RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 COL16A1Q07092 1604 aaPredicted RBP8.72□□□□□ -1.01
MSH5-217ENST00000494458 MEGF6O75095 1541 aa8.72□□□□□ -1.01
MSH5-217ENST00000494458 TOM1O60784 492 aa8.72□□□□□ -1.01
MSH5-217ENST00000494458 HOXB7P09629 217 aa8.72□□□□□ -1.01
MSH5-217ENST00000494458 CHRNA2Q15822 529 aa8.72□□□□□ -1.01
MSH5-217ENST00000494458 PRDM11Q9NQV5 511 aa8.72□□□□□ -1.01
MSH5-217ENST00000494458 SMC4Q9NTJ3 1288 aa8.72□□□□□ -1.01
MSH5-217ENST00000494458 NOB1Q9ULX3 412 aaKnown RBP8.72□□□□□ -1.01
MSH5-217ENST00000494458 PKD1L3Q7Z443 1732 aa8.71□□□□□ -1.01
MSH5-217ENST00000494458 PRR29P0C7W0 189 aa8.71□□□□□ -1.02
MSH5-217ENST00000494458 PHKG2P15735 406 aa8.71□□□□□ -1.02
MSH5-217ENST00000494458 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
MSH5-217ENST00000494458 MVPQ14764 893 aaKnown RBP8.71□□□□□ -1.02
MSH5-217ENST00000494458 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.02
MSH5-217ENST00000494458 DZIP1LQ8IYY4 767 aaKnown RBP8.71□□□□□ -1.02
MSH5-217ENST00000494458 PANK1Q8TE04 598 aa8.71□□□□□ -1.02
MSH5-217ENST00000494458 CCDC136Q96JN2 1154 aa8.71□□□□□ -1.02
MSH5-217ENST00000494458 NLRP2Q9NX02 1062 aa8.71□□□□□ -1.02
MSH5-217ENST00000494458 SPG7Q9UQ90 795 aa8.71□□□□□ -1.02
MSH5-217ENST00000494458 ABCC4O15439 1325 aa8.71□□□□□ -1.02
MSH5-217ENST00000494458 MRC1P22897 1456 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 CYP27B1O15528 508 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 CD44P16070 742 aaKnown RBP8.7□□□□□ -1.02
MSH5-217ENST00000494458 EIF4A1P60842 406 aaKnown RBP8.7□□□□□ -1.02
MSH5-217ENST00000494458 RAPGEF4Q8WZA2 1011 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 CLUAP1Q96AJ1 413 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 BCL2L13Q9BXK5 485 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 TSPYL4Q9UJ04 414 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 TNNQ9UQP3 1299 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 LAS1LQ9Y4W2 734 aaKnown RBP8.7□□□□□ -1.02
MSH5-217ENST00000494458 SIPA1L3O60292 1781 aaPredicted RBP8.7□□□□□ -1.02
MSH5-217ENST00000494458 DISP2A7MBM2 1401 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 RGS12O14924 1447 aa8.7□□□□□ -1.02
MSH5-217ENST00000494458 KDM6AO15550 1401 aaPredicted RBP8.7□□□□□ -1.02
MSH5-217ENST00000494458 COL14A1Q05707 1796 aaKnown RBP8.69□□□□□ -1.02
MSH5-217ENST00000494458 KDM3BQ7LBC6 1761 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
MSH5-217ENST00000494458 KRT24Q2M2I5 525 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 INTS3Q68E01 1043 aaKnown RBP8.69□□□□□ -1.02
MSH5-217ENST00000494458 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 DCAF5Q96JK2 942 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 ZBTB40Q9NUA8 1239 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 MIS18AQ9NYP9 233 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 PTPRCP08575 1304 aa8.69□□□□□ -1.02
MSH5-217ENST00000494458 ZBTB7CA1YPR0 619 aa8.68□□□□□ -1.02
MSH5-217ENST00000494458 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
MSH5-217ENST00000494458 C1orf141Q5JVX7 400 aa8.68□□□□□ -1.02
MSH5-217ENST00000494458 LARP1Q6PKG0 1096 aaKnown RBP8.68□□□□□ -1.02
MSH5-217ENST00000494458 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
MSH5-217ENST00000494458 FRAT1Q92837 279 aaPredicted RBP8.68□□□□□ -1.02
MSH5-217ENST00000494458 API5Q9BZZ5 524 aaKnown RBP8.68□□□□□ -1.02
MSH5-217ENST00000494458 SLC52A2Q9HAB3 445 aa8.68□□□□□ -1.02
MSH5-217ENST00000494458 DDX19BQ9UMR2 479 aa8.68□□□□□ -1.02
MSH5-217ENST00000494458 ELL2O00472 640 aaPredicted RBP8.67□□□□□ -1.02
MSH5-217ENST00000494458 IL2RBP14784 551 aa8.67□□□□□ -1.02
MSH5-217ENST00000494458 CENPQQ7L2Z9 268 aaPredicted RBP8.67□□□□□ -1.02
MSH5-217ENST00000494458 PELP1Q8IZL8 1130 aaKnown RBP8.67□□□□□ -1.02
MSH5-217ENST00000494458 TMEM57Q8N5G2 664 aa8.67□□□□□ -1.02
MSH5-217ENST00000494458 ZCRB1Q8TBF4 217 aaKnown RBP8.67□□□□□ -1.02
MSH5-217ENST00000494458 IBTKQ9P2D0 1353 aaPredicted RBP8.67□□□□□ -1.02
MSH5-217ENST00000494458 PARP4Q9UKK3 1724 aaKnown RBP8.67□□□□□ -1.02
MSH5-217ENST00000494458 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
MSH5-217ENST00000494458 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
MSH5-217ENST00000494458 SCN11AQ9UI33 1791 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 SLIT2O94813 1529 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 BTBD11A6QL63 1104 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 ERVV-2B6SEH9 535 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 GIGYF1O75420 1035 aaPredicted RBP8.66□□□□□ -1.02
MSH5-217ENST00000494458 IGHDP01880 384 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 CSB-PGBD3P0DP91 1061 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 HDAC1Q13547 482 aaPredicted RBP8.66□□□□□ -1.02
MSH5-217ENST00000494458 CCDC30Q5VVM6 783 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 TOM1L2Q6ZVM7 507 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 PHLPP1O60346 1717 aa8.66□□□□□ -1.02
MSH5-217ENST00000494458 PCDH11XQ9BZA7 1347 aa8.65□□□□□ -1.02
MSH5-217ENST00000494458 PCDH11YQ9BZA8 1340 aa8.65□□□□□ -1.02
MSH5-217ENST00000494458 CACNA1FO60840 1977 aa8.65□□□□□ -1.02
MSH5-217ENST00000494458 KCNQ3O43525 872 aa8.65□□□□□ -1.02
MSH5-217ENST00000494458 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
MSH5-217ENST00000494458 TEFQ10587 303 aa8.65□□□□□ -1.02
MSH5-217ENST00000494458 CERKQ8TCT0 537 aa8.65□□□□□ -1.02
MSH5-217ENST00000494458 CHMP4BQ9H444 224 aaKnown RBP8.65□□□□□ -1.02
MSH5-217ENST00000494458 BTG4Q9NY30 223 aa8.65□□□□□ -1.02
MSH5-217ENST00000494458 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
MSH5-217ENST00000494458 SHANK3Q9BYB0 1731 aa8.64□□□□□ -1.03
MSH5-217ENST00000494458 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
MSH5-217ENST00000494458 ZNF790Q6PG37 636 aa8.64□□□□□ -1.03
MSH5-217ENST00000494458 FTSJ3Q8IY81 847 aaKnown RBP8.64□□□□□ -1.03
MSH5-217ENST00000494458 OTUD5Q96G74 571 aa8.64□□□□□ -1.03
MSH5-217ENST00000494458 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
MSH5-217ENST00000494458 NRAPQ86VF7 1730 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 JCADQ9P266 1359 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 PLCH1Q4KWH8 1693 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 EVA1CP58658 441 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 BARGINQ6ZT62 677 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 G2E3Q7L622 706 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 LRP10Q7Z4F1 713 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 FNBP4Q8N3X1 1017 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms