RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 ZNF831Q5JPB2 1677 aa24.68■■□□□ 1.54
YIPF4-204ENST00000495355 AK7Q96M32 723 aa24.67■■□□□ 1.54
YIPF4-204ENST00000495355 FLAD1Q8NFF5 587 aa24.66■■□□□ 1.54
YIPF4-204ENST00000495355 COL5A3P25940 1745 aaPredicted RBP24.66■■□□□ 1.54
YIPF4-204ENST00000495355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.65■■□□□ 1.54
YIPF4-204ENST00000495355 PHF14O94880 888 aa24.65■■□□□ 1.54
YIPF4-204ENST00000495355 PLEKHO1Q53GL0 409 aaPredicted RBP24.65■■□□□ 1.54
YIPF4-204ENST00000495355 ZNF530Q6P9A1 599 aaPredicted RBP24.65■■□□□ 1.54
YIPF4-204ENST00000495355 DCAF5Q96JK2 942 aa24.65■■□□□ 1.54
YIPF4-204ENST00000495355 ERVV-2B6SEH9 535 aa24.64■■□□□ 1.54
YIPF4-204ENST00000495355 SULT6B1Q6IMI4 303 aa24.64■■□□□ 1.54
YIPF4-204ENST00000495355 SSFA2P28290 1259 aa24.63■■□□□ 1.53
YIPF4-204ENST00000495355 ATP6V1AP38606 617 aa24.63■■□□□ 1.53
YIPF4-204ENST00000495355 ZNF784Q8NCA9 323 aaPredicted RBP24.63■■□□□ 1.53
YIPF4-204ENST00000495355 YBX3P16989 372 aaKnown RBP eCLIP24.62■■□□□ 1.532e-7■□□□□ 10.9
YIPF4-204ENST00000495355 GPR162Q16538 588 aa24.62■■□□□ 1.53
YIPF4-204ENST00000495355 AMOTQ4VCS5 1084 aa24.62■■□□□ 1.53
YIPF4-204ENST00000495355 HMGB2P26583 209 aaKnown RBP24.61■■□□□ 1.53
YIPF4-204ENST00000495355 SCN11AQ9UI33 1791 aa24.61■■□□□ 1.53
YIPF4-204ENST00000495355 GNPATO15228 680 aa24.6■■□□□ 1.53
YIPF4-204ENST00000495355 HSP90AB1P08238 724 aaKnown RBP24.6■■□□□ 1.53
YIPF4-204ENST00000495355 MTHFSP49914 203 aa24.6■■□□□ 1.53
YIPF4-204ENST00000495355 MYH14Q7Z406 1995 aaKnown RBP24.59■■□□□ 1.53
YIPF4-204ENST00000495355 COL3A1P02461 1466 aaPredicted RBP24.58■■□□□ 1.53
YIPF4-204ENST00000495355 TJP1Q07157 1748 aa24.58■■□□□ 1.52
YIPF4-204ENST00000495355 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
YIPF4-204ENST00000495355 CC2D1BQ5T0F9 858 aaKnown RBP24.57■■□□□ 1.52
YIPF4-204ENST00000495355 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
YIPF4-204ENST00000495355 CD2APQ9Y5K6 639 aa24.57■■□□□ 1.52
YIPF4-204ENST00000495355 CABP4P57796 275 aa24.56■■□□□ 1.52
YIPF4-204ENST00000495355 RBM42Q9BTD8 480 aaKnown RBP24.56■■□□□ 1.52
YIPF4-204ENST00000495355 VIRMAQ69YN4 1812 aaKnown RBP24.55■■□□□ 1.52
YIPF4-204ENST00000495355 ADAMTS7Q9UKP4 1686 aa24.55■■□□□ 1.52
YIPF4-204ENST00000495355 C4AP0C0L4 1744 aa24.55■■□□□ 1.52
YIPF4-204ENST00000495355 NPC1L1Q9UHC9 1359 aa24.54■■□□□ 1.52
YIPF4-204ENST00000495355 MRC1P22897 1456 aa24.54■■□□□ 1.52
YIPF4-204ENST00000495355 C1orf141Q5JVX7 400 aa24.54■■□□□ 1.52
YIPF4-204ENST00000495355 NFATC2IPQ8NCF5 419 aa24.54■■□□□ 1.52
YIPF4-204ENST00000495355 KIAA1551Q9HCM1 1747 aa24.53■■□□□ 1.52
YIPF4-204ENST00000495355 HMOX1P09601 288 aa24.53■■□□□ 1.52
YIPF4-204ENST00000495355 CNTNAP4Q9C0A0 1308 aa24.53■■□□□ 1.52
YIPF4-204ENST00000495355 RC3H1Q5TC82 1133 aaKnown RBP24.51■■□□□ 1.51
YIPF4-204ENST00000495355 KIF13BQ9NQT8 1826 aa24.5■■□□□ 1.51
YIPF4-204ENST00000495355 PTCD1O75127 700 aaKnown RBP24.5■■□□□ 1.51
YIPF4-204ENST00000495355 AKAP4Q5JQC9 854 aa24.5■■□□□ 1.51
YIPF4-204ENST00000495355 LGR6Q9HBX8 967 aa24.5■■□□□ 1.51
YIPF4-204ENST00000495355 ARHGEF1Q92888 912 aaKnown RBP24.49■■□□□ 1.51
YIPF4-204ENST00000495355 RTCBQ9Y3I0 505 aaKnown RBP24.49■■□□□ 1.51
YIPF4-204ENST00000495355 DIAPH1O60610 1272 aaKnown RBP24.48■■□□□ 1.51
YIPF4-204ENST00000495355 RPS6KA4O75676 772 aa24.48■■□□□ 1.51
YIPF4-204ENST00000495355 MTHFSDQ2M296 383 aaKnown RBP24.47■■□□□ 1.51
YIPF4-204ENST00000495355 KCPQ6ZWJ8 1503 aa24.46■■□□□ 1.51
YIPF4-204ENST00000495355 MMP10P09238 476 aa24.46■■□□□ 1.51
YIPF4-204ENST00000495355 TRAPPC3LQ5T215 181 aa24.46■■□□□ 1.51
YIPF4-204ENST00000495355 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
YIPF4-204ENST00000495355 RNMTO43148 476 aaKnown RBP24.45■■□□□ 1.5
YIPF4-204ENST00000495355 GRIN3BO60391 1043 aa24.45■■□□□ 1.5
YIPF4-204ENST00000495355 GYS1P13807 737 aa24.45■■□□□ 1.5
YIPF4-204ENST00000495355 CNGB1Q14028 1251 aaPredicted RBP24.45■■□□□ 1.5
YIPF4-204ENST00000495355 CRKLP46109 303 aaKnown RBP24.44■■□□□ 1.5
YIPF4-204ENST00000495355 WWC3Q9ULE0 1092 aa24.44■■□□□ 1.5
YIPF4-204ENST00000495355 PXDNLA1KZ92 1463 aa24.44■■□□□ 1.5
YIPF4-204ENST00000495355 C10orf71Q711Q0 1435 aa24.43■■□□□ 1.5
YIPF4-204ENST00000495355 N4BP2Q86UW6 1770 aaPredicted RBP24.42■■□□□ 1.5
YIPF4-204ENST00000495355 UBR2Q8IWV8 1755 aa24.42■■□□□ 1.5
YIPF4-204ENST00000495355 SLC39A6Q13433 755 aa24.42■■□□□ 1.5
YIPF4-204ENST00000495355 INTS5Q6P9B9 1019 aaKnown RBP24.42■■□□□ 1.5
YIPF4-204ENST00000495355 DNAJC10Q8IXB1 793 aa24.4■■□□□ 1.5
YIPF4-204ENST00000495355 NLGN1Q8N2Q7 840 aa24.4■■□□□ 1.5
YIPF4-204ENST00000495355 SRP68Q9UHB9 627 aaKnown RBP24.4■■□□□ 1.5
YIPF4-204ENST00000495355 ADCY9O60503 1353 aa24.39■■□□□ 1.49
YIPF4-204ENST00000495355 SIPA1L3O60292 1781 aaPredicted RBP24.39■■□□□ 1.49
YIPF4-204ENST00000495355 RFC4P35249 363 aa24.38■■□□□ 1.49
YIPF4-204ENST00000495355 USP42Q9H9J4 1324 aaKnown RBP24.37■■□□□ 1.49
YIPF4-204ENST00000495355 BRCA1P38398 1863 aaKnown RBP24.37■■□□□ 1.49
YIPF4-204ENST00000495355 FKBP8Q14318 412 aa24.36■■□□□ 1.49
YIPF4-204ENST00000495355 ATP10DQ9P241 1426 aa24.35■■□□□ 1.49
YIPF4-204ENST00000495355 U2SURPO15042 1029 aaKnown RBP24.35■■□□□ 1.49
YIPF4-204ENST00000495355 CYP19A1P11511 503 aaPredicted RBP24.35■■□□□ 1.49
YIPF4-204ENST00000495355 SOS1Q07889 1333 aaPredicted RBP24.35■■□□□ 1.49
YIPF4-204ENST00000495355 DDR1Q08345 913 aa24.34■■□□□ 1.49
YIPF4-204ENST00000495355 IL17REQ8NFR9 667 aa24.34■■□□□ 1.49
YIPF4-204ENST00000495355 C1QTNF8P60827 252 aa24.33■■□□□ 1.49
YIPF4-204ENST00000495355 CCDC87Q9NVE4 849 aa24.33■■□□□ 1.49
YIPF4-204ENST00000495355 A0A0G2JLW4 131 aa24.31■■□□□ 1.48
YIPF4-204ENST00000495355 TGFB2P61812 414 aa24.31■■□□□ 1.48
YIPF4-204ENST00000495355 PHACTR3Q96KR7 559 aa24.31■■□□□ 1.48
YIPF4-204ENST00000495355 RSPH6AQ9H0K4 717 aa24.31■■□□□ 1.48
YIPF4-204ENST00000495355 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
YIPF4-204ENST00000495355 PARP3Q9Y6F1 533 aa24.3■■□□□ 1.48
YIPF4-204ENST00000495355 CEMIPQ8WUJ3 1361 aa24.29■■□□□ 1.48
YIPF4-204ENST00000495355 DPEP1P16444 411 aa24.29■■□□□ 1.48
YIPF4-204ENST00000495355 KCNA3P22001 575 aa24.29■■□□□ 1.48
YIPF4-204ENST00000495355 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
YIPF4-204ENST00000495355 TM4SF1P30408 202 aa24.28■■□□□ 1.48
YIPF4-204ENST00000495355 VSIG10Q8N0Z9 540 aa24.28■■□□□ 1.48
YIPF4-204ENST00000495355 GAS2L2Q8NHY3 880 aa24.28■■□□□ 1.48
YIPF4-204ENST00000495355 BCL2L12Q9HB09 334 aa24.28■■□□□ 1.48
YIPF4-204ENST00000495355 COL15A1P39059 1388 aa24.28■■□□□ 1.48
YIPF4-204ENST00000495355 GNAT3A8MTJ3 354 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms