RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 PHKG2P15735 406 aa22.02■■□□□ 1.12
COL4A2-209ENST00000494852 ATG3Q9NT62 314 aa22.01■■□□□ 1.11
COL4A2-209ENST00000494852 PLEKHG2Q9H7P9 1386 aa22■■□□□ 1.11
COL4A2-209ENST00000494852 MMP10P09238 476 aa22■■□□□ 1.11
COL4A2-209ENST00000494852 TGFB2P61812 414 aa22■■□□□ 1.11
COL4A2-209ENST00000494852 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
COL4A2-209ENST00000494852 PXDNLA1KZ92 1463 aa21.98■■□□□ 1.11
COL4A2-209ENST00000494852 TRAPPC3LQ5T215 181 aa21.98■■□□□ 1.11
COL4A2-209ENST00000494852 NLGN1Q8N2Q7 840 aa21.98■■□□□ 1.11
COL4A2-209ENST00000494852 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
COL4A2-209ENST00000494852 RTCBQ9Y3I0 505 aaKnown RBP21.97■■□□□ 1.11
COL4A2-209ENST00000494852 KDRP35968 1356 aa21.97■■□□□ 1.11
COL4A2-209ENST00000494852 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
COL4A2-209ENST00000494852 KIAA1551Q9HCM1 1747 aa21.95■■□□□ 1.1
COL4A2-209ENST00000494852 ERVV-2B6SEH9 535 aa21.95■■□□□ 1.1
COL4A2-209ENST00000494852 ADRA2BP18089 450 aa21.95■■□□□ 1.1
COL4A2-209ENST00000494852 RC3H1Q5TC82 1133 aaKnown RBP21.95■■□□□ 1.1
COL4A2-209ENST00000494852 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
COL4A2-209ENST00000494852 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
COL4A2-209ENST00000494852 APLP1P51693 650 aa21.93■■□□□ 1.1
COL4A2-209ENST00000494852 EIF4A2Q14240 407 aaKnown RBP21.93■■□□□ 1.1
COL4A2-209ENST00000494852 SLC4A9Q96Q91 983 aa21.93■■□□□ 1.1
COL4A2-209ENST00000494852 BCS1LQ9Y276 419 aa21.93■■□□□ 1.1
COL4A2-209ENST00000494852 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
COL4A2-209ENST00000494852 TOMM70O94826 608 aa21.92■■□□□ 1.1
COL4A2-209ENST00000494852 HSP90AB1P08238 724 aaKnown RBP21.92■■□□□ 1.1
COL4A2-209ENST00000494852 ARHGEF1Q92888 912 aaKnown RBP21.92■■□□□ 1.1
COL4A2-209ENST00000494852 DCAF5Q96JK2 942 aa21.92■■□□□ 1.1
COL4A2-209ENST00000494852 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
COL4A2-209ENST00000494852 CNTNAP4Q9C0A0 1308 aa21.91■■□□□ 1.1
COL4A2-209ENST00000494852 CCDC87Q9NVE4 849 aa21.91■■□□□ 1.1
COL4A2-209ENST00000494852 RPS6KA4O75676 772 aa21.9■■□□□ 1.1
COL4A2-209ENST00000494852 GYS1P13807 737 aa21.9■■□□□ 1.1
COL4A2-209ENST00000494852 RBM42Q9BTD8 480 aaKnown RBP21.9■■□□□ 1.1
COL4A2-209ENST00000494852 RFC4P35249 363 aa21.89■■□□□ 1.09
COL4A2-209ENST00000494852 ARHGAP27Q6ZUM4 889 aa21.89■■□□□ 1.09
COL4A2-209ENST00000494852 C4AP0C0L4 1744 aa21.89■■□□□ 1.09
COL4A2-209ENST00000494852 COL5A3P25940 1745 aaPredicted RBP21.89■■□□□ 1.09
COL4A2-209ENST00000494852 DPEP1P16444 411 aa21.88■■□□□ 1.09
COL4A2-209ENST00000494852 PARP3Q9Y6F1 533 aa21.88■■□□□ 1.09
COL4A2-209ENST00000494852 FCHSD2O94868 740 aa21.87■■□□□ 1.09
COL4A2-209ENST00000494852 PLEKHO1Q53GL0 409 aaPredicted RBP21.87■■□□□ 1.09
COL4A2-209ENST00000494852 DNAJC5GQ8N7S2 189 aa21.87■■□□□ 1.09
COL4A2-209ENST00000494852 KCNA3P22001 575 aa21.85■■□□□ 1.09
COL4A2-209ENST00000494852 TNNT2P45379 298 aaPredicted RBP21.85■■□□□ 1.09
COL4A2-209ENST00000494852 CABP4P57796 275 aa21.85■■□□□ 1.09
COL4A2-209ENST00000494852 AMOTQ4VCS5 1084 aa21.85■■□□□ 1.09
COL4A2-209ENST00000494852 BRCA1P38398 1863 aaKnown RBP21.85■■□□□ 1.09
COL4A2-209ENST00000494852 KDM6AO15550 1401 aaPredicted RBP21.84■■□□□ 1.09
COL4A2-209ENST00000494852 NMRK2Q9NPI5 230 aa21.84■■□□□ 1.09
COL4A2-209ENST00000494852 TIMELESSQ9UNS1 1208 aa21.84■■□□□ 1.09
COL4A2-209ENST00000494852 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
COL4A2-209ENST00000494852 ZNF530Q6P9A1 599 aaPredicted RBP21.82■■□□□ 1.08
COL4A2-209ENST00000494852 RBM46Q8TBY0 533 aaKnown RBP21.82■■□□□ 1.08
COL4A2-209ENST00000494852 PIM2Q9P1W9 311 aa21.82■■□□□ 1.08
COL4A2-209ENST00000494852 MYH14Q7Z406 1995 aaKnown RBP21.81■■□□□ 1.08
COL4A2-209ENST00000494852 ARFGEF1Q9Y6D6 1849 aa21.81■■□□□ 1.08
COL4A2-209ENST00000494852 MTHFSP49914 203 aa21.81■■□□□ 1.08
COL4A2-209ENST00000494852 C9orf131Q5VYM1 1079 aa21.81■■□□□ 1.08
COL4A2-209ENST00000494852 CRKLP46109 303 aaKnown RBP21.8■■□□□ 1.08
COL4A2-209ENST00000494852 PTCD1O75127 700 aaKnown RBP21.79■■□□□ 1.08
COL4A2-209ENST00000494852 DALRD3Q5D0E6 543 aaKnown RBP21.79■■□□□ 1.08
COL4A2-209ENST00000494852 USP42Q9H9J4 1324 aaKnown RBP21.79■■□□□ 1.08
COL4A2-209ENST00000494852 C1orf141Q5JVX7 400 aa21.78■■□□□ 1.08
COL4A2-209ENST00000494852 C16orf71Q8IYS4 520 aaPredicted RBP21.78■■□□□ 1.08
COL4A2-209ENST00000494852 NFATC2IPQ8NCF5 419 aa21.78■■□□□ 1.08
COL4A2-209ENST00000494852 FSTL1Q12841 308 aa21.77■■□□□ 1.08
COL4A2-209ENST00000494852 FKBP8Q14318 412 aa21.77■■□□□ 1.08
COL4A2-209ENST00000494852 POLR3GLQ9BT43 218 aa21.77■■□□□ 1.08
COL4A2-209ENST00000494852 SRP68Q9UHB9 627 aaKnown RBP21.77■■□□□ 1.08
COL4A2-209ENST00000494852 KDM2BQ8NHM5 1336 aa21.77■■□□□ 1.07
COL4A2-209ENST00000494852 DDR1Q08345 913 aa21.76■■□□□ 1.07
COL4A2-209ENST00000494852 WDR90Q96KV7 1748 aa21.75■■□□□ 1.07
COL4A2-209ENST00000494852 TM4SF1P30408 202 aa21.74■■□□□ 1.07
COL4A2-209ENST00000494852 AEBP1Q8IUX7 1158 aa21.74■■□□□ 1.07
COL4A2-209ENST00000494852 PANK3Q9H999 370 aa21.74■■□□□ 1.07
COL4A2-209ENST00000494852 TJP1Q07157 1748 aa21.73■■□□□ 1.07
COL4A2-209ENST00000494852 INTS5Q6P9B9 1019 aaKnown RBP21.73■■□□□ 1.07
COL4A2-209ENST00000494852 RNF181Q9P0P0 153 aa21.73■■□□□ 1.07
COL4A2-209ENST00000494852 KCPQ6ZWJ8 1503 aa21.73■■□□□ 1.07
COL4A2-209ENST00000494852 POLRMTO00411 1230 aaKnown RBP21.72■■□□□ 1.07
COL4A2-209ENST00000494852 KLRG1Q96E93 195 aa21.72■■□□□ 1.07
COL4A2-209ENST00000494852 CHRNA5P30532 468 aa21.71■■□□□ 1.07
COL4A2-209ENST00000494852 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
COL4A2-209ENST00000494852 JMYQ8N9B5 988 aa21.71■■□□□ 1.07
COL4A2-209ENST00000494852 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
COL4A2-209ENST00000494852 ZPR1O75312 459 aa21.7■■□□□ 1.06
COL4A2-209ENST00000494852 MORC1Q86VD1 984 aa21.7■■□□□ 1.06
COL4A2-209ENST00000494852 RRAGCQ9HB90 399 aa21.7■■□□□ 1.06
COL4A2-209ENST00000494852 CCER1Q8TC90 406 aaPredicted RBP21.69■■□□□ 1.06
COL4A2-209ENST00000494852 IL13P35225 146 aa21.68■■□□□ 1.06
COL4A2-209ENST00000494852 HTRA3P83110 453 aa21.68■■□□□ 1.06
COL4A2-209ENST00000494852 AKAP4Q5JQC9 854 aa21.68■■□□□ 1.06
COL4A2-209ENST00000494852 USPL1Q5W0Q7 1092 aa21.68■■□□□ 1.06
COL4A2-209ENST00000494852 ZC3H4Q9UPT8 1303 aaKnown RBP21.68■■□□□ 1.06
COL4A2-209ENST00000494852 TNRC6CQ9HCJ0 1690 aaKnown RBP21.68■■□□□ 1.06
COL4A2-209ENST00000494852 SCN11AQ9UI33 1791 aa21.68■■□□□ 1.06
COL4A2-209ENST00000494852 SBF1O95248 1867 aa21.68■■□□□ 1.06
COL4A2-209ENST00000494852 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
COL4A2-209ENST00000494852 DNAJC10Q8IXB1 793 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms