RNA–Protein interactions for RNA: ENST00000495221.1

PDE1C-211, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-211ENST00000495221 SULT6B1Q6IMI4 303 aa29.42■■■□□ 2.3
PDE1C-211ENST00000495221 ATG3Q9NT62 314 aa29.41■■■□□ 2.3
PDE1C-211ENST00000495221 MTHFSP49914 203 aa29.4■■■□□ 2.3
PDE1C-211ENST00000495221 C1orf141Q5JVX7 400 aa29.39■■■□□ 2.3
PDE1C-211ENST00000495221 UTRNP46939 3433 aa29.38■■■□□ 2.29
PDE1C-211ENST00000495221 SSFA2P28290 1259 aa29.38■■■□□ 2.29
PDE1C-211ENST00000495221 LINC00116Q8NCU8 138 aa29.38■■■□□ 2.29
PDE1C-211ENST00000495221 ATP6V1AP38606 617 aa29.37■■■□□ 2.29
PDE1C-211ENST00000495221 CICQ96RK0 1608 aaPredicted RBP29.36■■■□□ 2.29
PDE1C-211ENST00000495221 ITPK1Q13572 414 aa29.36■■■□□ 2.29
PDE1C-211ENST00000495221 CC2D1BQ5T0F9 858 aaKnown RBP29.36■■■□□ 2.29
PDE1C-211ENST00000495221 KLHL34Q8N239 644 aa29.36■■■□□ 2.29
PDE1C-211ENST00000495221 MSL1Q68DK7 614 aa29.35■■■□□ 2.29
PDE1C-211ENST00000495221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.34■■■□□ 2.29
PDE1C-211ENST00000495221 CABP4P57796 275 aa29.33■■■□□ 2.29
PDE1C-211ENST00000495221 AMIGO3Q86WK7 504 aa29.33■■■□□ 2.29
PDE1C-211ENST00000495221 ADAMTS7Q9UKP4 1686 aa29.31■■■□□ 2.28
PDE1C-211ENST00000495221 COL3A1P02461 1466 aaPredicted RBP29.31■■■□□ 2.28
PDE1C-211ENST00000495221 PHF14O94880 888 aa29.31■■■□□ 2.28
PDE1C-211ENST00000495221 MYH14Q7Z406 1995 aaKnown RBP29.31■■■□□ 2.28
PDE1C-211ENST00000495221 GNPATO15228 680 aa29.3■■■□□ 2.28
PDE1C-211ENST00000495221 DIAPH1O60610 1272 aaKnown RBP29.3■■■□□ 2.28
PDE1C-211ENST00000495221 MRC1P22897 1456 aa29.29■■■□□ 2.28
PDE1C-211ENST00000495221 AKAP4Q5JQC9 854 aa29.29■■■□□ 2.28
PDE1C-211ENST00000495221 NLGN2Q8NFZ4 835 aa29.29■■■□□ 2.28
PDE1C-211ENST00000495221 TJP1Q07157 1748 aa29.28■■■□□ 2.28
PDE1C-211ENST00000495221 GPR162Q16538 588 aa29.28■■■□□ 2.28
PDE1C-211ENST00000495221 SLC4A9Q96Q91 983 aa29.28■■■□□ 2.28
PDE1C-211ENST00000495221 RBM42Q9BTD8 480 aaKnown RBP29.28■■■□□ 2.28
PDE1C-211ENST00000495221 C4AP0C0L4 1744 aa29.27■■■□□ 2.28
PDE1C-211ENST00000495221 CNTNAP4Q9C0A0 1308 aa29.26■■■□□ 2.27
PDE1C-211ENST00000495221 RC3H1Q5TC82 1133 aaKnown RBP29.26■■■□□ 2.27
PDE1C-211ENST00000495221 CD2APQ9Y5K6 639 aa29.26■■■□□ 2.27
PDE1C-211ENST00000495221 HMOX1P09601 288 aa29.25■■■□□ 2.27
PDE1C-211ENST00000495221 NFATC2IPQ8NCF5 419 aa29.25■■■□□ 2.27
PDE1C-211ENST00000495221 SMIM5Q71RC9 77 aa29.24■■■□□ 2.27
PDE1C-211ENST00000495221 RTCBQ9Y3I0 505 aaKnown RBP29.24■■■□□ 2.27
PDE1C-211ENST00000495221 KIF13BQ9NQT8 1826 aa29.22■■■□□ 2.27
PDE1C-211ENST00000495221 ADRA2BP18089 450 aa29.22■■■□□ 2.27
PDE1C-211ENST00000495221 GOLGB1Q14789 3259 aaKnown RBP29.21■■■□□ 2.27
PDE1C-211ENST00000495221 SLC52A2Q9HAB3 445 aa29.2■■■□□ 2.26
PDE1C-211ENST00000495221 UBR2Q8IWV8 1755 aa29.19■■■□□ 2.26
PDE1C-211ENST00000495221 TRAPPC3LQ5T215 181 aa29.19■■■□□ 2.26
PDE1C-211ENST00000495221 PELP1Q8IZL8 1130 aaKnown RBP29.19■■■□□ 2.26
PDE1C-211ENST00000495221 PTCD1O75127 700 aaKnown RBP29.18■■■□□ 2.26
PDE1C-211ENST00000495221 MTHFSDQ2M296 383 aaKnown RBP29.18■■■□□ 2.26
PDE1C-211ENST00000495221 RNMTO43148 476 aaKnown RBP29.17■■■□□ 2.26
PDE1C-211ENST00000495221 RPS6KA4O75676 772 aa29.17■■■□□ 2.26
PDE1C-211ENST00000495221 GRIN3BO60391 1043 aa29.16■■■□□ 2.26
PDE1C-211ENST00000495221 SIPA1L3O60292 1781 aaPredicted RBP29.16■■■□□ 2.26
PDE1C-211ENST00000495221 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
PDE1C-211ENST00000495221 ZNF784Q8NCA9 323 aaPredicted RBP29.15■■■□□ 2.26
PDE1C-211ENST00000495221 LGR6Q9HBX8 967 aa29.15■■■□□ 2.26
PDE1C-211ENST00000495221 KCPQ6ZWJ8 1503 aa29.14■■■□□ 2.25
PDE1C-211ENST00000495221 U2SURPO15042 1029 aaKnown RBP29.13■■■□□ 2.25
PDE1C-211ENST00000495221 YBX3P16989 372 aaKnown RBP eCLIP29.13■■■□□ 2.25
PDE1C-211ENST00000495221 NLGN1Q8N2Q7 840 aa29.13■■■□□ 2.25
PDE1C-211ENST00000495221 ARHGEF1Q92888 912 aaKnown RBP29.13■■■□□ 2.25
PDE1C-211ENST00000495221 CFAP53Q96M91 514 aa29.13■■■□□ 2.25
PDE1C-211ENST00000495221 KIAA1551Q9HCM1 1747 aa29.12■■■□□ 2.25
PDE1C-211ENST00000495221 CRKLP46109 303 aaKnown RBP29.12■■■□□ 2.25
PDE1C-211ENST00000495221 RFC4P35249 363 aa29.11■■■□□ 2.25
PDE1C-211ENST00000495221 MMP10P09238 476 aa29.1■■■□□ 2.25
PDE1C-211ENST00000495221 GAS2L2Q8NHY3 880 aa29.1■■■□□ 2.25
PDE1C-211ENST00000495221 GYS1P13807 737 aa29.08■■■□□ 2.25
PDE1C-211ENST00000495221 N4BP2Q86UW6 1770 aaPredicted RBP29.07■■■□□ 2.24
PDE1C-211ENST00000495221 C10orf71Q711Q0 1435 aa29.06■■■□□ 2.24
PDE1C-211ENST00000495221 BRCA1P38398 1863 aaKnown RBP29.06■■■□□ 2.24
PDE1C-211ENST00000495221 GNAT3A8MTJ3 354 aa29.05■■■□□ 2.24
PDE1C-211ENST00000495221 PPP2R1AP30153 589 aa29.05■■■□□ 2.24
PDE1C-211ENST00000495221 SLC39A6Q13433 755 aa29.05■■■□□ 2.24
PDE1C-211ENST00000495221 VSIG10Q8N0Z9 540 aa29.05■■■□□ 2.24
PDE1C-211ENST00000495221 NUDCQ9Y266 331 aa29.05■■■□□ 2.24
PDE1C-211ENST00000495221 INTS5Q6P9B9 1019 aaKnown RBP29.04■■■□□ 2.24
PDE1C-211ENST00000495221 DNAJC10Q8IXB1 793 aa29.04■■■□□ 2.24
PDE1C-211ENST00000495221 USP42Q9H9J4 1324 aaKnown RBP29.03■■■□□ 2.24
PDE1C-211ENST00000495221 CCDC87Q9NVE4 849 aa29.03■■■□□ 2.24
PDE1C-211ENST00000495221 RSPH6AQ9H0K4 717 aa29.02■■■□□ 2.24
PDE1C-211ENST00000495221 PXDNLA1KZ92 1463 aa29.02■■■□□ 2.24
PDE1C-211ENST00000495221 SOS1Q07889 1333 aaPredicted RBP29■■■□□ 2.23
PDE1C-211ENST00000495221 CYP19A1P11511 503 aaPredicted RBP29■■■□□ 2.23
PDE1C-211ENST00000495221 PRKAR2BP31323 418 aa29■■■□□ 2.23
PDE1C-211ENST00000495221 TGFB2P61812 414 aa29■■■□□ 2.23
PDE1C-211ENST00000495221 TEFQ10587 303 aa29■■■□□ 2.23
PDE1C-211ENST00000495221 PARP3Q9Y6F1 533 aa29■■■□□ 2.23
PDE1C-211ENST00000495221 CEMIPQ8WUJ3 1361 aa29■■■□□ 2.23
PDE1C-211ENST00000495221 TTC5Q8N0Z6 440 aa28.99■■■□□ 2.23
PDE1C-211ENST00000495221 IL17REQ8NFR9 667 aa28.99■■■□□ 2.23
PDE1C-211ENST00000495221 SRP68Q9UHB9 627 aaKnown RBP28.97■■■□□ 2.23
PDE1C-211ENST00000495221 ARFGEF1Q9Y6D6 1849 aa28.97■■■□□ 2.23
PDE1C-211ENST00000495221 PHACTR3Q96KR7 559 aa28.96■■■□□ 2.23
PDE1C-211ENST00000495221 COL15A1P39059 1388 aa28.96■■■□□ 2.23
PDE1C-211ENST00000495221 AFDNP55196 1824 aaKnown RBP28.96■■■□□ 2.23
PDE1C-211ENST00000495221 FCHSD2O94868 740 aa28.94■■■□□ 2.22
PDE1C-211ENST00000495221 U2AF1L5P0DN76 240 aaPredicted RBP28.94■■■□□ 2.22
PDE1C-211ENST00000495221 U2AF1Q01081 240 aaKnown RBP eCLIP28.94■■■□□ 2.22
PDE1C-211ENST00000495221 FKBP8Q14318 412 aa28.94■■■□□ 2.22
PDE1C-211ENST00000495221 ZNF790Q6PG37 636 aa28.94■■■□□ 2.22
PDE1C-211ENST00000495221 ZBTB1Q9Y2K1 713 aa28.94■■■□□ 2.22
PDE1C-211ENST00000495221 NRXN2Q9P2S2 1712 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms