RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 CABP4P57796 275 aa16.83■□□□□ 0.28
VPS72-206ENST00000496809 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.28
VPS72-206ENST00000496809 ZNF784Q8NCA9 323 aaPredicted RBP16.83■□□□□ 0.28
VPS72-206ENST00000496809 GNPATO15228 680 aa16.82■□□□□ 0.28
VPS72-206ENST00000496809 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
VPS72-206ENST00000496809 LINC00116Q8NCU8 138 aa16.82■□□□□ 0.28
VPS72-206ENST00000496809 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
VPS72-206ENST00000496809 IL13P35225 146 aa16.81■□□□□ 0.28
VPS72-206ENST00000496809 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
VPS72-206ENST00000496809 KDRP35968 1356 aa16.8■□□□□ 0.28
VPS72-206ENST00000496809 ITPK1Q13572 414 aa16.8■□□□□ 0.28
VPS72-206ENST00000496809 RTCBQ9Y3I0 505 aaKnown RBP16.8■□□□□ 0.28
VPS72-206ENST00000496809 CHD4Q14839 1912 aa16.8■□□□□ 0.28
VPS72-206ENST00000496809 TRAPPC3LQ5T215 181 aa16.79■□□□□ 0.28
VPS72-206ENST00000496809 RC3H1Q5TC82 1133 aaKnown RBP16.79■□□□□ 0.28
VPS72-206ENST00000496809 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
VPS72-206ENST00000496809 PER1O15534 1290 aaPredicted RBP16.78■□□□□ 0.28
VPS72-206ENST00000496809 ADRA2BP18089 450 aa16.78■□□□□ 0.28
VPS72-206ENST00000496809 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
VPS72-206ENST00000496809 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
VPS72-206ENST00000496809 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
VPS72-206ENST00000496809 ZNF831Q5JPB2 1677 aa16.77■□□□□ 0.28
VPS72-206ENST00000496809 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
VPS72-206ENST00000496809 AKAP4Q5JQC9 854 aa16.76■□□□□ 0.27
VPS72-206ENST00000496809 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
VPS72-206ENST00000496809 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
VPS72-206ENST00000496809 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
VPS72-206ENST00000496809 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
VPS72-206ENST00000496809 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
VPS72-206ENST00000496809 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
VPS72-206ENST00000496809 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
VPS72-206ENST00000496809 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■□□□ 11.4
VPS72-206ENST00000496809 RFC4P35249 363 aa16.74■□□□□ 0.27
VPS72-206ENST00000496809 SMIM5Q71RC9 77 aa16.74■□□□□ 0.27
VPS72-206ENST00000496809 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
VPS72-206ENST00000496809 MMP10P09238 476 aa16.72■□□□□ 0.27
VPS72-206ENST00000496809 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
VPS72-206ENST00000496809 HMOX1P09601 288 aa16.71■□□□□ 0.27
VPS72-206ENST00000496809 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
VPS72-206ENST00000496809 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
VPS72-206ENST00000496809 TGFB2P61812 414 aa16.69■□□□□ 0.26
VPS72-206ENST00000496809 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
VPS72-206ENST00000496809 RNMTO43148 476 aaKnown RBP16.68■□□□□ 0.26
VPS72-206ENST00000496809 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
VPS72-206ENST00000496809 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
VPS72-206ENST00000496809 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
VPS72-206ENST00000496809 GYS1P13807 737 aa16.67■□□□□ 0.26
VPS72-206ENST00000496809 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
VPS72-206ENST00000496809 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
VPS72-206ENST00000496809 LGR6Q9HBX8 967 aa16.67■□□□□ 0.26
VPS72-206ENST00000496809 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
VPS72-206ENST00000496809 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
VPS72-206ENST00000496809 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
VPS72-206ENST00000496809 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
VPS72-206ENST00000496809 VSIG10Q8N0Z9 540 aa16.65■□□□□ 0.26
VPS72-206ENST00000496809 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
VPS72-206ENST00000496809 CICQ96RK0 1608 aaPredicted RBP16.64■□□□□ 0.25
VPS72-206ENST00000496809 ZPR1O75312 459 aa16.64■□□□□ 0.25
VPS72-206ENST00000496809 MRC1P22897 1456 aa16.64■□□□□ 0.25
VPS72-206ENST00000496809 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
VPS72-206ENST00000496809 TTC5Q8N0Z6 440 aa16.63■□□□□ 0.25
VPS72-206ENST00000496809 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
VPS72-206ENST00000496809 UTRNP46939 3433 aa16.63■□□□□ 0.25
VPS72-206ENST00000496809 USP42Q9H9J4 1324 aaKnown RBP16.63■□□□□ 0.25
VPS72-206ENST00000496809 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
VPS72-206ENST00000496809 TEFQ10587 303 aa16.62■□□□□ 0.25
VPS72-206ENST00000496809 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
VPS72-206ENST00000496809 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
VPS72-206ENST00000496809 CYP19A1P11511 503 aaPredicted RBP16.61■□□□□ 0.25
VPS72-206ENST00000496809 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
VPS72-206ENST00000496809 GPBP1L1Q9HC44 474 aaPredicted RBP16.61■□□□□ 0.25
VPS72-206ENST00000496809 WWC3Q9ULE0 1092 aa16.61■□□□□ 0.25
VPS72-206ENST00000496809 C4AP0C0L4 1744 aa16.61■□□□□ 0.25
VPS72-206ENST00000496809 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
VPS72-206ENST00000496809 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
VPS72-206ENST00000496809 A0A0G2JLW4 131 aa16.6■□□□□ 0.25
VPS72-206ENST00000496809 STARD3NLO95772 234 aa16.6■□□□□ 0.25
VPS72-206ENST00000496809 TEX13AQ9BXU3 409 aaPredicted RBP16.6■□□□□ 0.25
VPS72-206ENST00000496809 SRP68Q9UHB9 627 aaKnown RBP16.6■□□□□ 0.25
VPS72-206ENST00000496809 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
VPS72-206ENST00000496809 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
VPS72-206ENST00000496809 ATP10DQ9P241 1426 aa16.6■□□□□ 0.25
VPS72-206ENST00000496809 TJP1Q07157 1748 aa16.59■□□□□ 0.25
VPS72-206ENST00000496809 KIF13BQ9NQT8 1826 aa16.59■□□□□ 0.25
VPS72-206ENST00000496809 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
VPS72-206ENST00000496809 FKBP8Q14318 412 aa16.59■□□□□ 0.25
VPS72-206ENST00000496809 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
VPS72-206ENST00000496809 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
VPS72-206ENST00000496809 DPEP1P16444 411 aa16.58■□□□□ 0.24
VPS72-206ENST00000496809 NARFQ9UHQ1 456 aa16.58■□□□□ 0.24
VPS72-206ENST00000496809 ADCY9O60503 1353 aa16.57■□□□□ 0.24
VPS72-206ENST00000496809 FCHSD2O94868 740 aa16.57■□□□□ 0.24
VPS72-206ENST00000496809 TM4SF1P30408 202 aa16.57■□□□□ 0.24
VPS72-206ENST00000496809 USPL1Q5W0Q7 1092 aa16.57■□□□□ 0.24
VPS72-206ENST00000496809 IL17REQ8NFR9 667 aa16.57■□□□□ 0.24
VPS72-206ENST00000496809 PIM2Q9P1W9 311 aa16.57■□□□□ 0.24
VPS72-206ENST00000496809 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
VPS72-206ENST00000496809 COL15A1P39059 1388 aa16.56■□□□□ 0.24
VPS72-206ENST00000496809 A0A087WZG4 1122 aa16.56■□□□□ 0.24
VPS72-206ENST00000496809 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms