RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	PPP2R1A	P30153	589 aa		13.84	□□□□□ -0.19
NEPRO-222	ENST00000494891	COL23A1	Q86Y22	540 aa	Predicted RBP	13.84	□□□□□ -0.19
NEPRO-222	ENST00000494891	CFAP53	Q96M91	514 aa		13.84	□□□□□ -0.19
NEPRO-222	ENST00000494891	ARX	Q96QS3	562 aa		13.84	□□□□□ -0.19
NEPRO-222	ENST00000494891	HMOX1	P09601	288 aa		13.83	□□□□□ -0.2
NEPRO-222	ENST00000494891	CABP4	P57796	275 aa		13.83	□□□□□ -0.2
NEPRO-222	ENST00000494891	COL5A3	P25940	1745 aa	Predicted RBP	13.83	□□□□□ -0.2
NEPRO-222	ENST00000494891	VIRMA	Q69YN4	1812 aa	Known RBP	13.83	□□□□□ -0.2
NEPRO-222	ENST00000494891	ATP6V1A	P38606	617 aa		13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	ITPK1	Q13572	414 aa		13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	MTHFSD	Q2M296	383 aa	Known RBP	13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	RC3H1	Q5TC82	1133 aa	Known RBP	13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	NFATC2IP	Q8NCF5	419 aa		13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	LINC00116	Q8NCU8	138 aa		13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	SLC4A9	Q96Q91	983 aa		13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	SYT17	Q9BSW7	474 aa		13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	SLC52A2	Q9HAB3	445 aa		13.82	□□□□□ -0.2
NEPRO-222	ENST00000494891	RNMT	O43148	476 aa	Known RBP	13.81	□□□□□ -0.2
NEPRO-222	ENST00000494891	POLD1	P28340	1107 aa		13.81	□□□□□ -0.2
NEPRO-222	ENST00000494891	GAS2L2	Q8NHY3	880 aa		13.81	□□□□□ -0.2
NEPRO-222	ENST00000494891	AK7	Q96M32	723 aa		13.81	□□□□□ -0.2
NEPRO-222	ENST00000494891	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.81	□□□□□ -0.2
NEPRO-222	ENST00000494891	NUDC	Q9Y266	331 aa		13.81	□□□□□ -0.2
NEPRO-222	ENST00000494891	CNTNAP4	Q9C0A0	1308 aa		13.81	□□□□□ -0.2
NEPRO-222	ENST00000494891	RSPH6A	Q9H0K4	717 aa		13.8	□□□□□ -0.2
NEPRO-222	ENST00000494891	U2SURP	O15042	1029 aa	Known RBP	13.79	□□□□□ -0.2
NEPRO-222	ENST00000494891	FCHSD2	O94868	740 aa		13.79	□□□□□ -0.2
NEPRO-222	ENST00000494891	ADRA2B	P18089	450 aa		13.79	□□□□□ -0.2
NEPRO-222	ENST00000494891	AMIGO3	Q86WK7	504 aa		13.79	□□□□□ -0.2
NEPRO-222	ENST00000494891	LGR6	Q9HBX8	967 aa		13.79	□□□□□ -0.2
NEPRO-222	ENST00000494891	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.78	□□□□□ -0.2
NEPRO-222	ENST00000494891	CEMIP	Q8WUJ3	1361 aa		13.78	□□□□□ -0.2
NEPRO-222	ENST00000494891	MYH14	Q7Z406	1995 aa	Known RBP	13.78	□□□□□ -0.2
NEPRO-222	ENST00000494891	GNAT3	A8MTJ3	354 aa		13.77	□□□□□ -0.21
NEPRO-222	ENST00000494891	SIPA1L3	O60292	1781 aa	Predicted RBP	13.77	□□□□□ -0.21
NEPRO-222	ENST00000494891	TJP1	Q07157	1748 aa		13.77	□□□□□ -0.21
NEPRO-222	ENST00000494891	UBR2	Q8IWV8	1755 aa		13.77	□□□□□ -0.21
NEPRO-222	ENST00000494891	RBM42	Q9BTD8	480 aa	Known RBP	13.77	□□□□□ -0.21
NEPRO-222	ENST00000494891	KCP	Q6ZWJ8	1503 aa		13.76	□□□□□ -0.21
NEPRO-222	ENST00000494891	DCAF8L1	A6NGE4	600 aa		13.76	□□□□□ -0.21
NEPRO-222	ENST00000494891	GNPAT	O15228	680 aa		13.76	□□□□□ -0.21
NEPRO-222	ENST00000494891	RPS6KA4	O75676	772 aa		13.76	□□□□□ -0.21
NEPRO-222	ENST00000494891	RALBP1	Q15311	655 aa		13.76	□□□□□ -0.21
NEPRO-222	ENST00000494891	VSIG10	Q8N0Z9	540 aa		13.76	□□□□□ -0.21
NEPRO-222	ENST00000494891	MSH5	O43196	834 aa		13.75	□□□□□ -0.21
NEPRO-222	ENST00000494891	PRKAR2B	P31323	418 aa		13.75	□□□□□ -0.21
NEPRO-222	ENST00000494891	CNGB1	Q14028	1251 aa	Predicted RBP	13.75	□□□□□ -0.21
NEPRO-222	ENST00000494891	IL17RE	Q8NFR9	667 aa		13.75	□□□□□ -0.21
NEPRO-222	ENST00000494891	PHACTR3	Q96KR7	559 aa		13.75	□□□□□ -0.21
NEPRO-222	ENST00000494891	RTCB	Q9Y3I0	505 aa	Known RBP	13.75	□□□□□ -0.21
NEPRO-222	ENST00000494891	HTATSF1	O43719	755 aa	Known RBP	13.74	□□□□□ -0.21
NEPRO-222	ENST00000494891	PTCD1	O75127	700 aa	Known RBP	13.74	□□□□□ -0.21
NEPRO-222	ENST00000494891	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.74	□□□□□ -0.21
NEPRO-222	ENST00000494891	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
NEPRO-222	ENST00000494891	CD2AP	Q9Y5K6	639 aa		13.74	□□□□□ -0.21
NEPRO-222	ENST00000494891	UTRN	P46939	3433 aa		13.74	□□□□□ -0.21
NEPRO-222	ENST00000494891	ZEB1	P37275	1124 aa	Predicted RBP	13.73	□□□□□ -0.21
NEPRO-222	ENST00000494891	TRAPPC3L	Q5T215	181 aa		13.73	□□□□□ -0.21
NEPRO-222	ENST00000494891	PHF14	O94880	888 aa		13.72	□□□□□ -0.21
NEPRO-222	ENST00000494891	CRKL	P46109	303 aa	Known RBP	13.72	□□□□□ -0.21
NEPRO-222	ENST00000494891	NLGN1	Q8N2Q7	840 aa		13.72	□□□□□ -0.21
NEPRO-222	ENST00000494891	ARHGEF1	Q92888	912 aa	Known RBP	13.72	□□□□□ -0.21
NEPRO-222	ENST00000494891	GOLGB1	Q14789	3259 aa	Known RBP	13.71	□□□□□ -0.21
NEPRO-222	ENST00000494891	C4A	P0C0L4	1744 aa		13.71	□□□□□ -0.21
NEPRO-222	ENST00000494891	CYP19A1	P11511	503 aa	Predicted RBP	13.71	□□□□□ -0.21
NEPRO-222	ENST00000494891	TEF	Q10587	303 aa		13.71	□□□□□ -0.21
NEPRO-222	ENST00000494891	INTS5	Q6P9B9	1019 aa	Known RBP	13.71	□□□□□ -0.21
NEPRO-222	ENST00000494891	DDX10	Q13206	875 aa	Known RBP	13.7	□□□□□ -0.22
NEPRO-222	ENST00000494891	SLC39A6	Q13433	755 aa		13.7	□□□□□ -0.22
NEPRO-222	ENST00000494891	MSL1	Q68DK7	614 aa		13.7	□□□□□ -0.22
NEPRO-222	ENST00000494891	ZNF790	Q6PG37	636 aa		13.7	□□□□□ -0.22
NEPRO-222	ENST00000494891	PLEKHF1	Q96S99	279 aa		13.7	□□□□□ -0.22
NEPRO-222	ENST00000494891	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.7	□□□□□ -0.22
NEPRO-222	ENST00000494891	PNN	Q9H307	717 aa	Known RBP	13.7	□□□□□ -0.22
NEPRO-222	ENST00000494891	KIF13B	Q9NQT8	1826 aa		13.69	□□□□□ -0.22
NEPRO-222	ENST00000494891	GYS1	P13807	737 aa		13.69	□□□□□ -0.22
NEPRO-222	ENST00000494891	SMIM5	Q71RC9	77 aa		13.69	□□□□□ -0.22
NEPRO-222	ENST00000494891	DNAJC10	Q8IXB1	793 aa		13.69	□□□□□ -0.22
NEPRO-222	ENST00000494891	CCDC87	Q9NVE4	849 aa		13.69	□□□□□ -0.22
NEPRO-222	ENST00000494891	CHD4	Q14839	1912 aa		13.68	□□□□□ -0.22
NEPRO-222	ENST00000494891	SOS1	Q07889	1333 aa	Predicted RBP	13.68	□□□□□ -0.22
NEPRO-222	ENST00000494891	USP42	Q9H9J4	1324 aa	Known RBP	13.68	□□□□□ -0.22
NEPRO-222	ENST00000494891	RFC4	P35249	363 aa		13.68	□□□□□ -0.22
NEPRO-222	ENST00000494891	TTC5	Q8N0Z6	440 aa		13.68	□□□□□ -0.22
NEPRO-222	ENST00000494891	NLGN2	Q8NFZ4	835 aa		13.68	□□□□□ -0.22
NEPRO-222	ENST00000494891	HEG1	Q9ULI3	1381 aa		13.68	□□□□□ -0.22
NEPRO-222	ENST00000494891	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.67	□□□□□ -0.22
NEPRO-222	ENST00000494891	RTF1	Q92541	710 aa	Known RBP	13.67	□□□□□ -0.22
NEPRO-222	ENST00000494891	ZNF496	Q96IT1	587 aa	Predicted RBP	13.67	□□□□□ -0.22
NEPRO-222	ENST00000494891	STARD3NL	O95772	234 aa		13.66	□□□□□ -0.22
NEPRO-222	ENST00000494891	NEFM	P07197	916 aa		13.66	□□□□□ -0.22
NEPRO-222	ENST00000494891	MMP10	P09238	476 aa		13.66	□□□□□ -0.22
NEPRO-222	ENST00000494891	FMNL2	Q96PY5	1086 aa		13.66	□□□□□ -0.22
NEPRO-222	ENST00000494891	DLG5	Q8TDM6	1919 aa		13.66	□□□□□ -0.22
NEPRO-222	ENST00000494891	BTBD11	A6QL63	1104 aa		13.65	□□□□□ -0.22
NEPRO-222	ENST00000494891	C10orf71	Q711Q0	1435 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	COL15A1	P39059	1388 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	GRIN3B	O60391	1043 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	YY1	P25490	414 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	EIF5	P55010	431 aa	Known RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms