RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 ST20-MTHFSA0A0A6YYL1 179 aa10.03□□□□□ -0.8
UBP1-213ENST00000496310 SSFA2P28290 1259 aa10.03□□□□□ -0.8
UBP1-213ENST00000496310 C9orf131Q5VYM1 1079 aa10.03□□□□□ -0.8
UBP1-213ENST00000496310 KLRG1Q96E93 195 aa10.03□□□□□ -0.8
UBP1-213ENST00000496310 RRAGCQ9HB90 399 aa10.03□□□□□ -0.8
UBP1-213ENST00000496310 CGNL1Q0VF96 1302 aa10.03□□□□□ -0.8
UBP1-213ENST00000496310 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.8
UBP1-213ENST00000496310 SMG6Q86US8 1419 aaKnown RBP10.02□□□□□ -0.81
UBP1-213ENST00000496310 PPM1GO15355 546 aaPredicted RBP10.02□□□□□ -0.81
UBP1-213ENST00000496310 C16orf71Q8IYS4 520 aaPredicted RBP10.02□□□□□ -0.81
UBP1-213ENST00000496310 TNS4Q8IZW8 715 aa10.02□□□□□ -0.81
UBP1-213ENST00000496310 TESK2Q96S53 571 aa10.02□□□□□ -0.81
UBP1-213ENST00000496310 EMILIN1Q9Y6C2 1016 aa10.02□□□□□ -0.81
UBP1-213ENST00000496310 PCNTO95613 3336 aa10.02□□□□□ -0.81
UBP1-213ENST00000496310 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
UBP1-213ENST00000496310 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
UBP1-213ENST00000496310 RBM46Q8TBY0 533 aaKnown RBP10.01□□□□□ -0.81
UBP1-213ENST00000496310 ATG3Q9NT62 314 aa10.01□□□□□ -0.81
UBP1-213ENST00000496310 TMOD3Q9NYL9 352 aa10.01□□□□□ -0.81
UBP1-213ENST00000496310 INSRP06213 1382 aa10.01□□□□□ -0.81
UBP1-213ENST00000496310 AFDNP55196 1824 aaKnown RBP10□□□□□ -0.81
UBP1-213ENST00000496310 KCNA3P22001 575 aa10□□□□□ -0.81
UBP1-213ENST00000496310 TMF1P82094 1093 aa10□□□□□ -0.81
UBP1-213ENST00000496310 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
UBP1-213ENST00000496310 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
UBP1-213ENST00000496310 SLC4A9Q96Q91 983 aa10□□□□□ -0.81
UBP1-213ENST00000496310 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
UBP1-213ENST00000496310 TNRC6CQ9HCJ0 1690 aaKnown RBP9.99□□□□□ -0.81
UBP1-213ENST00000496310 C10orf71Q711Q0 1435 aa9.99□□□□□ -0.81
UBP1-213ENST00000496310 NSD3Q9BZ95 1437 aa9.99□□□□□ -0.81
UBP1-213ENST00000496310 VIRMAQ69YN4 1812 aaKnown RBP9.99□□□□□ -0.81
UBP1-213ENST00000496310 CHRNA5P30532 468 aa9.99□□□□□ -0.81
UBP1-213ENST00000496310 TGFB2P61812 414 aa9.99□□□□□ -0.81
UBP1-213ENST00000496310 JMYQ8N9B5 988 aa9.99□□□□□ -0.81
UBP1-213ENST00000496310 RNF181Q9P0P0 153 aa9.99□□□□□ -0.81
UBP1-213ENST00000496310 RTCBQ9Y3I0 505 aaKnown RBP9.99□□□□□ -0.81
UBP1-213ENST00000496310 FLT4P35916 1363 aa9.99□□□□□ -0.81
UBP1-213ENST00000496310 GYS1P13807 737 aa9.98□□□□□ -0.81
UBP1-213ENST00000496310 PRELPP51888 382 aa9.98□□□□□ -0.81
UBP1-213ENST00000496310 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
UBP1-213ENST00000496310 CCDC87Q9NVE4 849 aa9.98□□□□□ -0.81
UBP1-213ENST00000496310 SRP68Q9UHB9 627 aaKnown RBP9.98□□□□□ -0.81
UBP1-213ENST00000496310 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
UBP1-213ENST00000496310 CACNA1SQ13698 1873 aa9.98□□□□□ -0.81
UBP1-213ENST00000496310 PHKG2P15735 406 aa9.97□□□□□ -0.81
UBP1-213ENST00000496310 RASSF7Q02833 373 aa9.97□□□□□ -0.81
UBP1-213ENST00000496310 NLGN1Q8N2Q7 840 aa9.97□□□□□ -0.81
UBP1-213ENST00000496310 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
UBP1-213ENST00000496310 EYA1Q99502 592 aa9.97□□□□□ -0.81
UBP1-213ENST00000496310 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
UBP1-213ENST00000496310 ANKRD26Q9UPS8 1709 aa9.96□□□□□ -0.81
UBP1-213ENST00000496310 HSPA1AP0DMV8 641 aaKnown RBP9.96□□□□□ -0.82
UBP1-213ENST00000496310 HSPA1BP0DMV9 641 aaKnown RBP9.96□□□□□ -0.82
UBP1-213ENST00000496310 RFC4P35249 363 aa9.96□□□□□ -0.82
UBP1-213ENST00000496310 FSTL1Q12841 308 aa9.96□□□□□ -0.82
UBP1-213ENST00000496310 FKBP8Q14318 412 aa9.96□□□□□ -0.82
UBP1-213ENST00000496310 CARD14Q9BXL6 1004 aa9.96□□□□□ -0.82
UBP1-213ENST00000496310 TIAM2Q8IVF5 1701 aa9.96□□□□□ -0.82
UBP1-213ENST00000496310 HMGB2P26583 209 aaKnown RBP9.95□□□□□ -0.82
UBP1-213ENST00000496310 DDR1Q08345 913 aa9.95□□□□□ -0.82
UBP1-213ENST00000496310 DALRD3Q5D0E6 543 aaKnown RBP9.95□□□□□ -0.82
UBP1-213ENST00000496310 IFNL2Q8IZJ0 200 aa9.95□□□□□ -0.82
UBP1-213ENST00000496310 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
UBP1-213ENST00000496310 PIM2Q9P1W9 311 aa9.95□□□□□ -0.82
UBP1-213ENST00000496310 KDM2BQ8NHM5 1336 aa9.95□□□□□ -0.82
UBP1-213ENST00000496310 KDRP35968 1356 aa9.95□□□□□ -0.82
UBP1-213ENST00000496310 TJP1Q07157 1748 aa9.94□□□□□ -0.82
UBP1-213ENST00000496310 TONSLQ96HA7 1378 aa9.94□□□□□ -0.82
UBP1-213ENST00000496310 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
UBP1-213ENST00000496310 RPS6KA4O75676 772 aa9.94□□□□□ -0.82
UBP1-213ENST00000496310 TNNT2P45379 298 aaPredicted RBP9.94□□□□□ -0.82
UBP1-213ENST00000496310 DICER1Q9UPY3 1922 aaKnown RBP9.94□□□□□ -0.82
UBP1-213ENST00000496310 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
UBP1-213ENST00000496310 PLEKHG2Q9H7P9 1386 aa9.93□□□□□ -0.82
UBP1-213ENST00000496310 SMC1BQ8NDV3 1235 aa9.93□□□□□ -0.82
UBP1-213ENST00000496310 DLEC1Q9Y238 1755 aa9.93□□□□□ -0.82
UBP1-213ENST00000496310 ZNF831Q5JPB2 1677 aa9.93□□□□□ -0.82
UBP1-213ENST00000496310 ADAMTS7Q9UKP4 1686 aa9.93□□□□□ -0.82
UBP1-213ENST00000496310 SCN11AQ9UI33 1791 aa9.91□□□□□ -0.82
UBP1-213ENST00000496310 CNTNAP4Q9C0A0 1308 aa9.91□□□□□ -0.82
UBP1-213ENST00000496310 CRKLP46109 303 aaKnown RBP9.91□□□□□ -0.82
UBP1-213ENST00000496310 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
UBP1-213ENST00000496310 ANKRD31Q8N7Z5 1873 aa9.91□□□□□ -0.82
UBP1-213ENST00000496310 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.82
UBP1-213ENST00000496310 WASHC2AQ641Q2 1341 aa9.9□□□□□ -0.82
UBP1-213ENST00000496310 CABP4P57796 275 aa9.9□□□□□ -0.82
UBP1-213ENST00000496310 EIF4A2Q14240 407 aaKnown RBP9.9□□□□□ -0.82
UBP1-213ENST00000496310 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
UBP1-213ENST00000496310 POLKQ9UBT6 870 aa9.9□□□□□ -0.82
UBP1-213ENST00000496310 MKRN1Q9UHC7 482 aaKnown RBP9.9□□□□□ -0.82
UBP1-213ENST00000496310 KIF24Q5T7B8 1368 aa9.89□□□□□ -0.83
UBP1-213ENST00000496310 USP42Q9H9J4 1324 aaKnown RBP9.89□□□□□ -0.83
UBP1-213ENST00000496310 POTECB2RU33 542 aa9.89□□□□□ -0.83
UBP1-213ENST00000496310 POLRMTO00411 1230 aaKnown RBP9.89□□□□□ -0.83
UBP1-213ENST00000496310 USPL1Q5W0Q7 1092 aa9.89□□□□□ -0.83
UBP1-213ENST00000496310 POLR3GLQ9BT43 218 aa9.89□□□□□ -0.83
UBP1-213ENST00000496310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.836e-7■□□□□ 8.1
UBP1-213ENST00000496310 FER1L6Q2WGJ9 1857 aa9.89□□□□□ -0.83
UBP1-213ENST00000496310 ERVV-2B6SEH9 535 aa9.88□□□□□ -0.83
UBP1-213ENST00000496310 VEGFAP15692 232 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms