RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 C9orf131Q5VYM1 1079 aa16.04■□□□□ 0.16
HLA-DOA-206ENST00000495532 DPEP1P16444 411 aa16.03■□□□□ 0.16
HLA-DOA-206ENST00000495532 ITPK1Q13572 414 aa16.03■□□□□ 0.16
HLA-DOA-206ENST00000495532 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
HLA-DOA-206ENST00000495532 FCHSD2O94868 740 aa16.02■□□□□ 0.16
HLA-DOA-206ENST00000495532 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
HLA-DOA-206ENST00000495532 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
HLA-DOA-206ENST00000495532 INSRP06213 1382 aa16■□□□□ 0.15
HLA-DOA-206ENST00000495532 COL5A3P25940 1745 aaPredicted RBP16■□□□□ 0.15
HLA-DOA-206ENST00000495532 ZNF831Q5JPB2 1677 aa16■□□□□ 0.15
HLA-DOA-206ENST00000495532 KCNA3P22001 575 aa16■□□□□ 0.15
HLA-DOA-206ENST00000495532 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
HLA-DOA-206ENST00000495532 HSP90AB2PQ58FF8 381 aa16■□□□□ 0.15
HLA-DOA-206ENST00000495532 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
HLA-DOA-206ENST00000495532 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
HLA-DOA-206ENST00000495532 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
HLA-DOA-206ENST00000495532 RRAGCQ9HB90 399 aa15.99■□□□□ 0.15
HLA-DOA-206ENST00000495532 NCAPD2Q15021 1401 aa15.99■□□□□ 0.15
HLA-DOA-206ENST00000495532 ATP6V1AP38606 617 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 NLGN1Q8N2Q7 840 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 SMC1BQ8NDV3 1235 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 KIF20BQ96Q89 1820 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 FLT4P35916 1363 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 KDRP35968 1356 aa15.98■□□□□ 0.15
HLA-DOA-206ENST00000495532 TMF1P82094 1093 aa15.97■□□□□ 0.15
HLA-DOA-206ENST00000495532 DCAF5Q96JK2 942 aa15.97■□□□□ 0.15
HLA-DOA-206ENST00000495532 RNF181Q9P0P0 153 aa15.97■□□□□ 0.15
HLA-DOA-206ENST00000495532 TMOD3Q9NYL9 352 aa15.96■□□□□ 0.15
HLA-DOA-206ENST00000495532 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
HLA-DOA-206ENST00000495532 KIF24Q5T7B8 1368 aa15.96■□□□□ 0.15
HLA-DOA-206ENST00000495532 FYB1O15117 783 aa15.95■□□□□ 0.14
HLA-DOA-206ENST00000495532 SLC34A2O95436 690 aa15.95■□□□□ 0.14
HLA-DOA-206ENST00000495532 GYS1P13807 737 aa15.95■□□□□ 0.14
HLA-DOA-206ENST00000495532 TRAPPC3LQ5T215 181 aa15.95■□□□□ 0.14
HLA-DOA-206ENST00000495532 GGNBP2Q9H3C7 697 aa15.95■□□□□ 0.14
HLA-DOA-206ENST00000495532 RTCBQ9Y3I0 505 aaKnown RBP15.95■□□□□ 0.14
HLA-DOA-206ENST00000495532 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
HLA-DOA-206ENST00000495532 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
HLA-DOA-206ENST00000495532 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
HLA-DOA-206ENST00000495532 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
HLA-DOA-206ENST00000495532 ADRA2BP18089 450 aa15.93■□□□□ 0.14
HLA-DOA-206ENST00000495532 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
HLA-DOA-206ENST00000495532 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
HLA-DOA-206ENST00000495532 TESK2Q96S53 571 aa15.93■□□□□ 0.14
HLA-DOA-206ENST00000495532 PARP3Q9Y6F1 533 aa15.93■□□□□ 0.14
HLA-DOA-206ENST00000495532 TIAM2Q8IVF5 1701 aa15.92■□□□□ 0.14
HLA-DOA-206ENST00000495532 DALRD3Q5D0E6 543 aaKnown RBP15.92■□□□□ 0.14
HLA-DOA-206ENST00000495532 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
HLA-DOA-206ENST00000495532 KDM6AO15550 1401 aaPredicted RBP15.92■□□□□ 0.14
HLA-DOA-206ENST00000495532 CCDC88AQ3V6T2 1871 aa15.91■□□□□ 0.14
HLA-DOA-206ENST00000495532 RC3H1Q5TC82 1133 aaKnown RBP15.9■□□□□ 0.14
HLA-DOA-206ENST00000495532 CNTNAP4Q9C0A0 1308 aa15.9■□□□□ 0.14
HLA-DOA-206ENST00000495532 ZC3H4Q9UPT8 1303 aaKnown RBP15.9■□□□□ 0.14
HLA-DOA-206ENST00000495532 TONSLQ96HA7 1378 aa15.89■□□□□ 0.13
HLA-DOA-206ENST00000495532 PHKG2P15735 406 aa15.89■□□□□ 0.13
HLA-DOA-206ENST00000495532 RFC4P35249 363 aa15.89■□□□□ 0.13
HLA-DOA-206ENST00000495532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.13
HLA-DOA-206ENST00000495532 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
HLA-DOA-206ENST00000495532 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
HLA-DOA-206ENST00000495532 CHRNA5P30532 468 aa15.88■□□□□ 0.13
HLA-DOA-206ENST00000495532 DDR1Q08345 913 aa15.88■□□□□ 0.13
HLA-DOA-206ENST00000495532 EMILIN1Q9Y6C2 1016 aa15.88■□□□□ 0.13
HLA-DOA-206ENST00000495532 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
HLA-DOA-206ENST00000495532 RASSF7Q02833 373 aa15.87■□□□□ 0.13
HLA-DOA-206ENST00000495532 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
HLA-DOA-206ENST00000495532 GLTPD2A6NH11 291 aa15.86■□□□□ 0.13
HLA-DOA-206ENST00000495532 VEGFAP15692 232 aaPredicted RBP15.86■□□□□ 0.13
HLA-DOA-206ENST00000495532 AFDNP55196 1824 aaKnown RBP15.85■□□□□ 0.13
HLA-DOA-206ENST00000495532 FKBP8Q14318 412 aa15.85■□□□□ 0.13
HLA-DOA-206ENST00000495532 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
HLA-DOA-206ENST00000495532 TJP1Q07157 1748 aa15.85■□□□□ 0.13
HLA-DOA-206ENST00000495532 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
HLA-DOA-206ENST00000495532 EYA1Q99502 592 aa15.84■□□□□ 0.13
HLA-DOA-206ENST00000495532 SRP68Q9UHB9 627 aaKnown RBP15.84■□□□□ 0.13
HLA-DOA-206ENST00000495532 USP42Q9H9J4 1324 aaKnown RBP15.84■□□□□ 0.13
HLA-DOA-206ENST00000495532 NRXN2Q9P2S2 1712 aa15.83■□□□□ 0.13
HLA-DOA-206ENST00000495532 LMNB1P20700 586 aa15.83■□□□□ 0.12
HLA-DOA-206ENST00000495532 POTECB2RU33 542 aa15.82■□□□□ 0.12
HLA-DOA-206ENST00000495532 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
HLA-DOA-206ENST00000495532 DICER1Q9UPY3 1922 aaKnown RBP15.82■□□□□ 0.12
HLA-DOA-206ENST00000495532 ERVV-2B6SEH9 535 aa15.81■□□□□ 0.12
HLA-DOA-206ENST00000495532 FOXN1O15353 648 aa15.81■□□□□ 0.12
HLA-DOA-206ENST00000495532 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
HLA-DOA-206ENST00000495532 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
HLA-DOA-206ENST00000495532 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
HLA-DOA-206ENST00000495532 MKRN1Q9UHC7 482 aaKnown RBP15.8■□□□□ 0.12
HLA-DOA-206ENST00000495532 PPM1GO15355 546 aaPredicted RBP15.79■□□□□ 0.12
HLA-DOA-206ENST00000495532 SLC24A1O60721 1099 aa15.79■□□□□ 0.12
HLA-DOA-206ENST00000495532 TM4SF1P30408 202 aa15.79■□□□□ 0.12
HLA-DOA-206ENST00000495532 PRDM10Q9NQV6 1147 aa15.79■□□□□ 0.12
HLA-DOA-206ENST00000495532 VIRMAQ69YN4 1812 aaKnown RBP15.78■□□□□ 0.12
HLA-DOA-206ENST00000495532 NFKBIEO00221 500 aa15.77■□□□□ 0.12
HLA-DOA-206ENST00000495532 FER1L6Q2WGJ9 1857 aa15.77■□□□□ 0.11
HLA-DOA-206ENST00000495532 CNTNAP1P78357 1384 aa15.76■□□□□ 0.11
HLA-DOA-206ENST00000495532 CARD14Q9BXL6 1004 aa15.76■□□□□ 0.11
HLA-DOA-206ENST00000495532 PTCD1O75127 700 aaKnown RBP15.75■□□□□ 0.11
HLA-DOA-206ENST00000495532 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
HLA-DOA-206ENST00000495532 POTEIP0CG38 1075 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms