RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 DIAPH1O60610 1272 aaKnown RBP9.77□□□□□ -0.85
VPS52-221ENST00000495755 CABP4P57796 275 aa9.77□□□□□ -0.85
VPS52-221ENST00000495755 C1orf141Q5JVX7 400 aa9.77□□□□□ -0.85
VPS52-221ENST00000495755 AK7Q96M32 723 aa9.77□□□□□ -0.85
VPS52-221ENST00000495755 SLC4A9Q96Q91 983 aa9.77□□□□□ -0.85
VPS52-221ENST00000495755 C4BP0C0L5 1744 aa9.76□□□□□ -0.85
VPS52-221ENST00000495755 HMOX1P09601 288 aa9.76□□□□□ -0.85
VPS52-221ENST00000495755 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
VPS52-221ENST00000495755 AKAP4Q5JQC9 854 aa9.76□□□□□ -0.85
VPS52-221ENST00000495755 SMIM5Q71RC9 77 aa9.76□□□□□ -0.85
VPS52-221ENST00000495755 COL3A1P02461 1466 aaPredicted RBP9.75□□□□□ -0.85
VPS52-221ENST00000495755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
VPS52-221ENST00000495755 SSFA2P28290 1259 aa9.75□□□□□ -0.85
VPS52-221ENST00000495755 CNGB1Q14028 1251 aaPredicted RBP9.75□□□□□ -0.85
VPS52-221ENST00000495755 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
VPS52-221ENST00000495755 MTHFSDQ2M296 383 aaKnown RBP9.74□□□□□ -0.85
VPS52-221ENST00000495755 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
VPS52-221ENST00000495755 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
VPS52-221ENST00000495755 LGR6Q9HBX8 967 aa9.74□□□□□ -0.85
VPS52-221ENST00000495755 UBR3Q6ZT12 1888 aa9.73□□□□□ -0.85
VPS52-221ENST00000495755 GNPATO15228 680 aa9.73□□□□□ -0.85
VPS52-221ENST00000495755 PHF14O94880 888 aa9.73□□□□□ -0.85
VPS52-221ENST00000495755 YY1P25490 414 aa9.73□□□□□ -0.85
VPS52-221ENST00000495755 RC3H1Q5TC82 1133 aaKnown RBP9.73□□□□□ -0.85
VPS52-221ENST00000495755 ZNF831Q5JPB2 1677 aa9.73□□□□□ -0.85
VPS52-221ENST00000495755 U2SURPO15042 1029 aaKnown RBP9.72□□□□□ -0.85
VPS52-221ENST00000495755 RNMTO43148 476 aaKnown RBP9.72□□□□□ -0.85
VPS52-221ENST00000495755 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
VPS52-221ENST00000495755 PPP2R1AP30153 589 aa9.72□□□□□ -0.85
VPS52-221ENST00000495755 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
VPS52-221ENST00000495755 NLGN2Q8NFZ4 835 aa9.72□□□□□ -0.85
VPS52-221ENST00000495755 SLC52A2Q9HAB3 445 aa9.72□□□□□ -0.85
VPS52-221ENST00000495755 CNTNAP4Q9C0A0 1308 aa9.72□□□□□ -0.85
VPS52-221ENST00000495755 SCN11AQ9UI33 1791 aa9.71□□□□□ -0.85
VPS52-221ENST00000495755 RPS6KA4O75676 772 aa9.71□□□□□ -0.86
VPS52-221ENST00000495755 TRAPPC3LQ5T215 181 aa9.71□□□□□ -0.86
VPS52-221ENST00000495755 CFAP53Q96M91 514 aa9.71□□□□□ -0.86
VPS52-221ENST00000495755 RTCBQ9Y3I0 505 aaKnown RBP9.71□□□□□ -0.86
VPS52-221ENST00000495755 CD2APQ9Y5K6 639 aa9.71□□□□□ -0.86
VPS52-221ENST00000495755 ADRA2BP18089 450 aa9.7□□□□□ -0.86
VPS52-221ENST00000495755 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
VPS52-221ENST00000495755 MRC1P22897 1456 aa9.7□□□□□ -0.86
VPS52-221ENST00000495755 ADAMTS7Q9UKP4 1686 aa9.7□□□□□ -0.86
VPS52-221ENST00000495755 COL5A3P25940 1745 aaPredicted RBP9.69□□□□□ -0.86
VPS52-221ENST00000495755 CRKLP46109 303 aaKnown RBP9.69□□□□□ -0.86
VPS52-221ENST00000495755 GPR162Q16538 588 aa9.69□□□□□ -0.86
VPS52-221ENST00000495755 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
VPS52-221ENST00000495755 IL17REQ8NFR9 667 aa9.69□□□□□ -0.86
VPS52-221ENST00000495755 GAS2L2Q8NHY3 880 aa9.69□□□□□ -0.86
VPS52-221ENST00000495755 PHACTR3Q96KR7 559 aa9.69□□□□□ -0.86
VPS52-221ENST00000495755 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
VPS52-221ENST00000495755 GNAT3A8MTJ3 354 aa9.68□□□□□ -0.86
VPS52-221ENST00000495755 SLC39A6Q13433 755 aa9.68□□□□□ -0.86
VPS52-221ENST00000495755 NLGN1Q8N2Q7 840 aa9.68□□□□□ -0.86
VPS52-221ENST00000495755 NUDCQ9Y266 331 aa9.68□□□□□ -0.86
VPS52-221ENST00000495755 CICQ96RK0 1608 aaPredicted RBP9.67□□□□□ -0.86
VPS52-221ENST00000495755 MYH14Q7Z406 1995 aaKnown RBP9.67□□□□□ -0.86
VPS52-221ENST00000495755 FCHSD2O94868 740 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 MMP10P09238 476 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 U2AF1L5P0DN76 240 aaPredicted RBP9.67□□□□□ -0.86
VPS52-221ENST00000495755 CYP19A1P11511 503 aaPredicted RBP9.67□□□□□ -0.86
VPS52-221ENST00000495755 GYS1P13807 737 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
VPS52-221ENST00000495755 PRKAR2BP31323 418 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 RFC4P35249 363 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 U2AF1Q01081 240 aaKnown RBP eCLIP9.67□□□□□ -0.86
VPS52-221ENST00000495755 DNAJC10Q8IXB1 793 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 VSIG10Q8N0Z9 540 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 TJP1Q07157 1748 aa9.67□□□□□ -0.86
VPS52-221ENST00000495755 KCPQ6ZWJ8 1503 aa9.66□□□□□ -0.86
VPS52-221ENST00000495755 PELP1Q8IZL8 1130 aaKnown RBP9.66□□□□□ -0.86
VPS52-221ENST00000495755 CCDC87Q9NVE4 849 aa9.66□□□□□ -0.86
VPS52-221ENST00000495755 CEMIPQ8WUJ3 1361 aa9.65□□□□□ -0.86
VPS52-221ENST00000495755 GRIN3BO60391 1043 aa9.65□□□□□ -0.86
VPS52-221ENST00000495755 SRP68Q9UHB9 627 aaKnown RBP9.65□□□□□ -0.86
VPS52-221ENST00000495755 SOS1Q07889 1333 aaPredicted RBP9.64□□□□□ -0.87
VPS52-221ENST00000495755 USP42Q9H9J4 1324 aaKnown RBP9.64□□□□□ -0.87
VPS52-221ENST00000495755 VIRMAQ69YN4 1812 aaKnown RBP9.64□□□□□ -0.87
VPS52-221ENST00000495755 TEFQ10587 303 aa9.64□□□□□ -0.87
VPS52-221ENST00000495755 ZNF790Q6PG37 636 aa9.64□□□□□ -0.87
VPS52-221ENST00000495755 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
VPS52-221ENST00000495755 ZNF496Q96IT1 587 aaPredicted RBP9.64□□□□□ -0.87
VPS52-221ENST00000495755 CHD4Q14839 1912 aa9.63□□□□□ -0.87
VPS52-221ENST00000495755 FKBP8Q14318 412 aa9.63□□□□□ -0.87
VPS52-221ENST00000495755 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
VPS52-221ENST00000495755 ZBTB1Q9Y2K1 713 aa9.63□□□□□ -0.87
VPS52-221ENST00000495755 UBR2Q8IWV8 1755 aa9.63□□□□□ -0.87
VPS52-221ENST00000495755 C4AP0C0L4 1744 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 KCNQ3O43525 872 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 HTATSF1O43719 755 aaKnown RBP9.62□□□□□ -0.87
VPS52-221ENST00000495755 STARD3NLO95772 234 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 TM4SF1P30408 202 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 TGFB2P61812 414 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 DDR1Q08345 913 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 MCM10Q7L590 875 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 TEX13AQ9BXU3 409 aaPredicted RBP9.62□□□□□ -0.87
VPS52-221ENST00000495755 NARFQ9UHQ1 456 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 PARP3Q9Y6F1 533 aa9.62□□□□□ -0.87
VPS52-221ENST00000495755 C10orf71Q711Q0 1435 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms