RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ANKRD36BQ8N2N9 1353 aa8.02□□□□□ -1.13
SSBP1-213ENST00000496622 ABCC11Q96J66 1382 aa8.02□□□□□ -1.13
SSBP1-213ENST00000496622 PRR36Q9H6K5 1346 aa8.02□□□□□ -1.13
SSBP1-213ENST00000496622 KCNA6P17658 529 aa8.01□□□□□ -1.13
SSBP1-213ENST00000496622 NPDC1Q9NQX5 325 aaPredicted RBP8.01□□□□□ -1.13
SSBP1-213ENST00000496622 TERF2IPQ9NYB0 399 aa8.01□□□□□ -1.13
SSBP1-213ENST00000496622 ADAMTS13Q76LX8 1427 aa8.01□□□□□ -1.13
SSBP1-213ENST00000496622 U2SURPO15042 1029 aaKnown RBP8.01□□□□□ -1.13
SSBP1-213ENST00000496622 NCLP19338 710 aaKnown RBP8.01□□□□□ -1.13
SSBP1-213ENST00000496622 ARHGEF28Q8N1W1 1705 aaKnown RBP8.01□□□□□ -1.13
SSBP1-213ENST00000496622 KCNG1Q9UIX4 513 aa8.01□□□□□ -1.13
SSBP1-213ENST00000496622 PSDA5PKW4 1024 aaPredicted RBP8□□□□□ -1.13
SSBP1-213ENST00000496622 TMED8Q6PL24 325 aaPredicted RBP8□□□□□ -1.13
SSBP1-213ENST00000496622 PTPRUQ92729 1446 aa8□□□□□ -1.13
SSBP1-213ENST00000496622 U2AF1L5P0DN76 240 aaPredicted RBP8□□□□□ -1.13
SSBP1-213ENST00000496622 U2AF1Q01081 240 aaKnown RBP eCLIP8□□□□□ -1.13
SSBP1-213ENST00000496622 HDGFL2Q7Z4V5 671 aaPredicted RBP8□□□□□ -1.13
SSBP1-213ENST00000496622 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
SSBP1-213ENST00000496622 SMAPO00193 183 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 FECHP22830 423 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 RRS1Q15050 365 aaKnown RBP7.99□□□□□ -1.13
SSBP1-213ENST00000496622 FTSJ3Q8IY81 847 aaKnown RBP7.99□□□□□ -1.13
SSBP1-213ENST00000496622 FBXW7Q969H0 707 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.99□□□□□ -1.13
SSBP1-213ENST00000496622 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 NPC1L1Q9UHC9 1359 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 NLRP1Q9C000 1473 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 NWD1Q149M9 1564 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 NUTM2GQ5VZR2 741 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 ADGRD1Q6QNK2 874 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 EPAS1Q99814 870 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
SSBP1-213ENST00000496622 NRXN3Q9Y4C0 1643 aa7.98□□□□□ -1.13
SSBP1-213ENST00000496622 MED14O60244 1454 aa7.98□□□□□ -1.13
SSBP1-213ENST00000496622 WWC1Q8IX03 1113 aa7.98□□□□□ -1.13
SSBP1-213ENST00000496622 ZNF592Q92610 1267 aa7.98□□□□□ -1.13
SSBP1-213ENST00000496622 SEPT9Q9UHD8 586 aaPredicted RBP7.98□□□□□ -1.13
SSBP1-213ENST00000496622 RCAN3Q9UKA8 241 aa7.98□□□□□ -1.13
SSBP1-213ENST00000496622 SMG6Q86US8 1419 aaKnown RBP7.98□□□□□ -1.13
SSBP1-213ENST00000496622 PLSCR2Q9NRY7 297 aa7.98□□□□□ -1.13
SSBP1-213ENST00000496622 TSKSQ9UJT2 592 aa7.98□□□□□ -1.13
SSBP1-213ENST00000496622 PPIP5K1Q6PFW1 1433 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 TICAM2Q86XR7 235 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 SPNS2Q8IVW8 549 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 TCP11L2Q8N4U5 519 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 PLEKHG1Q9ULL1 1385 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 HMOX1P09601 288 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 CANXP27824 592 aaKnown RBP7.97□□□□□ -1.13
SSBP1-213ENST00000496622 C20orf194Q5TEA3 1177 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 PUS7Q96PZ0 661 aaKnown RBP7.97□□□□□ -1.13
SSBP1-213ENST00000496622 POLKQ9UBT6 870 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 VPS9D1Q9Y2B5 631 aa7.97□□□□□ -1.13
SSBP1-213ENST00000496622 ACEP12821 1306 aa7.96□□□□□ -1.13
SSBP1-213ENST00000496622 BLMP54132 1417 aaPredicted RBP7.96□□□□□ -1.13
SSBP1-213ENST00000496622 FAM135BQ49AJ0 1406 aa7.96□□□□□ -1.13
SSBP1-213ENST00000496622 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.14
SSBP1-213ENST00000496622 TNS4Q8IZW8 715 aa7.96□□□□□ -1.14
SSBP1-213ENST00000496622 TBX22Q9Y458 520 aa7.96□□□□□ -1.14
SSBP1-213ENST00000496622 UBR1Q8IWV7 1749 aa7.96□□□□□ -1.14
SSBP1-213ENST00000496622 ANKLE2Q86XL3 938 aa7.96□□□□□ -1.14
SSBP1-213ENST00000496622 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
SSBP1-213ENST00000496622 PTGDRQ13258 359 aa7.95□□□□□ -1.14
SSBP1-213ENST00000496622 POLR3AO14802 1390 aaPredicted RBP7.95□□□□□ -1.14
SSBP1-213ENST00000496622 XPCQ01831 940 aaPredicted RBP7.95□□□□□ -1.14
SSBP1-213ENST00000496622 EXOC6Q8TAG9 804 aa7.95□□□□□ -1.14
SSBP1-213ENST00000496622 ZNF521Q96K83 1311 aa7.95□□□□□ -1.14
SSBP1-213ENST00000496622 PBX2P40425 430 aa7.94□□□□□ -1.14
SSBP1-213ENST00000496622 NGDNQ8NEJ9 315 aaKnown RBP7.94□□□□□ -1.14
SSBP1-213ENST00000496622 NLRP7Q8WX94 980 aa7.94□□□□□ -1.14
SSBP1-213ENST00000496622 CFAP53Q96M91 514 aa7.94□□□□□ -1.14
SSBP1-213ENST00000496622 BCAR3O75815 825 aa7.94□□□□□ -1.14
SSBP1-213ENST00000496622 PADI6Q6TGC4 694 aa7.94□□□□□ -1.14
SSBP1-213ENST00000496622 BCL2L13Q9BXK5 485 aa7.94□□□□□ -1.14
SSBP1-213ENST00000496622 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
SSBP1-213ENST00000496622 GPR37O15354 613 aa7.93□□□□□ -1.14
SSBP1-213ENST00000496622 RRP1P56182 461 aaKnown RBP7.93□□□□□ -1.14
SSBP1-213ENST00000496622 LMOD2Q6P5Q4 547 aa7.93□□□□□ -1.14
SSBP1-213ENST00000496622 SKAP1Q86WV1 359 aa7.93□□□□□ -1.14
SSBP1-213ENST00000496622 RGS12O14924 1447 aa7.93□□□□□ -1.14
SSBP1-213ENST00000496622 SLFN5Q08AF3 891 aa7.93□□□□□ -1.14
SSBP1-213ENST00000496622 COG3Q96JB2 828 aa7.93□□□□□ -1.14
SSBP1-213ENST00000496622 PHACTR3Q96KR7 559 aa7.93□□□□□ -1.14
SSBP1-213ENST00000496622 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
SSBP1-213ENST00000496622 FANCIQ9NVI1 1328 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 DIAPH1O60610 1272 aaKnown RBP7.92□□□□□ -1.14
SSBP1-213ENST00000496622 GIGYF1O75420 1035 aaPredicted RBP7.92□□□□□ -1.14
SSBP1-213ENST00000496622 PDE3BQ13370 1112 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 RUNDC1Q96C34 613 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 TECPR2O15040 1411 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 CPSF1Q10570 1443 aaKnown RBP7.92□□□□□ -1.14
SSBP1-213ENST00000496622 HRO43593 1189 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 HSP90AB2PQ58FF8 381 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 TSR2Q969E8 191 aaKnown RBP7.92□□□□□ -1.14
SSBP1-213ENST00000496622 PPP4R2Q9NY27 417 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 PRDM4Q9UKN5 801 aa7.92□□□□□ -1.14
SSBP1-213ENST00000496622 ATP7BP35670 1465 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 BCL9LQ86UU0 1499 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 ARHGAP23Q9P227 1491 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms