RNA–Protein interactions for RNA: ENST00000495099.2

HDAC11-219, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 198 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-219ENST00000495099 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
HDAC11-219ENST00000495099 C4BP0C0L5 1744 aa16.87■□□□□ 0.29
HDAC11-219ENST00000495099 HOXC9P31274 260 aa16.87■□□□□ 0.29
HDAC11-219ENST00000495099 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
HDAC11-219ENST00000495099 FYB1O15117 783 aa16.85■□□□□ 0.29
HDAC11-219ENST00000495099 USHBP1Q8N6Y0 703 aa16.85■□□□□ 0.29
HDAC11-219ENST00000495099 DPEP1P16444 411 aa16.83■□□□□ 0.28
HDAC11-219ENST00000495099 CCDC88AQ3V6T2 1871 aa16.83■□□□□ 0.28
HDAC11-219ENST00000495099 AK7Q96M32 723 aa16.83■□□□□ 0.28
HDAC11-219ENST00000495099 KIF20BQ96Q89 1820 aa16.83■□□□□ 0.28
HDAC11-219ENST00000495099 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
HDAC11-219ENST00000495099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
HDAC11-219ENST00000495099 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
HDAC11-219ENST00000495099 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
HDAC11-219ENST00000495099 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
HDAC11-219ENST00000495099 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
HDAC11-219ENST00000495099 TGFB2P61812 414 aa16.81■□□□□ 0.28
HDAC11-219ENST00000495099 MMP10P09238 476 aa16.8■□□□□ 0.28
HDAC11-219ENST00000495099 HSPA8P11142 646 aaKnown RBP16.8■□□□□ 0.28
HDAC11-219ENST00000495099 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
HDAC11-219ENST00000495099 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
HDAC11-219ENST00000495099 MEGF6O75095 1541 aa16.8■□□□□ 0.28
HDAC11-219ENST00000495099 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
HDAC11-219ENST00000495099 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
HDAC11-219ENST00000495099 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
HDAC11-219ENST00000495099 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
HDAC11-219ENST00000495099 WBP1LQ9NX94 342 aa16.78■□□□□ 0.28
HDAC11-219ENST00000495099 TIAM2Q8IVF5 1701 aa16.77■□□□□ 0.28
HDAC11-219ENST00000495099 VEGFBP49765 207 aa16.77■□□□□ 0.28
HDAC11-219ENST00000495099 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
HDAC11-219ENST00000495099 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
HDAC11-219ENST00000495099 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
HDAC11-219ENST00000495099 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
HDAC11-219ENST00000495099 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
HDAC11-219ENST00000495099 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
HDAC11-219ENST00000495099 RAPGEF4Q8WZA2 1011 aa16.74■□□□□ 0.27
HDAC11-219ENST00000495099 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
HDAC11-219ENST00000495099 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
HDAC11-219ENST00000495099 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
HDAC11-219ENST00000495099 TATP17735 454 aaPredicted RBP16.73■□□□□ 0.27
HDAC11-219ENST00000495099 RASSF7Q02833 373 aa16.73■□□□□ 0.27
HDAC11-219ENST00000495099 DCAF5Q96JK2 942 aa16.73■□□□□ 0.27
HDAC11-219ENST00000495099 KCNA3P22001 575 aa16.72■□□□□ 0.27
HDAC11-219ENST00000495099 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
HDAC11-219ENST00000495099 ITGB4P16144 1822 aa16.71■□□□□ 0.27
HDAC11-219ENST00000495099 SSFA2P28290 1259 aa16.71■□□□□ 0.27
HDAC11-219ENST00000495099 TNNT2P45379 298 aaPredicted RBP16.71■□□□□ 0.27
HDAC11-219ENST00000495099 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
HDAC11-219ENST00000495099 INSRP06213 1382 aa16.71■□□□□ 0.27
HDAC11-219ENST00000495099 FLT4P35916 1363 aa16.71■□□□□ 0.27
HDAC11-219ENST00000495099 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
HDAC11-219ENST00000495099 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
HDAC11-219ENST00000495099 POTECB2RU33 542 aa16.69■□□□□ 0.26
HDAC11-219ENST00000495099 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
HDAC11-219ENST00000495099 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
HDAC11-219ENST00000495099 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
HDAC11-219ENST00000495099 CHADLQ6NUI6 762 aa16.68■□□□□ 0.26
HDAC11-219ENST00000495099 MPRIPQ6WCQ1 1025 aa16.68■□□□□ 0.26
HDAC11-219ENST00000495099 GNPATO15228 680 aa16.67■□□□□ 0.26
HDAC11-219ENST00000495099 CYP27B1O15528 508 aa16.67■□□□□ 0.26
HDAC11-219ENST00000495099 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
HDAC11-219ENST00000495099 CCER1Q8TC90 406 aaPredicted RBP16.67■□□□□ 0.26
HDAC11-219ENST00000495099 CASP8AP2Q9UKL3 1982 aa16.67■□□□□ 0.26
HDAC11-219ENST00000495099 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
HDAC11-219ENST00000495099 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
HDAC11-219ENST00000495099 CGNL1Q0VF96 1302 aa16.66■□□□□ 0.26
HDAC11-219ENST00000495099 PCDH11XQ9BZA7 1347 aa16.65■□□□□ 0.26
HDAC11-219ENST00000495099 PCDH11YQ9BZA8 1340 aa16.65■□□□□ 0.26
HDAC11-219ENST00000495099 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
HDAC11-219ENST00000495099 ZC3H4Q9UPT8 1303 aaKnown RBP16.65■□□□□ 0.26
HDAC11-219ENST00000495099 MCOLN1Q9GZU1 580 aa16.64■□□□□ 0.25
HDAC11-219ENST00000495099 CHRNA5P30532 468 aa16.63■□□□□ 0.25
HDAC11-219ENST00000495099 EIF4G2P78344 907 aaKnown RBP eCLIP16.63■□□□□ 0.25
HDAC11-219ENST00000495099 PRPF38BQ5VTL8 546 aaKnown RBP16.63■□□□□ 0.25
HDAC11-219ENST00000495099 EYA1Q99502 592 aa16.63■□□□□ 0.25
HDAC11-219ENST00000495099 POLKQ9UBT6 870 aa16.63■□□□□ 0.25
HDAC11-219ENST00000495099 TSKSQ9UJT2 592 aa16.63■□□□□ 0.25
HDAC11-219ENST00000495099 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
HDAC11-219ENST00000495099 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
HDAC11-219ENST00000495099 LMNB1P20700 586 aa16.62■□□□□ 0.25
HDAC11-219ENST00000495099 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
HDAC11-219ENST00000495099 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
HDAC11-219ENST00000495099 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
HDAC11-219ENST00000495099 TMEM88BA6NKF7 163 aa16.61■□□□□ 0.25
HDAC11-219ENST00000495099 PANK3Q9H999 370 aa16.61■□□□□ 0.25
HDAC11-219ENST00000495099 WASHC2AQ641Q2 1341 aa16.61■□□□□ 0.25
HDAC11-219ENST00000495099 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
HDAC11-219ENST00000495099 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
HDAC11-219ENST00000495099 PIGBQ92521 554 aa16.59■□□□□ 0.25
HDAC11-219ENST00000495099 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
HDAC11-219ENST00000495099 PASKQ96RG2 1323 aa16.59■□□□□ 0.25
HDAC11-219ENST00000495099 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
HDAC11-219ENST00000495099 SOX10P56693 466 aa16.58■□□□□ 0.24
HDAC11-219ENST00000495099 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
HDAC11-219ENST00000495099 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.24
HDAC11-219ENST00000495099 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
HDAC11-219ENST00000495099 DICER1Q9UPY3 1922 aaKnown RBP16.58■□□□□ 0.24
HDAC11-219ENST00000495099 BEGAINQ9BUH8 593 aa16.57■□□□□ 0.24
HDAC11-219ENST00000495099 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
HDAC11-219ENST00000495099 LOC102724428A0A0B4J2F2 783 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms