□□□ 1.76
COL20A1-208ENST00000496810 COL15A1P39059 1388 aa26.05■■□□□ 1.76
COL20A1-208ENST00000496810 HEG1Q9ULI3 1381 aa26.05■■□□□ 1.76
COL20A1-208ENST00000496810 SCN7AQ01118 1682 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms