RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 COL24A1Q17RW2 1714 aa14.57□□□□□ -0.08
RFTN1-211ENST00000495666 VIRMAQ69YN4 1812 aaKnown RBP14.57□□□□□ -0.08
RFTN1-211ENST00000495666 GOLGB1Q14789 3259 aaKnown RBP14.56□□□□□ -0.08
RFTN1-211ENST00000495666 CABP4P57796 275 aa14.56□□□□□ -0.08
RFTN1-211ENST00000495666 NKX1-1Q15270 411 aaPredicted RBP14.56□□□□□ -0.08
RFTN1-211ENST00000495666 ATG3Q9NT62 314 aa14.56□□□□□ -0.08
RFTN1-211ENST00000495666 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
RFTN1-211ENST00000495666 MTHFSP49914 203 aa14.55□□□□□ -0.08
RFTN1-211ENST00000495666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.55□□□□□ -0.08
RFTN1-211ENST00000495666 KDM6AO15550 1401 aaPredicted RBP14.55□□□□□ -0.08
RFTN1-211ENST00000495666 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
RFTN1-211ENST00000495666 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.09
RFTN1-211ENST00000495666 HSP90AB1P08238 724 aaKnown RBP14.52□□□□□ -0.09
RFTN1-211ENST00000495666 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
RFTN1-211ENST00000495666 ZNF784Q8NCA9 323 aaPredicted RBP14.52□□□□□ -0.09
RFTN1-211ENST00000495666 FLAD1Q8NFF5 587 aa14.52□□□□□ -0.09
RFTN1-211ENST00000495666 DCAF5Q96JK2 942 aa14.52□□□□□ -0.09
RFTN1-211ENST00000495666 SCN11AQ9UI33 1791 aa14.52□□□□□ -0.09
RFTN1-211ENST00000495666 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.09
RFTN1-211ENST00000495666 MAP3K5Q99683 1374 aa14.51□□□□□ -0.09
RFTN1-211ENST00000495666 YBX3P16989 372 aaKnown RBP eCLIP14.51□□□□□ -0.09
RFTN1-211ENST00000495666 IL13P35225 146 aa14.51□□□□□ -0.09
RFTN1-211ENST00000495666 AMOTQ4VCS5 1084 aa14.51□□□□□ -0.09
RFTN1-211ENST00000495666 NFATC2IPQ8NCF5 419 aa14.51□□□□□ -0.09
RFTN1-211ENST00000495666 SLC4A9Q96Q91 983 aa14.5□□□□□ -0.09
RFTN1-211ENST00000495666 C4AP0C0L4 1744 aa14.49□□□□□ -0.09
RFTN1-211ENST00000495666 ERVV-2B6SEH9 535 aa14.49□□□□□ -0.09
RFTN1-211ENST00000495666 SSFA2P28290 1259 aa14.49□□□□□ -0.09
RFTN1-211ENST00000495666 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
RFTN1-211ENST00000495666 RTCBQ9Y3I0 505 aaKnown RBP14.49□□□□□ -0.09
RFTN1-211ENST00000495666 N4BP2Q86UW6 1770 aaPredicted RBP14.49□□□□□ -0.09
RFTN1-211ENST00000495666 KDRP35968 1356 aa14.48□□□□□ -0.09
RFTN1-211ENST00000495666 CICQ96RK0 1608 aaPredicted RBP14.48□□□□□ -0.09
RFTN1-211ENST00000495666 MYH14Q7Z406 1995 aaKnown RBP14.48□□□□□ -0.09
RFTN1-211ENST00000495666 DIAPH1O60610 1272 aaKnown RBP14.48□□□□□ -0.09
RFTN1-211ENST00000495666 LGR6Q9HBX8 967 aa14.48□□□□□ -0.09
RFTN1-211ENST00000495666 TJP1Q07157 1748 aa14.48□□□□□ -0.09
RFTN1-211ENST00000495666 MMP10P09238 476 aa14.47□□□□□ -0.09
RFTN1-211ENST00000495666 SLC39A6Q13433 755 aa14.47□□□□□ -0.09
RFTN1-211ENST00000495666 TRAPPC3LQ5T215 181 aa14.47□□□□□ -0.09
RFTN1-211ENST00000495666 RFC4P35249 363 aa14.46□□□□□ -0.09
RFTN1-211ENST00000495666 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.09
RFTN1-211ENST00000495666 PER1O15534 1290 aaPredicted RBP14.45□□□□□ -0.1
RFTN1-211ENST00000495666 AKAP4Q5JQC9 854 aa14.45□□□□□ -0.1
RFTN1-211ENST00000495666 ARHGEF1Q92888 912 aaKnown RBP14.45□□□□□ -0.1
RFTN1-211ENST00000495666 SRP68Q9UHB9 627 aaKnown RBP14.45□□□□□ -0.1
RFTN1-211ENST00000495666 ADRA2BP18089 450 aa14.44□□□□□ -0.1
RFTN1-211ENST00000495666 HMGB2P26583 209 aaKnown RBP14.44□□□□□ -0.1
RFTN1-211ENST00000495666 CRKLP46109 303 aaKnown RBP14.44□□□□□ -0.1
RFTN1-211ENST00000495666 MTHFSDQ2M296 383 aaKnown RBP14.44□□□□□ -0.1
RFTN1-211ENST00000495666 CD2APQ9Y5K6 639 aa14.44□□□□□ -0.1
RFTN1-211ENST00000495666 RNMTO43148 476 aaKnown RBP14.43□□□□□ -0.1
RFTN1-211ENST00000495666 DNAJC10Q8IXB1 793 aa14.43□□□□□ -0.1
RFTN1-211ENST00000495666 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
RFTN1-211ENST00000495666 SLC52A2Q9HAB3 445 aa14.42□□□□□ -0.1
RFTN1-211ENST00000495666 ZNF330Q9Y3S2 320 aaPredicted RBP14.42□□□□□ -0.1
RFTN1-211ENST00000495666 COL3A1P02461 1466 aaPredicted RBP14.42□□□□□ -0.1
RFTN1-211ENST00000495666 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
RFTN1-211ENST00000495666 PARP3Q9Y6F1 533 aa14.41□□□□□ -0.1
RFTN1-211ENST00000495666 ZNF831Q5JPB2 1677 aa14.41□□□□□ -0.1
RFTN1-211ENST00000495666 PLEKHG2Q9H7P9 1386 aa14.4□□□□□ -0.1
RFTN1-211ENST00000495666 SENP3-EIF4A1A0A087X0R7 540 aa14.4□□□□□ -0.1
RFTN1-211ENST00000495666 A0A0G2JLW4 131 aa14.4□□□□□ -0.1
RFTN1-211ENST00000495666 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
RFTN1-211ENST00000495666 GYS1P13807 737 aa14.4□□□□□ -0.1
RFTN1-211ENST00000495666 BCS1LQ9Y276 419 aa14.4□□□□□ -0.1
RFTN1-211ENST00000495666 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
RFTN1-211ENST00000495666 CFAP53Q96M91 514 aa14.39□□□□□ -0.11
RFTN1-211ENST00000495666 KIAA1551Q9HCM1 1747 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 KCPQ6ZWJ8 1503 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
RFTN1-211ENST00000495666 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 TEFQ10587 303 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 FKBP8Q14318 412 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 TTC5Q8N0Z6 440 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 NLGN1Q8N2Q7 840 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 CCDC87Q9NVE4 849 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 ATP10DQ9P241 1426 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 MRC1P22897 1456 aa14.38□□□□□ -0.11
RFTN1-211ENST00000495666 KIF13BQ9NQT8 1826 aa14.37□□□□□ -0.11
RFTN1-211ENST00000495666 U2AF1L5P0DN76 240 aaPredicted RBP14.37□□□□□ -0.11
RFTN1-211ENST00000495666 U2AF1Q01081 240 aaKnown RBP eCLIP14.37□□□□□ -0.11
RFTN1-211ENST00000495666 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
RFTN1-211ENST00000495666 USPL1Q5W0Q7 1092 aa14.37□□□□□ -0.11
RFTN1-211ENST00000495666 ZBTB1Q9Y2K1 713 aa14.37□□□□□ -0.11
RFTN1-211ENST00000495666 ZPR1O75312 459 aa14.36□□□□□ -0.11
RFTN1-211ENST00000495666 DPEP1P16444 411 aa14.36□□□□□ -0.11
RFTN1-211ENST00000495666 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
RFTN1-211ENST00000495666 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
RFTN1-211ENST00000495666 USP42Q9H9J4 1324 aaKnown RBP14.36□□□□□ -0.11
RFTN1-211ENST00000495666 UBR2Q8IWV8 1755 aa14.35□□□□□ -0.11
RFTN1-211ENST00000495666 C10orf71Q711Q0 1435 aa14.35□□□□□ -0.11
RFTN1-211ENST00000495666 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
RFTN1-211ENST00000495666 FCHSD2O94868 740 aa14.35□□□□□ -0.11
RFTN1-211ENST00000495666 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
RFTN1-211ENST00000495666 PHACTR3Q96KR7 559 aa14.35□□□□□ -0.11
RFTN1-211ENST00000495666 COL15A1P39059 1388 aa14.34□□□□□ -0.11
RFTN1-211ENST00000495666 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
RFTN1-211ENST00000495666 ADAMTS7Q9UKP4 1686 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms